RNA–Protein interactions for RNA: ENST00000548609.1

GSX2-204, Transcript of GS homeobox 2, humanhuman

TSL 1 (best)

Gene GSX2, Length 668 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSX2-204ENST00000548609 CEP350Q5VT06 3117 aa17.06■□□□□ 0.32
GSX2-204ENST00000548609 KCNQ4P56696 695 aa17.06■□□□□ 0.32
GSX2-204ENST00000548609 PUS7Q96PZ0 661 aaKnown RBP17.06■□□□□ 0.32
GSX2-204ENST00000548609 SGIP1Q9BQI5 828 aa17.06■□□□□ 0.32
GSX2-204ENST00000548609 ANKRD36BQ8N2N9 1353 aa17.05■□□□□ 0.32
GSX2-204ENST00000548609 KLHL34Q8N239 644 aa17.05■□□□□ 0.32
GSX2-204ENST00000548609 RRS1Q15050 365 aaKnown RBP17.04■□□□□ 0.32
GSX2-204ENST00000548609 USHBP1Q8N6Y0 703 aa17.04■□□□□ 0.32
GSX2-204ENST00000548609 ZNF784Q8NCA9 323 aaPredicted RBP17.04■□□□□ 0.32
GSX2-204ENST00000548609 ARXQ96QS3 562 aa17.04■□□□□ 0.32
GSX2-204ENST00000548609 GGNBP2Q9H3C7 697 aa17.03■□□□□ 0.32
GSX2-204ENST00000548609 PKD1L3Q7Z443 1732 aa17.03■□□□□ 0.32
GSX2-204ENST00000548609 RTL1A6NKG5 1358 aa17.02■□□□□ 0.32
GSX2-204ENST00000548609 NSD2O96028 1365 aa17.02■□□□□ 0.32
GSX2-204ENST00000548609 ANKRD26Q9UPS8 1709 aa17.02■□□□□ 0.32
GSX2-204ENST00000548609 GOLGB1Q14789 3259 aaKnown RBP17.02■□□□□ 0.31
GSX2-204ENST00000548609 USP47Q96K76 1375 aa17.02■□□□□ 0.31
GSX2-204ENST00000548609 PRIM1P49642 420 aaKnown RBP17.01■□□□□ 0.31
GSX2-204ENST00000548609 AKT1S1Q96B36 256 aa17.01■□□□□ 0.31
GSX2-204ENST00000548609 SMG6Q86US8 1419 aaKnown RBP17.01■□□□□ 0.31
GSX2-204ENST00000548609 PNPLA7Q6ZV29 1317 aa17■□□□□ 0.31
GSX2-204ENST00000548609 ZCRB1Q8TBF4 217 aaKnown RBP17■□□□□ 0.31
GSX2-204ENST00000548609 TMF1P82094 1093 aa16.99■□□□□ 0.31
GSX2-204ENST00000548609 SLC27A3Q5K4L6 730 aa16.99■□□□□ 0.31
GSX2-204ENST00000548609 NBPF6Q5VWK0 638 aa16.99■□□□□ 0.31
GSX2-204ENST00000548609 NBPF4Q96M43 638 aa16.99■□□□□ 0.31
GSX2-204ENST00000548609 TFCP2L1Q9NZI6 479 aa16.99■□□□□ 0.31
GSX2-204ENST00000548609 UBR3Q6ZT12 1888 aa16.99■□□□□ 0.31
GSX2-204ENST00000548609 FYB1O15117 783 aa16.98■□□□□ 0.31
GSX2-204ENST00000548609 PELP1Q8IZL8 1130 aaKnown RBP16.97■□□□□ 0.31
GSX2-204ENST00000548609 MAP3K5Q99683 1374 aa16.97■□□□□ 0.31
GSX2-204ENST00000548609 C4BP0C0L5 1744 aa16.96■□□□□ 0.31
GSX2-204ENST00000548609 SENP3-EIF4A1A0A087X0R7 540 aa16.96■□□□□ 0.31
GSX2-204ENST00000548609 POLD1P28340 1107 aa16.96■□□□□ 0.31
GSX2-204ENST00000548609 IFFO2Q5TF58 517 aa16.96■□□□□ 0.31
GSX2-204ENST00000548609 RAPGEF4Q8WZA2 1011 aa16.96■□□□□ 0.31
GSX2-204ENST00000548609 CCNL1Q9UK58 526 aaPredicted RBP16.96■□□□□ 0.31
GSX2-204ENST00000548609 MSH5O43196 834 aa16.95■□□□□ 0.3
GSX2-204ENST00000548609 GPR162Q16538 588 aa16.95■□□□□ 0.3
GSX2-204ENST00000548609 FLT4P35916 1363 aa16.94■□□□□ 0.3
GSX2-204ENST00000548609 SLC24A1O60721 1099 aa16.94■□□□□ 0.3
GSX2-204ENST00000548609 TATP17735 454 aaPredicted RBP16.94■□□□□ 0.3
GSX2-204ENST00000548609 HSP90AB2PQ58FF8 381 aa16.94■□□□□ 0.3
GSX2-204ENST00000548609 SLC16A10Q8TF71 515 aa16.94■□□□□ 0.3
GSX2-204ENST00000548609 NSD3Q9BZ95 1437 aa16.94■□□□□ 0.3
GSX2-204ENST00000548609 INSRP06213 1382 aa16.93■□□□□ 0.3
GSX2-204ENST00000548609 C1QTNF8P60827 252 aa16.92■□□□□ 0.3
GSX2-204ENST00000548609 NLGN2Q8NFZ4 835 aa16.92■□□□□ 0.3
GSX2-204ENST00000548609 PCDH11XQ9BZA7 1347 aa16.92■□□□□ 0.3
GSX2-204ENST00000548609 PCDH11YQ9BZA8 1340 aa16.92■□□□□ 0.3
GSX2-204ENST00000548609 MSL1Q68DK7 614 aa16.91■□□□□ 0.3
GSX2-204ENST00000548609 EMILIN1Q9Y6C2 1016 aa16.91■□□□□ 0.3
GSX2-204ENST00000548609 CGNL1Q0VF96 1302 aa16.91■□□□□ 0.3
GSX2-204ENST00000548609 PALLDQ8WX93 1383 aa16.89■□□□□ 0.3
GSX2-204ENST00000548609 COL23A1Q86Y22 540 aaPredicted RBP16.89■□□□□ 0.29
GSX2-204ENST00000548609 VIRMAQ69YN4 1812 aaKnown RBP16.89■□□□□ 0.29
GSX2-204ENST00000548609 PPM1GO15355 546 aaPredicted RBP16.88■□□□□ 0.29
GSX2-204ENST00000548609 TRIM26Q12899 539 aaPredicted RBP16.88■□□□□ 0.29
GSX2-204ENST00000548609 CDCA8Q53HL2 280 aa16.88■□□□□ 0.29
GSX2-204ENST00000548609 MPRIPQ6WCQ1 1025 aa16.88■□□□□ 0.29
GSX2-204ENST00000548609 CYP27B1O15528 508 aa16.87■□□□□ 0.29
GSX2-204ENST00000548609 CARD14Q9BXL6 1004 aa16.87■□□□□ 0.29
GSX2-204ENST00000548609 KIF24Q5T7B8 1368 aa16.87■□□□□ 0.29
GSX2-204ENST00000548609 POLR3GLQ9BT43 218 aa16.86■□□□□ 0.29
GSX2-204ENST00000548609 NCAPD2Q15021 1401 aa16.84■□□□□ 0.29
GSX2-204ENST00000548609 COL5A3P25940 1745 aaPredicted RBP16.84■□□□□ 0.29
GSX2-204ENST00000548609 N4BP2Q86UW6 1770 aaPredicted RBP16.84■□□□□ 0.29
GSX2-204ENST00000548609 YBX3P16989 372 aaKnown RBP eCLIP16.83■□□□□ 0.28
GSX2-204ENST00000548609 SMIM5Q71RC9 77 aa16.83■□□□□ 0.28
GSX2-204ENST00000548609 PHF14O94880 888 aa16.82■□□□□ 0.28
GSX2-204ENST00000548609 AK7Q96M32 723 aa16.82■□□□□ 0.28
GSX2-204ENST00000548609 C4AP0C0L4 1744 aa16.81■□□□□ 0.28
GSX2-204ENST00000548609 TNNT2P45379 298 aaPredicted RBP16.8■□□□□ 0.28
GSX2-204ENST00000548609 AMIGO3Q86WK7 504 aa16.8■□□□□ 0.28
GSX2-204ENST00000548609 SPG7Q9UQ90 795 aa16.8■□□□□ 0.28
GSX2-204ENST00000548609 KIF13BQ9NQT8 1826 aa16.8■□□□□ 0.28
GSX2-204ENST00000548609 KIAA1551Q9HCM1 1747 aa16.79■□□□□ 0.28
GSX2-204ENST00000548609 PIGBQ92521 554 aa16.79■□□□□ 0.28
GSX2-204ENST00000548609 SMARCC1Q92922 1105 aaPredicted RBP16.79■□□□□ 0.28
GSX2-204ENST00000548609 EYA1Q99502 592 aa16.79■□□□□ 0.28
GSX2-204ENST00000548609 WWC3Q9ULE0 1092 aa16.79■□□□□ 0.28
GSX2-204ENST00000548609 GIGYF1O75420 1035 aaPredicted RBP16.78■□□□□ 0.28
GSX2-204ENST00000548609 WASHC2AQ641Q2 1341 aa16.77■□□□□ 0.28
GSX2-204ENST00000548609 LINC00116Q8NCU8 138 aa16.77■□□□□ 0.28
GSX2-204ENST00000548609 FLAD1Q8NFF5 587 aa16.77■□□□□ 0.28
GSX2-204ENST00000548609 ZNF831Q5JPB2 1677 aa16.77■□□□□ 0.28
GSX2-204ENST00000548609 MYH14Q7Z406 1995 aaKnown RBP16.77■□□□□ 0.27
GSX2-204ENST00000548609 SCN11AQ9UI33 1791 aa16.77■□□□□ 0.27
GSX2-204ENST00000548609 PCGF6Q9BYE7 350 aa16.76■□□□□ 0.27
GSX2-204ENST00000548609 TMOD3Q9NYL9 352 aa16.76■□□□□ 0.27
GSX2-204ENST00000548609 POLKQ9UBT6 870 aa16.76■□□□□ 0.27
GSX2-204ENST00000548609 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.75■□□□□ 0.27
GSX2-204ENST00000548609 GRIN3BO60391 1043 aa16.75■□□□□ 0.27
GSX2-204ENST00000548609 NKX1-1Q15270 411 aaPredicted RBP16.75■□□□□ 0.27
GSX2-204ENST00000548609 ASAP1Q9ULH1 1129 aa16.75■□□□□ 0.27
GSX2-204ENST00000548609 BRCA1P38398 1863 aaKnown RBP16.75■□□□□ 0.27
GSX2-204ENST00000548609 CICQ96RK0 1608 aaPredicted RBP16.74■□□□□ 0.27
GSX2-204ENST00000548609 ATP10DQ9P241 1426 aa16.74■□□□□ 0.27
GSX2-204ENST00000548609 LOC102724428A0A0B4J2F2 783 aa16.74■□□□□ 0.27
GSX2-204ENST00000548609 PHKG2P15735 406 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms