RNA–Protein interactions for RNA: ENST00000548979.1

SLC38A1-205, Transcript of solute carrier family 38 member 1, humanhuman

TSL 4

Gene SLC38A1, Length 543 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A1-205ENST00000548979 RPRD2Q5VT52 1461 aaKnown RBP12.57□□□□□ -0.4
SLC38A1-205ENST00000548979 LTBP4Q8N2S1 1624 aa12.56□□□□□ -0.4
SLC38A1-205ENST00000548979 S1PR4O95977 384 aa12.56□□□□□ -0.4
SLC38A1-205ENST00000548979 ADH1BP00325 375 aa12.56□□□□□ -0.4
SLC38A1-205ENST00000548979 ITGAEP38570 1179 aa12.56□□□□□ -0.4
SLC38A1-205ENST00000548979 BRICD5Q6PL45 260 aa12.56□□□□□ -0.4
SLC38A1-205ENST00000548979 SPSB2Q99619 263 aa12.56□□□□□ -0.4
SLC38A1-205ENST00000548979 MED14O60244 1454 aa12.56□□□□□ -0.4
SLC38A1-205ENST00000548979 ZNF335Q9H4Z2 1342 aaPredicted RBP12.56□□□□□ -0.4
SLC38A1-205ENST00000548979 NPHP4O75161 1426 aaPredicted RBP12.55□□□□□ -0.4
SLC38A1-205ENST00000548979 PPEF1O14829 653 aaPredicted RBP12.55□□□□□ -0.4
SLC38A1-205ENST00000548979 USP46P62068 366 aa12.55□□□□□ -0.4
SLC38A1-205ENST00000548979 IDI1Q13907 227 aa12.55□□□□□ -0.4
SLC38A1-205ENST00000548979 TXNDC2Q86VQ3 553 aa12.55□□□□□ -0.4
SLC38A1-205ENST00000548979 FAM160A2Q8N612 972 aaPredicted RBP12.55□□□□□ -0.4
SLC38A1-205ENST00000548979 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.55□□□□□ -0.4
SLC38A1-205ENST00000548979 PCDHGC3Q9UN70 934 aa12.55□□□□□ -0.4
SLC38A1-205ENST00000548979 CFAP65Q6ZU64 1925 aaKnown RBP12.54□□□□□ -0.4
SLC38A1-205ENST00000548979 RRBP1Q9P2E9 1410 aaKnown RBP12.54□□□□□ -0.4
SLC38A1-205ENST00000548979 MOXD2PA6NHM9 499 aa12.54□□□□□ -0.4
SLC38A1-205ENST00000548979 SYMPKQ92797 1274 aaKnown RBP12.54□□□□□ -0.4
SLC38A1-205ENST00000548979 TBC1D2Q9BYX2 928 aa12.54□□□□□ -0.4
SLC38A1-205ENST00000548979 NOS1P29475 1434 aa12.54□□□□□ -0.4
SLC38A1-205ENST00000548979 GRIPAP1Q4V328 841 aa12.53□□□□□ -0.4
SLC38A1-205ENST00000548979 KDM4CQ9H3R0 1056 aa12.53□□□□□ -0.4
SLC38A1-205ENST00000548979 PRDM9Q9NQV7 894 aa12.53□□□□□ -0.4
SLC38A1-205ENST00000548979 POLR1AO95602 1720 aaPredicted RBP12.53□□□□□ -0.4
SLC38A1-205ENST00000548979 EFCAB6Q5THR3 1501 aa12.52□□□□□ -0.4
SLC38A1-205ENST00000548979 RNF223E7ERA6 249 aa12.52□□□□□ -0.41
SLC38A1-205ENST00000548979 NUP155O75694 1391 aa12.52□□□□□ -0.41
SLC38A1-205ENST00000548979 SCAF11Q99590 1463 aaKnown RBP12.52□□□□□ -0.41
SLC38A1-205ENST00000548979 CPS1P31327 1500 aa12.52□□□□□ -0.41
SLC38A1-205ENST00000548979 FMNL1O95466 1100 aaPredicted RBP12.51□□□□□ -0.41
SLC38A1-205ENST00000548979 TMEM2Q9UHN6 1383 aa12.51□□□□□ -0.41
SLC38A1-205ENST00000548979 ARHGAP23Q9P227 1491 aa12.51□□□□□ -0.41
SLC38A1-205ENST00000548979 SLIT1O75093 1534 aa12.51□□□□□ -0.41
SLC38A1-205ENST00000548979 NEURL4Q96JN8 1562 aa12.51□□□□□ -0.41
SLC38A1-205ENST00000548979 SLC6A16Q9GZN6 736 aa12.5□□□□□ -0.41
SLC38A1-205ENST00000548979 SALL2Q9Y467 1007 aaPredicted RBP12.5□□□□□ -0.41
SLC38A1-205ENST00000548979 KDM5AP29375 1690 aaKnown RBP12.5□□□□□ -0.41
SLC38A1-205ENST00000548979 UBR1Q8IWV7 1749 aa12.5□□□□□ -0.41
SLC38A1-205ENST00000548979 TET3O43151 1660 aa12.49□□□□□ -0.41
SLC38A1-205ENST00000548979 UNC13BO14795 1591 aa12.49□□□□□ -0.41
SLC38A1-205ENST00000548979 TOM1O60784 492 aa12.49□□□□□ -0.41
SLC38A1-205ENST00000548979 FDX1P10109 184 aa12.49□□□□□ -0.41
SLC38A1-205ENST00000548979 LTKP29376 864 aa12.49□□□□□ -0.41
SLC38A1-205ENST00000548979 EMID1Q96A84 441 aaPredicted RBP12.49□□□□□ -0.41
SLC38A1-205ENST00000548979 FAM117AQ9C073 453 aa12.49□□□□□ -0.41
SLC38A1-205ENST00000548979 UBAP1LF5GYI3 381 aa12.48□□□□□ -0.41
SLC38A1-205ENST00000548979 IQGAP1P46940 1657 aa12.48□□□□□ -0.41
SLC38A1-205ENST00000548979 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.47□□□□□ -0.41
SLC38A1-205ENST00000548979 PCDHB15Q9Y5E8 787 aa12.47□□□□□ -0.41
SLC38A1-205ENST00000548979 ACIN1Q9UKV3 1341 aaKnown RBP12.46□□□□□ -0.41
SLC38A1-205ENST00000548979 PLA2G2CQ5R387 149 aa12.46□□□□□ -0.41
SLC38A1-205ENST00000548979 PIK3C2BO00750 1634 aa12.46□□□□□ -0.41
SLC38A1-205ENST00000548979 GCC2Q8IWJ2 1684 aa12.45□□□□□ -0.42
SLC38A1-205ENST00000548979 IQGAP3Q86VI3 1631 aa12.45□□□□□ -0.42
SLC38A1-205ENST00000548979 SYNMO15061 1565 aa12.45□□□□□ -0.42
SLC38A1-205ENST00000548979 Q3C1V9 767 aa12.45□□□□□ -0.42
SLC38A1-205ENST00000548979 MYSM1Q5VVJ2 828 aa12.45□□□□□ -0.42
SLC38A1-205ENST00000548979 ADGRB3O60242 1522 aa12.44□□□□□ -0.42
SLC38A1-205ENST00000548979 PLEKHG3A1L390 1219 aa12.44□□□□□ -0.42
SLC38A1-205ENST00000548979 PPP1R15AO75807 674 aaPredicted RBP12.44□□□□□ -0.42
SLC38A1-205ENST00000548979 RSBN1LQ6PCB5 846 aaPredicted RBP12.44□□□□□ -0.42
SLC38A1-205ENST00000548979 USB1Q9BQ65 265 aaKnown RBP12.44□□□□□ -0.42
SLC38A1-205ENST00000548979 GGCXP38435 758 aa12.43□□□□□ -0.42
SLC38A1-205ENST00000548979 BRPF1P55201 1214 aaPredicted RBP12.43□□□□□ -0.42
SLC38A1-205ENST00000548979 PRKD2Q9BZL6 878 aa12.43□□□□□ -0.42
SLC38A1-205ENST00000548979 LIMD1Q9UGP4 676 aa12.43□□□□□ -0.42
SLC38A1-205ENST00000548979 HFM1A2PYH4 1435 aa12.43□□□□□ -0.42
SLC38A1-205ENST00000548979 NAIPQ13075 1403 aa12.43□□□□□ -0.42
SLC38A1-205ENST00000548979 NEUROD2Q15784 382 aa12.42□□□□□ -0.42
SLC38A1-205ENST00000548979 MSS51Q4VC12 460 aa12.42□□□□□ -0.42
SLC38A1-205ENST00000548979 SPTLC1O15269 473 aa12.41□□□□□ -0.42
SLC38A1-205ENST00000548979 RGS20O76081 388 aa12.41□□□□□ -0.42
SLC38A1-205ENST00000548979 KCNA6P17658 529 aa12.41□□□□□ -0.42
SLC38A1-205ENST00000548979 RIC3Q7Z5B4 369 aa12.41□□□□□ -0.42
SLC38A1-205ENST00000548979 TRIM52Q96A61 297 aa12.41□□□□□ -0.42
SLC38A1-205ENST00000548979 RIMS2Q9UQ26 1411 aa12.4□□□□□ -0.42
SLC38A1-205ENST00000548979 C6orf229H3BNL8 230 aa12.4□□□□□ -0.42
SLC38A1-205ENST00000548979 CSPP1Q1MSJ5 1256 aa12.4□□□□□ -0.42
SLC38A1-205ENST00000548979 ANKLE1Q8NAG6 615 aa12.4□□□□□ -0.42
SLC38A1-205ENST00000548979 E9PCH4 1651 aa12.4□□□□□ -0.42
SLC38A1-205ENST00000548979 PLEKHG1Q9ULL1 1385 aa12.4□□□□□ -0.42
SLC38A1-205ENST00000548979 LIAT1Q6ZQX7 453 aa12.39□□□□□ -0.43
SLC38A1-205ENST00000548979 SLC26A8Q96RN1 970 aa12.39□□□□□ -0.43
SLC38A1-205ENST00000548979 POLR3EQ9NVU0 708 aa12.39□□□□□ -0.43
SLC38A1-205ENST00000548979 FCF1Q9Y324 198 aaKnown RBP12.39□□□□□ -0.43
SLC38A1-205ENST00000548979 TBX22Q9Y458 520 aa12.39□□□□□ -0.43
SLC38A1-205ENST00000548979 ZFYVE9O95405 1425 aa12.38□□□□□ -0.43
SLC38A1-205ENST00000548979 LRRC7Q96NW7 1537 aa12.38□□□□□ -0.43
SLC38A1-205ENST00000548979 CABLES1Q8TDN4 633 aa12.38□□□□□ -0.43
SLC38A1-205ENST00000548979 TMEM131LA2VDJ0 1609 aa12.37□□□□□ -0.43
SLC38A1-205ENST00000548979 MMP16P51512 607 aa12.37□□□□□ -0.43
SLC38A1-205ENST00000548979 PIP4K2BP78356 416 aa12.37□□□□□ -0.43
SLC38A1-205ENST00000548979 DIXDC1Q155Q3 683 aa12.37□□□□□ -0.43
SLC38A1-205ENST00000548979 QPCTQ16769 361 aa12.37□□□□□ -0.43
SLC38A1-205ENST00000548979 RETREG3Q86VR2 466 aa12.37□□□□□ -0.43
SLC38A1-205ENST00000548979 DXOO77932 396 aaKnown RBP12.36□□□□□ -0.43
SLC38A1-205ENST00000548979 PROSER2Q86WR7 435 aaPredicted RBP12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms