RNA–Protein interactions for RNA: ENST00000549039.5

CTDSP2-205, Transcript of CTD small phosphatase 2, humanhuman

TSL 2

Gene CTDSP2, Length 797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP2-205ENST00000549039 NBPF4Q96M43 638 aa16.92■□□□□ 0.3
CTDSP2-205ENST00000549039 TFCP2L1Q9NZI6 479 aa16.92■□□□□ 0.3
CTDSP2-205ENST00000549039 SMG6Q86US8 1419 aaKnown RBP16.92■□□□□ 0.3
CTDSP2-205ENST00000549039 RTL1A6NKG5 1358 aa16.91■□□□□ 0.3
CTDSP2-205ENST00000549039 SGIP1Q9BQI5 828 aa16.91■□□□□ 0.3
CTDSP2-205ENST00000549039 AKT1S1Q96B36 256 aa16.9■□□□□ 0.3
CTDSP2-205ENST00000549039 BTAF1O14981 1849 aa16.9■□□□□ 0.3
CTDSP2-205ENST00000549039 MEGF6O75095 1541 aa16.9■□□□□ 0.3
CTDSP2-205ENST00000549039 TATP17735 454 aaPredicted RBP16.89■□□□□ 0.29
CTDSP2-205ENST00000549039 POLD1P28340 1107 aa16.89■□□□□ 0.29
CTDSP2-205ENST00000549039 HSP90AB2PQ58FF8 381 aa16.89■□□□□ 0.29
CTDSP2-205ENST00000549039 CCNL1Q9UK58 526 aaPredicted RBP16.89■□□□□ 0.29
CTDSP2-205ENST00000549039 FAM208AQ9UK61 1670 aaKnown RBP16.88■□□□□ 0.29
CTDSP2-205ENST00000549039 MSH5O43196 834 aa16.88■□□□□ 0.29
CTDSP2-205ENST00000549039 PAPPAQ13219 1627 aa16.88■□□□□ 0.29
CTDSP2-205ENST00000549039 PPM1GO15355 546 aaPredicted RBP16.87■□□□□ 0.29
CTDSP2-205ENST00000549039 CGNL1Q0VF96 1302 aa16.87■□□□□ 0.29
CTDSP2-205ENST00000549039 PNPLA7Q6ZV29 1317 aa16.87■□□□□ 0.29
CTDSP2-205ENST00000549039 SLC16A10Q8TF71 515 aa16.86■□□□□ 0.29
CTDSP2-205ENST00000549039 POLR3GLQ9BT43 218 aa16.86■□□□□ 0.29
CTDSP2-205ENST00000549039 FLT4P35916 1363 aa16.86■□□□□ 0.29
CTDSP2-205ENST00000549039 GPR162Q16538 588 aa16.85■□□□□ 0.29
CTDSP2-205ENST00000549039 PELP1Q8IZL8 1130 aaKnown RBP16.85■□□□□ 0.29
CTDSP2-205ENST00000549039 NSD2O96028 1365 aa16.85■□□□□ 0.29
CTDSP2-205ENST00000549039 CARD14Q9BXL6 1004 aa16.84■□□□□ 0.29
CTDSP2-205ENST00000549039 PCGF6Q9BYE7 350 aa16.84■□□□□ 0.29
CTDSP2-205ENST00000549039 EMILIN1Q9Y6C2 1016 aa16.84■□□□□ 0.29
CTDSP2-205ENST00000549039 PCDH11XQ9BZA7 1347 aa16.84■□□□□ 0.29
CTDSP2-205ENST00000549039 PCDH11YQ9BZA8 1340 aa16.84■□□□□ 0.29
CTDSP2-205ENST00000549039 INSRP06213 1382 aa16.84■□□□□ 0.29
CTDSP2-205ENST00000549039 NSD3Q9BZ95 1437 aa16.84■□□□□ 0.29
CTDSP2-205ENST00000549039 MPRIPQ6WCQ1 1025 aa16.83■□□□□ 0.28
CTDSP2-205ENST00000549039 DOT1LQ8TEK3 1739 aa16.82■□□□□ 0.28
CTDSP2-205ENST00000549039 GOLGB1Q14789 3259 aaKnown RBP16.81■□□□□ 0.28
CTDSP2-205ENST00000549039 KAT6BQ8WYB5 2073 aa16.81■□□□□ 0.28
CTDSP2-205ENST00000549039 KIF24Q5T7B8 1368 aa16.81■□□□□ 0.28
CTDSP2-205ENST00000549039 ZNF784Q8NCA9 323 aaPredicted RBP16.81■□□□□ 0.28
CTDSP2-205ENST00000549039 MAP3K5Q99683 1374 aa16.8■□□□□ 0.28
CTDSP2-205ENST00000549039 RGPD2P0DJD1 1756 aa16.8■□□□□ 0.28
CTDSP2-205ENST00000549039 COL23A1Q86Y22 540 aaPredicted RBP16.79■□□□□ 0.28
CTDSP2-205ENST00000549039 TIMELESSQ9UNS1 1208 aa16.79■□□□□ 0.28
CTDSP2-205ENST00000549039 CYP27B1O15528 508 aa16.78■□□□□ 0.28
CTDSP2-205ENST00000549039 MSL1Q68DK7 614 aa16.78■□□□□ 0.28
CTDSP2-205ENST00000549039 PALLDQ8WX93 1383 aa16.77■□□□□ 0.28
CTDSP2-205ENST00000549039 SHANK3Q9BYB0 1731 aa16.77■□□□□ 0.28
CTDSP2-205ENST00000549039 TNNT2P45379 298 aaPredicted RBP16.77■□□□□ 0.28
CTDSP2-205ENST00000549039 NLGN2Q8NFZ4 835 aa16.77■□□□□ 0.28
CTDSP2-205ENST00000549039 SPG7Q9UQ90 795 aa16.77■□□□□ 0.28
CTDSP2-205ENST00000549039 HMGB2P26583 209 aaKnown RBP16.76■□□□□ 0.27
CTDSP2-205ENST00000549039 KIF20BQ96Q89 1820 aa16.75■□□□□ 0.27
CTDSP2-205ENST00000549039 SMARCC1Q92922 1105 aaPredicted RBP16.75■□□□□ 0.27
CTDSP2-205ENST00000549039 AK7Q96M32 723 aa16.75■□□□□ 0.27
CTDSP2-205ENST00000549039 WASHC2AQ641Q2 1341 aa16.74■□□□□ 0.27
CTDSP2-205ENST00000549039 LY75O60449 1722 aa16.73■□□□□ 0.27
CTDSP2-205ENST00000549039 PHF14O94880 888 aa16.73■□□□□ 0.27
CTDSP2-205ENST00000549039 FLAD1Q8NFF5 587 aa16.73■□□□□ 0.27
CTDSP2-205ENST00000549039 PIGBQ92521 554 aa16.73■□□□□ 0.27
CTDSP2-205ENST00000549039 EYA1Q99502 592 aa16.73■□□□□ 0.27
CTDSP2-205ENST00000549039 POLKQ9UBT6 870 aa16.72■□□□□ 0.27
CTDSP2-205ENST00000549039 TMOD3Q9NYL9 352 aa16.71■□□□□ 0.27
CTDSP2-205ENST00000549039 CLSPNQ9HAW4 1339 aa16.7■□□□□ 0.26
CTDSP2-205ENST00000549039 QSER1Q2KHR3 1735 aa16.7■□□□□ 0.26
CTDSP2-205ENST00000549039 EIF4G2P78344 907 aaKnown RBP eCLIP16.7■□□□□ 0.265e-13■■□□□ 11.6
CTDSP2-205ENST00000549039 NKX1-1Q15270 411 aaPredicted RBP16.7■□□□□ 0.26
CTDSP2-205ENST00000549039 IFNL2Q8IZJ0 200 aa16.7■□□□□ 0.26
CTDSP2-205ENST00000549039 GRIN3BO60391 1043 aa16.69■□□□□ 0.26
CTDSP2-205ENST00000549039 EIF4A2Q14240 407 aaKnown RBP16.69■□□□□ 0.26
CTDSP2-205ENST00000549039 SMIM5Q71RC9 77 aa16.69■□□□□ 0.26
CTDSP2-205ENST00000549039 TUBGCP6Q96RT7 1819 aa16.68■□□□□ 0.26
CTDSP2-205ENST00000549039 LOC102724428A0A0B4J2F2 783 aa16.68■□□□□ 0.26
CTDSP2-205ENST00000549039 PHKG2P15735 406 aa16.68■□□□□ 0.26
CTDSP2-205ENST00000549039 YBX3P16989 372 aaKnown RBP eCLIP16.68■□□□□ 0.262e-7■■■■□ 25
CTDSP2-205ENST00000549039 SIK1P57059 783 aa16.68■□□□□ 0.26
CTDSP2-205ENST00000549039 PANK3Q9H999 370 aa16.68■□□□□ 0.26
CTDSP2-205ENST00000549039 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.68■□□□□ 0.26
CTDSP2-205ENST00000549039 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.67■□□□□ 0.26
CTDSP2-205ENST00000549039 HSPA5P11021 654 aaKnown RBP16.67■□□□□ 0.26
CTDSP2-205ENST00000549039 ATP6V1AP38606 617 aa16.67■□□□□ 0.26
CTDSP2-205ENST00000549039 ASAP1Q9ULH1 1129 aa16.67■□□□□ 0.26
CTDSP2-205ENST00000549039 C5P01031 1676 aa16.66■□□□□ 0.26
CTDSP2-205ENST00000549039 SENP3-EIF4A1A0A087X0R7 540 aa16.66■□□□□ 0.26
CTDSP2-205ENST00000549039 NCAPD2Q15021 1401 aa16.66■□□□□ 0.26
CTDSP2-205ENST00000549039 AMIGO3Q86WK7 504 aa16.66■□□□□ 0.26
CTDSP2-205ENST00000549039 LINC00116Q8NCU8 138 aa16.66■□□□□ 0.26
CTDSP2-205ENST00000549039 CCER1Q8TC90 406 aaPredicted RBP16.66■□□□□ 0.26
CTDSP2-205ENST00000549039 CD2APQ9Y5K6 639 aa16.66■□□□□ 0.26
CTDSP2-205ENST00000549039 GNPATO15228 680 aa16.65■□□□□ 0.26
CTDSP2-205ENST00000549039 C1QTNF8P60827 252 aa16.65■□□□□ 0.26
CTDSP2-205ENST00000549039 TOGARAM1Q9Y4F4 1720 aa16.65■□□□□ 0.26
CTDSP2-205ENST00000549039 GIGYF1O75420 1035 aaPredicted RBP16.64■□□□□ 0.25
CTDSP2-205ENST00000549039 SSFA2P28290 1259 aa16.64■□□□□ 0.25
CTDSP2-205ENST00000549039 WWC3Q9ULE0 1092 aa16.64■□□□□ 0.25
CTDSP2-205ENST00000549039 PKD1L3Q7Z443 1732 aa16.64■□□□□ 0.25
CTDSP2-205ENST00000549039 C4BP0C0L5 1744 aa16.63■□□□□ 0.25
CTDSP2-205ENST00000549039 ITPK1Q13572 414 aa16.63■□□□□ 0.25
CTDSP2-205ENST00000549039 MORC1Q86VD1 984 aa16.63■□□□□ 0.25
CTDSP2-205ENST00000549039 ATG3Q9NT62 314 aa16.63■□□□□ 0.25
CTDSP2-205ENST00000549039 COL24A1Q17RW2 1714 aa16.62■□□□□ 0.25
CTDSP2-205ENST00000549039 PLEKHO1Q53GL0 409 aaPredicted RBP16.62■□□□□ 0.25
CTDSP2-205ENST00000549039 RBM42Q9BTD8 480 aaKnown RBP16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms