RNA–Protein interactions for RNA: ENST00000548247.1

RACGAP1-211, Transcript of Rac GTPase activating protein 1, humanhuman

TSL 4

Gene RACGAP1, Length 564 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RACGAP1-211ENST00000548247 COL23A1Q86Y22 540 aaPredicted RBP18.81■□□□□ 0.6
RACGAP1-211ENST00000548247 NEUROD1Q13562 356 aa18.8■□□□□ 0.6
RACGAP1-211ENST00000548247 LTV1Q96GA3 475 aaPredicted RBP18.8■□□□□ 0.6
RACGAP1-211ENST00000548247 MSH5O43196 834 aa18.79■□□□□ 0.6
RACGAP1-211ENST00000548247 MSL1Q68DK7 614 aa18.79■□□□□ 0.6
RACGAP1-211ENST00000548247 IP6K1Q92551 441 aa18.79■□□□□ 0.6
RACGAP1-211ENST00000548247 CCNL1Q9UK58 526 aaPredicted RBP18.79■□□□□ 0.6
RACGAP1-211ENST00000548247 SLC12A5Q9H2X9 1139 aa18.78■□□□□ 0.6
RACGAP1-211ENST00000548247 TMC1Q8TDI8 760 aa18.77■□□□□ 0.6
RACGAP1-211ENST00000548247 FAM208AQ9UK61 1670 aaKnown RBP18.76■□□□□ 0.59
RACGAP1-211ENST00000548247 GPBP1L1Q9HC44 474 aaPredicted RBP18.76■□□□□ 0.59
RACGAP1-211ENST00000548247 EDC4Q6P2E9 1401 aaKnown RBP18.75■□□□□ 0.59
RACGAP1-211ENST00000548247 HDGFL2Q7Z4V5 671 aaPredicted RBP18.75■□□□□ 0.59
RACGAP1-211ENST00000548247 ADCY9O60503 1353 aa18.75■□□□□ 0.59
RACGAP1-211ENST00000548247 RGPD2P0DJD1 1756 aa18.75■□□□□ 0.59
RACGAP1-211ENST00000548247 HSPA6P17066 643 aa18.74■□□□□ 0.59
RACGAP1-211ENST00000548247 ZCRB1Q8TBF4 217 aaKnown RBP18.74■□□□□ 0.59
RACGAP1-211ENST00000548247 MEGF6O75095 1541 aa18.74■□□□□ 0.59
RACGAP1-211ENST00000548247 A0A1W2PP64 1363 aa18.73■□□□□ 0.59
RACGAP1-211ENST00000548247 ZNF526Q8TF50 670 aaPredicted RBP18.73■□□□□ 0.59
RACGAP1-211ENST00000548247 FBLN1P23142 703 aa18.72■□□□□ 0.59
RACGAP1-211ENST00000548247 CD2APQ9Y5K6 639 aa18.72■□□□□ 0.59
RACGAP1-211ENST00000548247 MAP3K19Q56UN5 1328 aa18.72■□□□□ 0.59
RACGAP1-211ENST00000548247 USP47Q96K76 1375 aa18.71■□□□□ 0.59
RACGAP1-211ENST00000548247 HOXC9P31274 260 aa18.71■□□□□ 0.59
RACGAP1-211ENST00000548247 C5P01031 1676 aa18.7■□□□□ 0.58
RACGAP1-211ENST00000548247 TERF2IPQ9NYB0 399 aa18.69■□□□□ 0.58
RACGAP1-211ENST00000548247 TRIM26Q12899 539 aaPredicted RBP18.68■□□□□ 0.58
RACGAP1-211ENST00000548247 WWC3Q9ULE0 1092 aa18.68■□□□□ 0.58
RACGAP1-211ENST00000548247 TAF1LQ8IZX4 1826 aa18.67■□□□□ 0.58
RACGAP1-211ENST00000548247 AMPHP49418 695 aa18.67■□□□□ 0.58
RACGAP1-211ENST00000548247 NBPF6Q5VWK0 638 aa18.66■□□□□ 0.58
RACGAP1-211ENST00000548247 AMIGO3Q86WK7 504 aa18.66■□□□□ 0.58
RACGAP1-211ENST00000548247 USHBP1Q8N6Y0 703 aa18.66■□□□□ 0.58
RACGAP1-211ENST00000548247 NBPF4Q96M43 638 aa18.66■□□□□ 0.58
RACGAP1-211ENST00000548247 FLAD1Q8NFF5 587 aa18.65■□□□□ 0.58
RACGAP1-211ENST00000548247 CARD11Q9BXL7 1154 aa18.65■□□□□ 0.58
RACGAP1-211ENST00000548247 KIF3CO14782 793 aa18.64■□□□□ 0.57
RACGAP1-211ENST00000548247 SMIM5Q71RC9 77 aa18.64■□□□□ 0.57
RACGAP1-211ENST00000548247 COG3Q96JB2 828 aa18.64■□□□□ 0.57
RACGAP1-211ENST00000548247 IGSF1Q8N6C5 1336 aa18.64■□□□□ 0.57
RACGAP1-211ENST00000548247 TOGARAM1Q9Y4F4 1720 aa18.63■□□□□ 0.57
RACGAP1-211ENST00000548247 PALLDQ8WX93 1383 aa18.63■□□□□ 0.57
RACGAP1-211ENST00000548247 C4BP0C0L5 1744 aa18.62■□□□□ 0.57
RACGAP1-211ENST00000548247 TONSLQ96HA7 1378 aa18.61■□□□□ 0.57
RACGAP1-211ENST00000548247 CGNL1Q0VF96 1302 aa18.61■□□□□ 0.57
RACGAP1-211ENST00000548247 RRS1Q15050 365 aaKnown RBP18.61■□□□□ 0.57
RACGAP1-211ENST00000548247 MPRIPQ6WCQ1 1025 aa18.61■□□□□ 0.57
RACGAP1-211ENST00000548247 PUS7Q96PZ0 661 aaKnown RBP18.61■□□□□ 0.57
RACGAP1-211ENST00000548247 RAPGEF4Q8WZA2 1011 aa18.6■□□□□ 0.57
RACGAP1-211ENST00000548247 UBR3Q6ZT12 1888 aa18.6■□□□□ 0.57
RACGAP1-211ENST00000548247 RTL1A6NKG5 1358 aa18.59■□□□□ 0.57
RACGAP1-211ENST00000548247 PHF14O94880 888 aa18.59■□□□□ 0.57
RACGAP1-211ENST00000548247 TATP17735 454 aaPredicted RBP18.59■□□□□ 0.57
RACGAP1-211ENST00000548247 AK7Q96M32 723 aa18.59■□□□□ 0.57
RACGAP1-211ENST00000548247 CYP27B1O15528 508 aa18.58■□□□□ 0.56
RACGAP1-211ENST00000548247 ITGB4P16144 1822 aa18.58■□□□□ 0.56
RACGAP1-211ENST00000548247 PCDH11XQ9BZA7 1347 aa18.57■□□□□ 0.56
RACGAP1-211ENST00000548247 PCDH11YQ9BZA8 1340 aa18.57■□□□□ 0.56
RACGAP1-211ENST00000548247 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.57■□□□□ 0.56
RACGAP1-211ENST00000548247 HMGB2P26583 209 aaKnown RBP18.56■□□□□ 0.56
RACGAP1-211ENST00000548247 DNAJC5GQ8N7S2 189 aa18.56■□□□□ 0.56
RACGAP1-211ENST00000548247 CICQ96RK0 1608 aaPredicted RBP18.56■□□□□ 0.56
RACGAP1-211ENST00000548247 APLP1P51693 650 aa18.55■□□□□ 0.56
RACGAP1-211ENST00000548247 HSP90AB2PQ58FF8 381 aa18.54■□□□□ 0.56
RACGAP1-211ENST00000548247 PIGBQ92521 554 aa18.54■□□□□ 0.56
RACGAP1-211ENST00000548247 SMARCC1Q92922 1105 aaPredicted RBP18.54■□□□□ 0.56
RACGAP1-211ENST00000548247 TESK2Q96S53 571 aa18.54■□□□□ 0.56
RACGAP1-211ENST00000548247 GGNBP2Q9H3C7 697 aa18.54■□□□□ 0.56
RACGAP1-211ENST00000548247 SMG6Q86US8 1419 aaKnown RBP18.54■□□□□ 0.56
RACGAP1-211ENST00000548247 MAP2P11137 1827 aaKnown RBP18.53■□□□□ 0.56
RACGAP1-211ENST00000548247 FYB1O15117 783 aa18.53■□□□□ 0.56
RACGAP1-211ENST00000548247 SSFA2P28290 1259 aa18.53■□□□□ 0.56
RACGAP1-211ENST00000548247 LINC00116Q8NCU8 138 aa18.52■□□□□ 0.56
RACGAP1-211ENST00000548247 INSRP06213 1382 aa18.52■□□□□ 0.55
RACGAP1-211ENST00000548247 NSD3Q9BZ95 1437 aa18.51■□□□□ 0.55
RACGAP1-211ENST00000548247 TOMM70O94826 608 aa18.51■□□□□ 0.55
RACGAP1-211ENST00000548247 PCNTO95613 3336 aa18.51■□□□□ 0.55
RACGAP1-211ENST00000548247 KIAA1551Q9HCM1 1747 aa18.51■□□□□ 0.55
RACGAP1-211ENST00000548247 PXDNLA1KZ92 1463 aa18.5■□□□□ 0.55
RACGAP1-211ENST00000548247 PKD1L3Q7Z443 1732 aa18.49■□□□□ 0.55
RACGAP1-211ENST00000548247 ST20-MTHFSA0A0A6YYL1 179 aa18.49■□□□□ 0.55
RACGAP1-211ENST00000548247 LOC102724428A0A0B4J2F2 783 aa18.49■□□□□ 0.55
RACGAP1-211ENST00000548247 SIK1P57059 783 aa18.49■□□□□ 0.55
RACGAP1-211ENST00000548247 N4BP2Q86UW6 1770 aaPredicted RBP18.49■□□□□ 0.55
RACGAP1-211ENST00000548247 KIF13BQ9NQT8 1826 aa18.49■□□□□ 0.55
RACGAP1-211ENST00000548247 MMP10P09238 476 aa18.48■□□□□ 0.55
RACGAP1-211ENST00000548247 ITPK1Q13572 414 aa18.48■□□□□ 0.55
RACGAP1-211ENST00000548247 NKX1-1Q15270 411 aaPredicted RBP18.48■□□□□ 0.55
RACGAP1-211ENST00000548247 NMRK2Q9NPI5 230 aa18.48■□□□□ 0.55
RACGAP1-211ENST00000548247 FLT4P35916 1363 aa18.47■□□□□ 0.55
RACGAP1-211ENST00000548247 GNPATO15228 680 aa18.47■□□□□ 0.55
RACGAP1-211ENST00000548247 BCS1LQ9Y276 419 aa18.47■□□□□ 0.55
RACGAP1-211ENST00000548247 A0A0G2JLW4 131 aa18.46■□□□□ 0.55
RACGAP1-211ENST00000548247 ASAP1Q9ULH1 1129 aa18.46■□□□□ 0.55
RACGAP1-211ENST00000548247 HTRA3P83110 453 aa18.45■□□□□ 0.54
RACGAP1-211ENST00000548247 WDR90Q96KV7 1748 aa18.45■□□□□ 0.54
RACGAP1-211ENST00000548247 ATP6V1AP38606 617 aa18.44■□□□□ 0.54
RACGAP1-211ENST00000548247 TGFB2P61812 414 aa18.44■□□□□ 0.54
RACGAP1-211ENST00000548247 ARHGAP27Q6ZUM4 889 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms