RNA–Protein interactions for RNA: ENST00000549119.1

RNF41-207, Transcript of ring finger protein 41, humanhuman

TSL 5

Gene RNF41, Length 796 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41-207ENST00000549119 TOM1L2Q6ZVM7 507 aa11.94□□□□□ -0.5
RNF41-207ENST00000549119 THUMPD2Q9BTF0 503 aaKnown RBP11.94□□□□□ -0.5
RNF41-207ENST00000549119 COL18A1P39060 1754 aa11.94□□□□□ -0.5
RNF41-207ENST00000549119 PHLPP1O60346 1717 aa11.94□□□□□ -0.5
RNF41-207ENST00000549119 MAP3K5Q99683 1374 aa11.93□□□□□ -0.5
RNF41-207ENST00000549119 PLEKHG2Q9H7P9 1386 aa11.93□□□□□ -0.5
RNF41-207ENST00000549119 ZNF853P0CG23 659 aa11.93□□□□□ -0.5
RNF41-207ENST00000549119 EXOSC9Q06265 439 aaKnown RBP11.93□□□□□ -0.5
RNF41-207ENST00000549119 DCTN1Q14203 1278 aa11.93□□□□□ -0.5
RNF41-207ENST00000549119 C1orf141Q5JVX7 400 aa11.93□□□□□ -0.5
RNF41-207ENST00000549119 MCM10Q7L590 875 aa11.93□□□□□ -0.5
RNF41-207ENST00000549119 TSR2Q969E8 191 aaKnown RBP11.93□□□□□ -0.5
RNF41-207ENST00000549119 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.93□□□□□ -0.5
RNF41-207ENST00000549119 SPG7Q9UQ90 795 aa11.93□□□□□ -0.5
RNF41-207ENST00000549119 COL22A1Q8NFW1 1626 aaPredicted RBP11.93□□□□□ -0.5
RNF41-207ENST00000549119 ZNF530Q6P9A1 599 aaPredicted RBP11.92□□□□□ -0.5
RNF41-207ENST00000549119 ZNF428Q96B54 188 aa11.92□□□□□ -0.5
RNF41-207ENST00000549119 CARD10Q9BWT7 1032 aa11.92□□□□□ -0.5
RNF41-207ENST00000549119 STRN4Q9NRL3 753 aa11.92□□□□□ -0.5
RNF41-207ENST00000549119 FAM208AQ9UK61 1670 aaKnown RBP11.91□□□□□ -0.5
RNF41-207ENST00000549119 CAMTA1Q9Y6Y1 1673 aa11.91□□□□□ -0.5
RNF41-207ENST00000549119 COL16A1Q07092 1604 aaPredicted RBP11.91□□□□□ -0.5
RNF41-207ENST00000549119 CHL1O00533 1208 aa11.91□□□□□ -0.5
RNF41-207ENST00000549119 MBIPQ9NS73 344 aa11.91□□□□□ -0.5
RNF41-207ENST00000549119 BABAM1Q9NWV8 329 aa11.91□□□□□ -0.5
RNF41-207ENST00000549119 BTG4Q9NY30 223 aa11.91□□□□□ -0.5
RNF41-207ENST00000549119 ABCA3Q99758 1704 aa11.91□□□□□ -0.5
RNF41-207ENST00000549119 COL5A2P05997 1499 aaPredicted RBP11.9□□□□□ -0.5
RNF41-207ENST00000549119 IRX6P78412 446 aaPredicted RBP11.9□□□□□ -0.5
RNF41-207ENST00000549119 LMO7Q8WWI1 1683 aa11.9□□□□□ -0.5
RNF41-207ENST00000549119 JCADQ9P266 1359 aa11.9□□□□□ -0.5
RNF41-207ENST00000549119 RGPD5Q99666 1765 aa11.9□□□□□ -0.51
RNF41-207ENST00000549119 CRB1P82279 1406 aa11.89□□□□□ -0.51
RNF41-207ENST00000549119 NUTM2BA6NNL0 878 aaPredicted RBP11.89□□□□□ -0.51
RNF41-207ENST00000549119 NUTM2EB1AL46 878 aaPredicted RBP11.89□□□□□ -0.51
RNF41-207ENST00000549119 RARSP54136 660 aaKnown RBP11.89□□□□□ -0.51
RNF41-207ENST00000549119 TAF7Q15545 349 aaPredicted RBP11.89□□□□□ -0.51
RNF41-207ENST00000549119 NUTM2AQ8IVF1 878 aaPredicted RBP11.89□□□□□ -0.51
RNF41-207ENST00000549119 IL17REQ8NFR9 667 aa11.89□□□□□ -0.51
RNF41-207ENST00000549119 DLG5Q8TDM6 1919 aa11.88□□□□□ -0.51
RNF41-207ENST00000549119 RGPD2P0DJD1 1756 aa11.88□□□□□ -0.51
RNF41-207ENST00000549119 COL14A1Q05707 1796 aaKnown RBP11.88□□□□□ -0.51
RNF41-207ENST00000549119 ADAMTS2O95450 1211 aa11.88□□□□□ -0.51
RNF41-207ENST00000549119 HSP90AB1P08238 724 aaKnown RBP11.88□□□□□ -0.51
RNF41-207ENST00000549119 IL2RBP14784 551 aa11.88□□□□□ -0.51
RNF41-207ENST00000549119 CANXP27824 592 aaKnown RBP11.88□□□□□ -0.51
RNF41-207ENST00000549119 LARP1Q6PKG0 1096 aaKnown RBP11.88□□□□□ -0.51
RNF41-207ENST00000549119 IFNL2Q8IZJ0 200 aa11.88□□□□□ -0.51
RNF41-207ENST00000549119 TSPYL4Q9UJ04 414 aa11.88□□□□□ -0.51
RNF41-207ENST00000549119 RNMTO43148 476 aaKnown RBP11.87□□□□□ -0.51
RNF41-207ENST00000549119 BCAR3O75815 825 aa11.87□□□□□ -0.51
RNF41-207ENST00000549119 TEFQ10587 303 aa11.87□□□□□ -0.51
RNF41-207ENST00000549119 ALDH1L2Q3SY69 923 aa11.87□□□□□ -0.51
RNF41-207ENST00000549119 SPATA31A6Q5VVP1 1343 aa11.86□□□□□ -0.51
RNF41-207ENST00000549119 PLIN1O60240 522 aa11.86□□□□□ -0.51
RNF41-207ENST00000549119 VAMP4O75379 141 aa11.86□□□□□ -0.51
RNF41-207ENST00000549119 MS4A1P11836 297 aa11.86□□□□□ -0.51
RNF41-207ENST00000549119 TWISTNBQ3B726 338 aaPredicted RBP11.86□□□□□ -0.51
RNF41-207ENST00000549119 MPRIPQ6WCQ1 1025 aa11.86□□□□□ -0.51
RNF41-207ENST00000549119 ZCRB1Q8TBF4 217 aaKnown RBP11.86□□□□□ -0.51
RNF41-207ENST00000549119 PPP4R2Q9NY27 417 aa11.86□□□□□ -0.51
RNF41-207ENST00000549119 CEMIPQ8WUJ3 1361 aa11.86□□□□□ -0.51
RNF41-207ENST00000549119 PHKG2P15735 406 aa11.85□□□□□ -0.51
RNF41-207ENST00000549119 CHMP4AQ9BY43 222 aa11.85□□□□□ -0.51
RNF41-207ENST00000549119 LGR6Q9HBX8 967 aa11.85□□□□□ -0.51
RNF41-207ENST00000549119 SMC4Q9NTJ3 1288 aa11.85□□□□□ -0.51
RNF41-207ENST00000549119 OVOS2A0A0G2JMS6 1433 aa11.85□□□□□ -0.51
RNF41-207ENST00000549119 SOS1Q07889 1333 aaPredicted RBP11.85□□□□□ -0.51
RNF41-207ENST00000549119 ELL2O00472 640 aaPredicted RBP11.84□□□□□ -0.51
RNF41-207ENST00000549119 IPO8O15397 1037 aaKnown RBP11.84□□□□□ -0.51
RNF41-207ENST00000549119 PDE3AQ14432 1141 aa11.84□□□□□ -0.51
RNF41-207ENST00000549119 C8orf58Q8NAV2 365 aa11.84□□□□□ -0.51
RNF41-207ENST00000549119 FRAT1Q92837 279 aaPredicted RBP11.84□□□□□ -0.51
RNF41-207ENST00000549119 DCAF5Q96JK2 942 aa11.84□□□□□ -0.51
RNF41-207ENST00000549119 CDCA7Q9BWT1 371 aaPredicted RBP11.84□□□□□ -0.51
RNF41-207ENST00000549119 MIS18AQ9NYP9 233 aa11.84□□□□□ -0.51
RNF41-207ENST00000549119 MEGF6O75095 1541 aa11.84□□□□□ -0.51
RNF41-207ENST00000549119 PCDH11XQ9BZA7 1347 aa11.84□□□□□ -0.51
RNF41-207ENST00000549119 PCDH11YQ9BZA8 1340 aa11.84□□□□□ -0.51
RNF41-207ENST00000549119 BTBD11A6QL63 1104 aa11.83□□□□□ -0.52
RNF41-207ENST00000549119 BRPF1P55201 1214 aaPredicted RBP11.83□□□□□ -0.52
RNF41-207ENST00000549119 ZKSCAN2Q63HK3 967 aa11.83□□□□□ -0.52
RNF41-207ENST00000549119 TSPYL6Q8N831 410 aa11.83□□□□□ -0.52
RNF41-207ENST00000549119 SSH1Q8WYL5 1049 aa11.83□□□□□ -0.52
RNF41-207ENST00000549119 USP35Q9P2H5 1018 aa11.83□□□□□ -0.52
RNF41-207ENST00000549119 THRAP3Q9Y2W1 955 aaKnown RBP11.83□□□□□ -0.52
RNF41-207ENST00000549119 KIF16BQ96L93 1317 aa11.83□□□□□ -0.52
RNF41-207ENST00000549119 NGLY1Q96IV0 654 aa11.82□□□□□ -0.52
RNF41-207ENST00000549119 BCL2L13Q9BXK5 485 aa11.82□□□□□ -0.52
RNF41-207ENST00000549119 CYP27B1O15528 508 aa11.81□□□□□ -0.52
RNF41-207ENST00000549119 PARP4Q9UKK3 1724 aaKnown RBP11.8□□□□□ -0.52
RNF41-207ENST00000549119 LRRC37A3O60309 1634 aa11.8□□□□□ -0.52
RNF41-207ENST00000549119 EXOC5O00471 708 aa11.8□□□□□ -0.52
RNF41-207ENST00000549119 CABP4P57796 275 aa11.8□□□□□ -0.52
RNF41-207ENST00000549119 NKX1-1Q15270 411 aaPredicted RBP11.8□□□□□ -0.52
RNF41-207ENST00000549119 UNC5CLQ8IV45 518 aa11.8□□□□□ -0.52
RNF41-207ENST00000549119 MRPL50Q8N5N7 158 aaKnown RBP11.8□□□□□ -0.52
RNF41-207ENST00000549119 EXOC6Q8TAG9 804 aa11.8□□□□□ -0.52
RNF41-207ENST00000549119 DDX54Q8TDD1 881 aaKnown RBP11.8□□□□□ -0.52
RNF41-207ENST00000549119 ARHGAP45Q92619 1136 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 92.9 ms