RNA–Protein interactions for RNA: ENST00000548821.1

GCN1-205, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 504 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-205ENST00000548821 PPM1GO15355 546 aaPredicted RBP13.25□□□□□ -0.29
GCN1-205ENST00000548821 NBPF6Q5VWK0 638 aa13.25□□□□□ -0.29
GCN1-205ENST00000548821 FLAD1Q8NFF5 587 aa13.25□□□□□ -0.29
GCN1-205ENST00000548821 SMARCC1Q92922 1105 aaPredicted RBP13.25□□□□□ -0.29
GCN1-205ENST00000548821 NBPF4Q96M43 638 aa13.25□□□□□ -0.29
GCN1-205ENST00000548821 POLR3GLQ9BT43 218 aa13.25□□□□□ -0.29
GCN1-205ENST00000548821 TFCP2L1Q9NZI6 479 aa13.25□□□□□ -0.29
GCN1-205ENST00000548821 ATF5Q9Y2D1 282 aaPredicted RBP13.25□□□□□ -0.29
GCN1-205ENST00000548821 SBF2Q86WG5 1849 aa13.25□□□□□ -0.29
GCN1-205ENST00000548821 YY1P25490 414 aa13.24□□□□□ -0.29
GCN1-205ENST00000548821 HSP90AB2PQ58FF8 381 aa13.23□□□□□ -0.29
GCN1-205ENST00000548821 ARXQ96QS3 562 aa13.23□□□□□ -0.29
GCN1-205ENST00000548821 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.23□□□□□ -0.297e-23■□□□□ 9.5
GCN1-205ENST00000548821 NHSQ6T4R5 1651 aa13.22□□□□□ -0.29
GCN1-205ENST00000548821 WASHC2AQ641Q2 1341 aa13.22□□□□□ -0.29
GCN1-205ENST00000548821 CCNL1Q9UK58 526 aaPredicted RBP13.22□□□□□ -0.29
GCN1-205ENST00000548821 NSD3Q9BZ95 1437 aa13.22□□□□□ -0.29
GCN1-205ENST00000548821 FBLN1P23142 703 aa13.21□□□□□ -0.29
GCN1-205ENST00000548821 CARD14Q9BXL6 1004 aa13.21□□□□□ -0.29
GCN1-205ENST00000548821 MSH5O43196 834 aa13.2□□□□□ -0.3
GCN1-205ENST00000548821 PTGER2P43116 358 aa13.2□□□□□ -0.3
GCN1-205ENST00000548821 AKT1S1Q96B36 256 aa13.2□□□□□ -0.3
GCN1-205ENST00000548821 SYT17Q9BSW7 474 aa13.2□□□□□ -0.3
GCN1-205ENST00000548821 NSD2O96028 1365 aa13.2□□□□□ -0.3
GCN1-205ENST00000548821 PLEKHG2Q9H7P9 1386 aa13.2□□□□□ -0.3
GCN1-205ENST00000548821 HSP90AB1P08238 724 aaKnown RBP13.19□□□□□ -0.3
GCN1-205ENST00000548821 LRRC4BQ9NT99 713 aa13.19□□□□□ -0.3
GCN1-205ENST00000548821 MPRIPQ6WCQ1 1025 aa13.18□□□□□ -0.3
GCN1-205ENST00000548821 IFNL2Q8IZJ0 200 aa13.18□□□□□ -0.3
GCN1-205ENST00000548821 USHBP1Q8N6Y0 703 aa13.18□□□□□ -0.3
GCN1-205ENST00000548821 FHDC1Q9C0D6 1143 aaPredicted RBP13.18□□□□□ -0.3
GCN1-205ENST00000548821 KNSTRNQ9Y448 316 aa13.18□□□□□ -0.3
GCN1-205ENST00000548821 EMILIN1Q9Y6C2 1016 aa13.18□□□□□ -0.3
GCN1-205ENST00000548821 HSPA5P11021 654 aaKnown RBP13.16□□□□□ -0.3
GCN1-205ENST00000548821 NKX1-1Q15270 411 aaPredicted RBP13.16□□□□□ -0.3
GCN1-205ENST00000548821 AMOTQ4VCS5 1084 aa13.16□□□□□ -0.3
GCN1-205ENST00000548821 MORC1Q86VD1 984 aa13.16□□□□□ -0.3
GCN1-205ENST00000548821 PDGFDQ9GZP0 370 aaPredicted RBP13.16□□□□□ -0.3
GCN1-205ENST00000548821 PANK3Q9H999 370 aa13.16□□□□□ -0.3
GCN1-205ENST00000548821 POLKQ9UBT6 870 aa13.16□□□□□ -0.3
GCN1-205ENST00000548821 MAP3K5Q99683 1374 aa13.16□□□□□ -0.3
GCN1-205ENST00000548821 MEGF6O75095 1541 aa13.15□□□□□ -0.3
GCN1-205ENST00000548821 GPR162Q16538 588 aa13.15□□□□□ -0.3
GCN1-205ENST00000548821 ZNF827Q17R98 1081 aa13.15□□□□□ -0.3
GCN1-205ENST00000548821 PLEKHO1Q53GL0 409 aaPredicted RBP13.15□□□□□ -0.3
GCN1-205ENST00000548821 SGIP1Q9BQI5 828 aa13.15□□□□□ -0.3
GCN1-205ENST00000548821 TMOD3Q9NYL9 352 aa13.15□□□□□ -0.3
GCN1-205ENST00000548821 KAT6BQ8WYB5 2073 aa13.15□□□□□ -0.3
GCN1-205ENST00000548821 AK7Q96M32 723 aa13.14□□□□□ -0.31
GCN1-205ENST00000548821 EYA1Q99502 592 aa13.14□□□□□ -0.31
GCN1-205ENST00000548821 PNPLA7Q6ZV29 1317 aa13.13□□□□□ -0.31
GCN1-205ENST00000548821 BTAF1O14981 1849 aa13.13□□□□□ -0.31
GCN1-205ENST00000548821 CASZ1Q86V15 1759 aa13.13□□□□□ -0.31
GCN1-205ENST00000548821 PALLDQ8WX93 1383 aa13.13□□□□□ -0.31
GCN1-205ENST00000548821 CYP27B1O15528 508 aa13.13□□□□□ -0.31
GCN1-205ENST00000548821 GRIN3BO60391 1043 aa13.13□□□□□ -0.31
GCN1-205ENST00000548821 TNNT2P45379 298 aaPredicted RBP13.13□□□□□ -0.31
GCN1-205ENST00000548821 KIF20BQ96Q89 1820 aa13.12□□□□□ -0.31
GCN1-205ENST00000548821 ERVV-2B6SEH9 535 aa13.12□□□□□ -0.31
GCN1-205ENST00000548821 KLHL34Q8N239 644 aa13.12□□□□□ -0.31
GCN1-205ENST00000548821 C1orf141Q5JVX7 400 aa13.11□□□□□ -0.31
GCN1-205ENST00000548821 DCAF5Q96JK2 942 aa13.11□□□□□ -0.31
GCN1-205ENST00000548821 PHKG2P15735 406 aa13.1□□□□□ -0.31
GCN1-205ENST00000548821 SSFA2P28290 1259 aa13.1□□□□□ -0.31
GCN1-205ENST00000548821 EIF4A2Q14240 407 aaKnown RBP13.1□□□□□ -0.31
GCN1-205ENST00000548821 PIGBQ92521 554 aa13.1□□□□□ -0.31
GCN1-205ENST00000548821 LOC102724428A0A0B4J2F2 783 aa13.09□□□□□ -0.31
GCN1-205ENST00000548821 SIK1P57059 783 aa13.09□□□□□ -0.31
GCN1-205ENST00000548821 COL23A1Q86Y22 540 aaPredicted RBP13.09□□□□□ -0.31
GCN1-205ENST00000548821 CD2APQ9Y5K6 639 aa13.09□□□□□ -0.31
GCN1-205ENST00000548821 NCAPD2Q15021 1401 aa13.08□□□□□ -0.32
GCN1-205ENST00000548821 ATP6V1AP38606 617 aa13.08□□□□□ -0.32
GCN1-205ENST00000548821 KCNQ4P56696 695 aa13.08□□□□□ -0.32
GCN1-205ENST00000548821 PAPPAQ13219 1627 aa13.08□□□□□ -0.32
GCN1-205ENST00000548821 IGSF1Q8N6C5 1336 aa13.08□□□□□ -0.32
GCN1-205ENST00000548821 MTHFSP49914 203 aa13.07□□□□□ -0.32
GCN1-205ENST00000548821 CABP4P57796 275 aa13.07□□□□□ -0.32
GCN1-205ENST00000548821 PELP1Q8IZL8 1130 aaKnown RBP13.07□□□□□ -0.32
GCN1-205ENST00000548821 DOT1LQ8TEK3 1739 aa13.06□□□□□ -0.32
GCN1-205ENST00000548821 ADRA2BP18089 450 aa13.05□□□□□ -0.32
GCN1-205ENST00000548821 TRAPPC3LQ5T215 181 aa13.05□□□□□ -0.32
GCN1-205ENST00000548821 ZNF530Q6P9A1 599 aaPredicted RBP13.05□□□□□ -0.32
GCN1-205ENST00000548821 NLGN1Q8N2Q7 840 aa13.05□□□□□ -0.32
GCN1-205ENST00000548821 RTCBQ9Y3I0 505 aaKnown RBP13.05□□□□□ -0.32
GCN1-205ENST00000548821 MYOM1P52179 1685 aa13.05□□□□□ -0.32
GCN1-205ENST00000548821 QSER1Q2KHR3 1735 aa13.05□□□□□ -0.32
GCN1-205ENST00000548821 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.04□□□□□ -0.32
GCN1-205ENST00000548821 RC3H1Q5TC82 1133 aaKnown RBP13.04□□□□□ -0.32
GCN1-205ENST00000548821 RBM42Q9BTD8 480 aaKnown RBP13.04□□□□□ -0.32
GCN1-205ENST00000548821 LY75O60449 1722 aa13.04□□□□□ -0.32
GCN1-205ENST00000548821 RGPD2P0DJD1 1756 aa13.03□□□□□ -0.32
GCN1-205ENST00000548821 GNPATO15228 680 aa13.03□□□□□ -0.32
GCN1-205ENST00000548821 SULT6B1Q6IMI4 303 aa13.03□□□□□ -0.32
GCN1-205ENST00000548821 ASAP1Q9ULH1 1129 aa13.03□□□□□ -0.32
GCN1-205ENST00000548821 PHF14O94880 888 aa13.02□□□□□ -0.33
GCN1-205ENST00000548821 AKAP4Q5JQC9 854 aa13.02□□□□□ -0.33
GCN1-205ENST00000548821 ZNF784Q8NCA9 323 aaPredicted RBP13.02□□□□□ -0.33
GCN1-205ENST00000548821 ATG3Q9NT62 314 aa13.02□□□□□ -0.33
GCN1-205ENST00000548821 MAP2P11137 1827 aaKnown RBP13.02□□□□□ -0.33
GCN1-205ENST00000548821 DIAPH1O60610 1272 aaKnown RBP13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms