RNA–Protein interactions for RNA: ENST00000548283.6

TMEM116-206, Transcript of transmembrane protein 116, humanhuman

TSL 5

Gene TMEM116, Length 3,640 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-206ENST00000548283 GZF1Q9H116 711 aaPredicted RBP9.51□□□□□ -0.89
TMEM116-206ENST00000548283 GPBP1L1Q9HC44 474 aaPredicted RBP9.51□□□□□ -0.89
TMEM116-206ENST00000548283 TNS3Q68CZ2 1445 aa9.5□□□□□ -0.89
TMEM116-206ENST00000548283 FCHSD2O94868 740 aa9.5□□□□□ -0.89
TMEM116-206ENST00000548283 LMOD2Q6P5Q4 547 aa9.5□□□□□ -0.89
TMEM116-206ENST00000548283 PSMD1Q99460 953 aa9.5□□□□□ -0.89
TMEM116-206ENST00000548283 C19orf44Q9H6X5 657 aa9.5□□□□□ -0.89
TMEM116-206ENST00000548283 IGSF1Q8N6C5 1336 aa9.5□□□□□ -0.89
TMEM116-206ENST00000548283 HNRNPUQ00839 825 aaKnown RBP eCLIP9.49□□□□□ -0.89
TMEM116-206ENST00000548283 TMCO4Q5TGY1 634 aa9.49□□□□□ -0.89
TMEM116-206ENST00000548283 TMEM94Q12767 1356 aa9.49□□□□□ -0.89
TMEM116-206ENST00000548283 IBTKQ9P2D0 1353 aaPredicted RBP9.49□□□□□ -0.89
TMEM116-206ENST00000548283 CT47B1P0C2W7 299 aaPredicted RBP9.49□□□□□ -0.89
TMEM116-206ENST00000548283 LAMB4A4D0S4 1761 aa9.49□□□□□ -0.89
TMEM116-206ENST00000548283 MAPK8IP2Q13387 824 aaPredicted RBP9.49□□□□□ -0.89
TMEM116-206ENST00000548283 MFAP1P55081 439 aaKnown RBP9.48□□□□□ -0.89
TMEM116-206ENST00000548283 ZNF853P0CG23 659 aa9.48□□□□□ -0.89
TMEM116-206ENST00000548283 CRB1P82279 1406 aa9.48□□□□□ -0.89
TMEM116-206ENST00000548283 NME9Q86XW9 330 aa9.48□□□□□ -0.89
TMEM116-206ENST00000548283 TRIM35Q9UPQ4 493 aa9.47□□□□□ -0.89
TMEM116-206ENST00000548283 SOS2Q07890 1332 aaPredicted RBP9.47□□□□□ -0.89
TMEM116-206ENST00000548283 RREB1Q92766 1687 aa9.47□□□□□ -0.89
TMEM116-206ENST00000548283 QSER1Q2KHR3 1735 aa9.47□□□□□ -0.89
TMEM116-206ENST00000548283 WWC1Q8IX03 1113 aa9.46□□□□□ -0.89
TMEM116-206ENST00000548283 FAM9BQ8IZU0 186 aa9.46□□□□□ -0.89
TMEM116-206ENST00000548283 CFAP53Q96M91 514 aa9.46□□□□□ -0.89
TMEM116-206ENST00000548283 PNNQ9H307 717 aaKnown RBP9.46□□□□□ -0.89
TMEM116-206ENST00000548283 RGS22Q8NE09 1264 aa9.46□□□□□ -0.9
TMEM116-206ENST00000548283 GGNBP2Q9H3C7 697 aa9.45□□□□□ -0.9
TMEM116-206ENST00000548283 PHF8Q9UPP1 1060 aa9.45□□□□□ -0.9
TMEM116-206ENST00000548283 E9PSI1 815 aa9.45□□□□□ -0.9
TMEM116-206ENST00000548283 COG3Q96JB2 828 aa9.45□□□□□ -0.9
TMEM116-206ENST00000548283 BCCIPQ9P287 314 aaKnown RBP eCLIP9.45□□□□□ -0.9
TMEM116-206ENST00000548283 PHLPP1O60346 1717 aa9.44□□□□□ -0.9
TMEM116-206ENST00000548283 SAFB2Q14151 953 aaKnown RBP eCLIP9.44□□□□□ -0.9
TMEM116-206ENST00000548283 MSH6P52701 1360 aa9.44□□□□□ -0.9
TMEM116-206ENST00000548283 CEMIPQ8WUJ3 1361 aa9.44□□□□□ -0.9
TMEM116-206ENST00000548283 DIAPH1O60610 1272 aaKnown RBP9.44□□□□□ -0.9
TMEM116-206ENST00000548283 TOGARAM1Q9Y4F4 1720 aa9.43□□□□□ -0.9
TMEM116-206ENST00000548283 HTATSF1O43719 755 aaKnown RBP9.43□□□□□ -0.9
TMEM116-206ENST00000548283 WDR43Q15061 677 aaKnown RBP eCLIP9.43□□□□□ -0.9
TMEM116-206ENST00000548283 BABAM1Q9NWV8 329 aa9.43□□□□□ -0.9
TMEM116-206ENST00000548283 MAP3K19Q56UN5 1328 aa9.43□□□□□ -0.9
TMEM116-206ENST00000548283 EIF4A2Q14240 407 aaKnown RBP9.42□□□□□ -0.9
TMEM116-206ENST00000548283 DMRT2Q9Y5R5 561 aa9.42□□□□□ -0.9
TMEM116-206ENST00000548283 KIAA0232Q92628 1395 aa9.42□□□□□ -0.9
TMEM116-206ENST00000548283 SOS1Q07889 1333 aaPredicted RBP9.42□□□□□ -0.9
TMEM116-206ENST00000548283 GOLGA2Q08379 1002 aa9.42□□□□□ -0.9
TMEM116-206ENST00000548283 SPINK5Q9NQ38 1064 aaPredicted RBP9.42□□□□□ -0.9
TMEM116-206ENST00000548283 ZRANB1Q9UGI0 708 aa9.42□□□□□ -0.9
TMEM116-206ENST00000548283 TMPOP42166 694 aaKnown RBP9.41□□□□□ -0.9
TMEM116-206ENST00000548283 KCNH5Q8NCM2 988 aa9.41□□□□□ -0.9
TMEM116-206ENST00000548283 HEG1Q9ULI3 1381 aa9.41□□□□□ -0.9
TMEM116-206ENST00000548283 SPATA31A3Q5VYP0 1347 aa9.41□□□□□ -0.9
TMEM116-206ENST00000548283 CADPS2Q86UW7 1296 aa9.41□□□□□ -0.9
TMEM116-206ENST00000548283 IP6K1Q92551 441 aa9.41□□□□□ -0.9
TMEM116-206ENST00000548283 C5P01031 1676 aa9.41□□□□□ -0.9
TMEM116-206ENST00000548283 TUBGCP6Q96RT7 1819 aa9.41□□□□□ -0.9
TMEM116-206ENST00000548283 HOXC9P31274 260 aa9.41□□□□□ -0.9
TMEM116-206ENST00000548283 ARHGEF25Q86VW2 580 aa9.41□□□□□ -0.9
TMEM116-206ENST00000548283 CNPY4Q8N129 248 aa9.4□□□□□ -0.9
TMEM116-206ENST00000548283 TCP11L2Q8N4U5 519 aa9.4□□□□□ -0.9
TMEM116-206ENST00000548283 WDR70Q9NW82 654 aa9.4□□□□□ -0.9
TMEM116-206ENST00000548283 AAMPQ13685 434 aa9.4□□□□□ -0.9
TMEM116-206ENST00000548283 EMILIN1Q9Y6C2 1016 aa9.4□□□□□ -0.9
TMEM116-206ENST00000548283 MKRN3Q13064 507 aaKnown RBP9.39□□□□□ -0.91
TMEM116-206ENST00000548283 NFE2L2Q16236 605 aa9.39□□□□□ -0.91
TMEM116-206ENST00000548283 PXDNLA1KZ92 1463 aa9.39□□□□□ -0.91
TMEM116-206ENST00000548283 RRP1P56182 461 aaKnown RBP9.39□□□□□ -0.91
TMEM116-206ENST00000548283 DISP2A7MBM2 1401 aa9.39□□□□□ -0.91
TMEM116-206ENST00000548283 NUP188Q5SRE5 1749 aa9.39□□□□□ -0.91
TMEM116-206ENST00000548283 B4GALNT3Q6L9W6 998 aa9.38□□□□□ -0.91
TMEM116-206ENST00000548283 PRDM16Q9HAZ2 1276 aa9.38□□□□□ -0.91
TMEM116-206ENST00000548283 RGS12O14924 1447 aa9.38□□□□□ -0.91
TMEM116-206ENST00000548283 APAF1O14727 1248 aa9.38□□□□□ -0.91
TMEM116-206ENST00000548283 TICAM2Q86XR7 235 aa9.38□□□□□ -0.91
TMEM116-206ENST00000548283 PPP4R2Q9NY27 417 aa9.38□□□□□ -0.91
TMEM116-206ENST00000548283 COL5A2P05997 1499 aaPredicted RBP9.38□□□□□ -0.91
TMEM116-206ENST00000548283 THSD7AQ9UPZ6 1657 aa9.38□□□□□ -0.91
TMEM116-206ENST00000548283 FBXW7Q969H0 707 aa9.37□□□□□ -0.91
TMEM116-206ENST00000548283 CDCA7LQ96GN5 454 aa9.37□□□□□ -0.91
TMEM116-206ENST00000548283 IFT57Q9NWB7 429 aa9.37□□□□□ -0.91
TMEM116-206ENST00000548283 NPHP3Q7Z494 1330 aa9.37□□□□□ -0.91
TMEM116-206ENST00000548283 BRINP3Q76B58 766 aa9.37□□□□□ -0.91
TMEM116-206ENST00000548283 NOP58Q9Y2X3 529 aaKnown RBP9.37□□□□□ -0.91
TMEM116-206ENST00000548283 RCAN3Q9UKA8 241 aa9.36□□□□□ -0.91
TMEM116-206ENST00000548283 ALDH1L2Q3SY69 923 aa9.36□□□□□ -0.91
TMEM116-206ENST00000548283 PROSER2Q86WR7 435 aaPredicted RBP9.36□□□□□ -0.91
TMEM116-206ENST00000548283 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.36□□□□□ -0.91
TMEM116-206ENST00000548283 PPP1R1BQ9UD71 204 aaPredicted RBP9.36□□□□□ -0.91
TMEM116-206ENST00000548283 PSME1Q06323 249 aa9.35□□□□□ -0.91
TMEM116-206ENST00000548283 ORAI2Q96SN7 254 aa9.35□□□□□ -0.91
TMEM116-206ENST00000548283 CLUAP1Q96AJ1 413 aa9.35□□□□□ -0.91
TMEM116-206ENST00000548283 PHACTR3Q96KR7 559 aa9.35□□□□□ -0.91
TMEM116-206ENST00000548283 KDM2BQ8NHM5 1336 aa9.35□□□□□ -0.91
TMEM116-206ENST00000548283 PDE3AQ14432 1141 aa9.35□□□□□ -0.91
TMEM116-206ENST00000548283 ITGB4P16144 1822 aa9.34□□□□□ -0.91
TMEM116-206ENST00000548283 SMARCA5O60264 1052 aaPredicted RBP9.34□□□□□ -0.91
TMEM116-206ENST00000548283 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.34□□□□□ -0.91
TMEM116-206ENST00000548283 CHL1O00533 1208 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms