RNA–Protein interactions for RNA: ENST00000548421.2

BRF1-213, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-213ENST00000548421 PKD1L3Q7Z443 1732 aa37.82■■■■□ 3.65
BRF1-213ENST00000548421 AMOTQ4VCS5 1084 aa37.82■■■■□ 3.64
BRF1-213ENST00000548421 PLEKHO1Q53GL0 409 aaPredicted RBP37.81■■■■□ 3.64
BRF1-213ENST00000548421 PHF23Q9BUL5 403 aaPredicted RBP37.81■■■■□ 3.64
BRF1-213ENST00000548421 USP35Q9P2H5 1018 aa37.81■■■■□ 3.64
BRF1-213ENST00000548421 USP21Q9UK80 565 aa37.8■■■■□ 3.64
BRF1-213ENST00000548421 ZNF521Q96K83 1311 aa37.8■■■■□ 3.64
BRF1-213ENST00000548421 OVOS2A0A0G2JMS6 1433 aa37.79■■■■□ 3.64
BRF1-213ENST00000548421 SPATA31A1Q5TZJ5 1347 aa37.79■■■■□ 3.64
BRF1-213ENST00000548421 IL2RBP14784 551 aa37.78■■■■□ 3.64
BRF1-213ENST00000548421 WWC1Q8IX03 1113 aa37.78■■■■□ 3.64
BRF1-213ENST00000548421 AFF2P51816 1311 aa37.77■■■■□ 3.64
BRF1-213ENST00000548421 SPATA31A5Q5VU36 1347 aa37.77■■■■□ 3.64
BRF1-213ENST00000548421 SPATA31A7Q8IWB4 1347 aa37.77■■■■□ 3.64
BRF1-213ENST00000548421 LMOD3Q0VAK6 560 aa37.77■■■■□ 3.64
BRF1-213ENST00000548421 VPS72Q15906 364 aa37.77■■■■□ 3.64
BRF1-213ENST00000548421 TRIM35Q9UPQ4 493 aa37.77■■■■□ 3.64
BRF1-213ENST00000548421 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP37.76■■■■□ 3.63
BRF1-213ENST00000548421 THRAP3Q9Y2W1 955 aaKnown RBP37.75■■■■□ 3.63
BRF1-213ENST00000548421 DISP2A7MBM2 1401 aa37.74■■■■□ 3.63
BRF1-213ENST00000548421 SPG7Q9UQ90 795 aa37.73■■■■□ 3.63
BRF1-213ENST00000548421 CCDC9Q9Y3X0 531 aaKnown RBP37.73■■■■□ 3.63
BRF1-213ENST00000548421 PDE3BQ13370 1112 aa37.71■■■■□ 3.63
BRF1-213ENST00000548421 ZNF530Q6P9A1 599 aaPredicted RBP37.71■■■■□ 3.63
BRF1-213ENST00000548421 MAP3K5Q99683 1374 aa37.71■■■■□ 3.63
BRF1-213ENST00000548421 WDR63Q8IWG1 891 aa37.69■■■■□ 3.62
BRF1-213ENST00000548421 SHANK3Q9BYB0 1731 aa37.68■■■■□ 3.62
BRF1-213ENST00000548421 GNAT3A8MTJ3 354 aa37.68■■■■□ 3.62
BRF1-213ENST00000548421 GOLGA2Q08379 1002 aa37.68■■■■□ 3.62
BRF1-213ENST00000548421 HTATSF1O43719 755 aaKnown RBP37.67■■■■□ 3.62
BRF1-213ENST00000548421 CENPBP07199 599 aaPredicted RBP37.67■■■■□ 3.62
BRF1-213ENST00000548421 AKAP4Q5JQC9 854 aa37.67■■■■□ 3.62
BRF1-213ENST00000548421 CDCA7Q9BWT1 371 aaPredicted RBP37.67■■■■□ 3.62
BRF1-213ENST00000548421 C1orf141Q5JVX7 400 aa37.66■■■■□ 3.62
BRF1-213ENST00000548421 RTF1Q92541 710 aaKnown RBP37.66■■■■□ 3.62
BRF1-213ENST00000548421 VIRMAQ69YN4 1812 aaKnown RBP37.66■■■■□ 3.62
BRF1-213ENST00000548421 BARGINQ6ZT62 677 aa37.65■■■■□ 3.62
BRF1-213ENST00000548421 ZCRB1Q8TBF4 217 aaKnown RBP37.65■■■■□ 3.62
BRF1-213ENST00000548421 ATRNO75882 1429 aa37.65■■■■□ 3.62
BRF1-213ENST00000548421 TRPC5Q9UL62 973 aaPredicted RBP37.63■■■■□ 3.61
BRF1-213ENST00000548421 PCDH11XQ9BZA7 1347 aa37.62■■■■□ 3.61
BRF1-213ENST00000548421 PCDH11YQ9BZA8 1340 aa37.62■■■■□ 3.61
BRF1-213ENST00000548421 CALD1Q05682 793 aaKnown RBP37.62■■■■□ 3.61
BRF1-213ENST00000548421 LRRC37A3O60309 1634 aa37.61■■■■□ 3.61
BRF1-213ENST00000548421 DCTN1Q14203 1278 aa37.61■■■■□ 3.61
BRF1-213ENST00000548421 CDCA7LQ96GN5 454 aa37.61■■■■□ 3.61
BRF1-213ENST00000548421 MCM10Q7L590 875 aa37.6■■■■□ 3.61
BRF1-213ENST00000548421 IFNL2Q8IZJ0 200 aa37.6■■■■□ 3.61
BRF1-213ENST00000548421 GLI3P10071 1580 aa37.6■■■■□ 3.61
BRF1-213ENST00000548421 IL16Q14005 1332 aa37.6■■■■□ 3.61
BRF1-213ENST00000548421 PHKG2P15735 406 aa37.59■■■■□ 3.61
BRF1-213ENST00000548421 THUMPD2Q9BTF0 503 aaKnown RBP37.59■■■■□ 3.61
BRF1-213ENST00000548421 ADAMTS7Q9UKP4 1686 aa37.58■■■■□ 3.61
BRF1-213ENST00000548421 TNS2Q63HR2 1409 aa37.58■■■■□ 3.61
BRF1-213ENST00000548421 E9PSI1 815 aa37.58■■■■□ 3.61
BRF1-213ENST00000548421 CYP27B1O15528 508 aa37.58■■■■□ 3.61
BRF1-213ENST00000548421 SLFN5Q08AF3 891 aa37.57■■■■□ 3.6
BRF1-213ENST00000548421 GJD4Q96KN9 370 aaPredicted RBP37.57■■■■□ 3.6
BRF1-213ENST00000548421 SCN11AQ9UI33 1791 aa37.57■■■■□ 3.6
BRF1-213ENST00000548421 SPINK5Q9NQ38 1064 aaPredicted RBP37.55■■■■□ 3.6
BRF1-213ENST00000548421 FAM98CQ17RN3 349 aaKnown RBP37.54■■■■□ 3.6
BRF1-213ENST00000548421 IL17REQ8NFR9 667 aa37.54■■■■□ 3.6
BRF1-213ENST00000548421 CEMIPQ8WUJ3 1361 aa37.54■■■■□ 3.6
BRF1-213ENST00000548421 EXOC5O00471 708 aa37.53■■■■□ 3.6
BRF1-213ENST00000548421 HSP90AB1P08238 724 aaKnown RBP37.53■■■■□ 3.6
BRF1-213ENST00000548421 ZNF772Q68DY9 489 aaPredicted RBP37.53■■■■□ 3.6
BRF1-213ENST00000548421 QTRT2Q9H974 415 aaKnown RBP37.53■■■■□ 3.6
BRF1-213ENST00000548421 THSD7AQ9UPZ6 1657 aa37.53■■■■□ 3.6
BRF1-213ENST00000548421 MPRIPQ6WCQ1 1025 aa37.52■■■■□ 3.6
BRF1-213ENST00000548421 TRMT2AQ8IZ69 625 aaKnown RBP37.51■■■■□ 3.59
BRF1-213ENST00000548421 RNMTO43148 476 aaKnown RBP37.5■■■■□ 3.59
BRF1-213ENST00000548421 DDB1Q16531 1140 aa37.5■■■■□ 3.59
BRF1-213ENST00000548421 DDX54Q8TDD1 881 aaKnown RBP37.5■■■■□ 3.59
BRF1-213ENST00000548421 MYH16Q9H6N6 1097 aa37.5■■■■□ 3.59
BRF1-213ENST00000548421 LGR6Q9HBX8 967 aa37.5■■■■□ 3.59
BRF1-213ENST00000548421 IFT57Q9NWB7 429 aa37.5■■■■□ 3.59
BRF1-213ENST00000548421 KDM6AO15550 1401 aaPredicted RBP37.5■■■■□ 3.59
BRF1-213ENST00000548421 DUSP27Q5VZP5 1158 aa37.48■■■■□ 3.59
BRF1-213ENST00000548421 DCAF5Q96JK2 942 aa37.48■■■■□ 3.59
BRF1-213ENST00000548421 GNAI1P63096 354 aa37.47■■■■□ 3.59
BRF1-213ENST00000548421 CFAP44Q96MT7 982 aa37.46■■■■□ 3.59
BRF1-213ENST00000548421 ZNF853P0CG23 659 aa37.45■■■■□ 3.59
BRF1-213ENST00000548421 NKX1-1Q15270 411 aaPredicted RBP37.45■■■■□ 3.59
BRF1-213ENST00000548421 SIPA1L3O60292 1781 aaPredicted RBP37.45■■■■□ 3.59
BRF1-213ENST00000548421 LAS1LQ9Y4W2 734 aaKnown RBP37.45■■■■□ 3.59
BRF1-213ENST00000548421 FANCIQ9NVI1 1328 aa37.42■■■■□ 3.58
BRF1-213ENST00000548421 TEFQ10587 303 aa37.42■■■■□ 3.58
BRF1-213ENST00000548421 MRC1P22897 1456 aa37.42■■■■□ 3.58
BRF1-213ENST00000548421 A0A0G2JS52 829 aa37.41■■■■□ 3.58
BRF1-213ENST00000548421 ONECUT3O60422 494 aaPredicted RBP37.41■■■■□ 3.58
BRF1-213ENST00000548421 MYT1Q01538 1121 aa37.41■■■■□ 3.58
BRF1-213ENST00000548421 ILDR2Q71H61 639 aa37.41■■■■□ 3.58
BRF1-213ENST00000548421 TOGARAM1Q9Y4F4 1720 aa37.4■■■■□ 3.58
BRF1-213ENST00000548421 TSR2Q969E8 191 aaKnown RBP37.39■■■■□ 3.58
BRF1-213ENST00000548421 CHL1O00533 1208 aa37.39■■■■□ 3.58
BRF1-213ENST00000548421 TAF7Q15545 349 aaPredicted RBP37.39■■■■□ 3.58
BRF1-213ENST00000548421 MBIPQ9NS73 344 aa37.38■■■■□ 3.57
BRF1-213ENST00000548421 BABAM1Q9NWV8 329 aa37.37■■■■□ 3.57
BRF1-213ENST00000548421 KDM3BQ7LBC6 1761 aa37.35■■■■□ 3.57
BRF1-213ENST00000548421 RBM6P78332 1123 aaKnown RBP37.35■■■■□ 3.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms