RNA–Protein interactions for RNA: ENST00000548097.5

KRT4-201, Transcript of keratin 4, humanhuman

TSL 1 (best)

Gene KRT4, Length 1,839 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT4-201ENST00000548097 ZNF772Q68DY9 489 aaPredicted RBP22.71■■□□□ 1.23
KRT4-201ENST00000548097 MAPK8IP3Q9UPT6 1336 aa22.71■■□□□ 1.23
KRT4-201ENST00000548097 MTHFSDQ2M296 383 aaKnown RBP22.71■■□□□ 1.23
KRT4-201ENST00000548097 WNK3Q9BYP7 1800 aa22.69■■□□□ 1.22
KRT4-201ENST00000548097 DISP2A7MBM2 1401 aa22.69■■□□□ 1.22
KRT4-201ENST00000548097 A0A0G2JS52 829 aa22.68■■□□□ 1.22
KRT4-201ENST00000548097 MYT1Q01538 1121 aa22.68■■□□□ 1.22
KRT4-201ENST00000548097 PNNQ9H307 717 aaKnown RBP22.68■■□□□ 1.22
KRT4-201ENST00000548097 THRAP3Q9Y2W1 955 aaKnown RBP22.68■■□□□ 1.22
KRT4-201ENST00000548097 POTEAQ6S8J7 498 aa22.68■■□□□ 1.22
KRT4-201ENST00000548097 OVOS2A0A0G2JMS6 1433 aa22.67■■□□□ 1.22
KRT4-201ENST00000548097 NEFMP07197 916 aa22.67■■□□□ 1.22
KRT4-201ENST00000548097 PARP4Q9UKK3 1724 aaKnown RBP22.67■■□□□ 1.22
KRT4-201ENST00000548097 BARGINQ6ZT62 677 aa22.66■■□□□ 1.22
KRT4-201ENST00000548097 HNRNPUQ00839 825 aaKnown RBP eCLIP22.66■■□□□ 1.22
KRT4-201ENST00000548097 TMPOP42166 694 aaKnown RBP22.65■■□□□ 1.22
KRT4-201ENST00000548097 PLEKHO1Q53GL0 409 aaPredicted RBP22.65■■□□□ 1.22
KRT4-201ENST00000548097 ZCRB1Q8TBF4 217 aaKnown RBP22.64■■□□□ 1.22
KRT4-201ENST00000548097 DDX54Q8TDD1 881 aaKnown RBP22.64■■□□□ 1.22
KRT4-201ENST00000548097 ZNF530Q6P9A1 599 aaPredicted RBP22.64■■□□□ 1.21
KRT4-201ENST00000548097 RIPK4P57078 832 aa22.63■■□□□ 1.21
KRT4-201ENST00000548097 NFE2L2Q16236 605 aa22.63■■□□□ 1.21
KRT4-201ENST00000548097 PKD1L3Q7Z443 1732 aa22.62■■□□□ 1.21
KRT4-201ENST00000548097 SHANK3Q9BYB0 1731 aa22.62■■□□□ 1.21
KRT4-201ENST00000548097 LRRC37A3O60309 1634 aa22.62■■□□□ 1.21
KRT4-201ENST00000548097 SPG7Q9UQ90 795 aa22.62■■□□□ 1.21
KRT4-201ENST00000548097 DLG5Q8TDM6 1919 aa22.62■■□□□ 1.21
KRT4-201ENST00000548097 EXOC5O00471 708 aa22.61■■□□□ 1.21
KRT4-201ENST00000548097 CYP27B1O15528 508 aa22.61■■□□□ 1.21
KRT4-201ENST00000548097 RBM6P78332 1123 aaKnown RBP22.61■■□□□ 1.21
KRT4-201ENST00000548097 DDB1Q16531 1140 aa22.61■■□□□ 1.21
KRT4-201ENST00000548097 AMOTQ4VCS5 1084 aa22.61■■□□□ 1.21
KRT4-201ENST00000548097 DCTN1Q14203 1278 aa22.61■■□□□ 1.21
KRT4-201ENST00000548097 GAS2L2Q8NHY3 880 aa22.61■■□□□ 1.21
KRT4-201ENST00000548097 SEPT12Q8IYM1 358 aa22.6■■□□□ 1.21
KRT4-201ENST00000548097 THSD7AQ9UPZ6 1657 aa22.6■■□□□ 1.21
KRT4-201ENST00000548097 RXRBP28702 533 aa22.59■■□□□ 1.21
KRT4-201ENST00000548097 CDCA7Q9BWT1 371 aaPredicted RBP22.59■■□□□ 1.21
KRT4-201ENST00000548097 THUMPD2Q9BTF0 503 aaKnown RBP22.59■■□□□ 1.21
KRT4-201ENST00000548097 ONECUT3O60422 494 aaPredicted RBP22.58■■□□□ 1.21
KRT4-201ENST00000548097 PHKG2P15735 406 aa22.58■■□□□ 1.21
KRT4-201ENST00000548097 FAM182BQ5T319 152 aa22.58■■□□□ 1.21
KRT4-201ENST00000548097 MCM10Q7L590 875 aa22.58■■□□□ 1.21
KRT4-201ENST00000548097 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.58■■□□□ 1.21
KRT4-201ENST00000548097 TRIM35Q9UPQ4 493 aa22.58■■□□□ 1.21
KRT4-201ENST00000548097 TNS2Q63HR2 1409 aa22.58■■□□□ 1.2
KRT4-201ENST00000548097 C1orf141Q5JVX7 400 aa22.57■■□□□ 1.2
KRT4-201ENST00000548097 MPRIPQ6WCQ1 1025 aa22.57■■□□□ 1.2
KRT4-201ENST00000548097 PCDH11XQ9BZA7 1347 aa22.57■■□□□ 1.2
KRT4-201ENST00000548097 PCDH11YQ9BZA8 1340 aa22.57■■□□□ 1.2
KRT4-201ENST00000548097 GNAT3A8MTJ3 354 aa22.56■■□□□ 1.2
KRT4-201ENST00000548097 AKAP4Q5JQC9 854 aa22.56■■□□□ 1.2
KRT4-201ENST00000548097 IFNL2Q8IZJ0 200 aa22.56■■□□□ 1.2
KRT4-201ENST00000548097 MARCH10Q8NA82 808 aaPredicted RBP22.56■■□□□ 1.2
KRT4-201ENST00000548097 LGR6Q9HBX8 967 aa22.56■■□□□ 1.2
KRT4-201ENST00000548097 MAP3K5Q99683 1374 aa22.56■■□□□ 1.2
KRT4-201ENST00000548097 PDE3BQ13370 1112 aa22.53■■□□□ 1.2
KRT4-201ENST00000548097 IL17REQ8NFR9 667 aa22.53■■□□□ 1.2
KRT4-201ENST00000548097 BRWD3Q6RI45 1802 aa22.53■■□□□ 1.2
KRT4-201ENST00000548097 WWC1Q8IX03 1113 aa22.52■■□□□ 1.2
KRT4-201ENST00000548097 RGS12O14924 1447 aa22.52■■□□□ 1.2
KRT4-201ENST00000548097 RTF1Q92541 710 aaKnown RBP22.52■■□□□ 1.2
KRT4-201ENST00000548097 KDM6AO15550 1401 aaPredicted RBP22.52■■□□□ 1.19
KRT4-201ENST00000548097 PLEKHG2Q9H7P9 1386 aa22.51■■□□□ 1.19
KRT4-201ENST00000548097 VIRMAQ69YN4 1812 aaKnown RBP22.5■■□□□ 1.19
KRT4-201ENST00000548097 RNMTO43148 476 aaKnown RBP22.5■■□□□ 1.19
KRT4-201ENST00000548097 ACSBG1Q96GR2 724 aa22.47■■□□□ 1.19
KRT4-201ENST00000548097 LMOD3Q0VAK6 560 aa22.47■■□□□ 1.19
KRT4-201ENST00000548097 CCDC27Q2M243 656 aa22.47■■□□□ 1.19
KRT4-201ENST00000548097 DCAF5Q96JK2 942 aa22.47■■□□□ 1.19
KRT4-201ENST00000548097 SPINK5Q9NQ38 1064 aaPredicted RBP22.47■■□□□ 1.19
KRT4-201ENST00000548097 TOGARAM1Q9Y4F4 1720 aa22.47■■□□□ 1.19
KRT4-201ENST00000548097 ZNF521Q96K83 1311 aa22.47■■□□□ 1.19
KRT4-201ENST00000548097 NKX1-1Q15270 411 aaPredicted RBP22.46■■□□□ 1.19
KRT4-201ENST00000548097 KRT27Q7Z3Y8 459 aa22.46■■□□□ 1.19
KRT4-201ENST00000548097 CDCA7LQ96GN5 454 aa22.46■■□□□ 1.19
KRT4-201ENST00000548097 LAS1LQ9Y4W2 734 aaKnown RBP22.46■■□□□ 1.19
KRT4-201ENST00000548097 SCN11AQ9UI33 1791 aa22.46■■□□□ 1.19
KRT4-201ENST00000548097 HTATSF1O43719 755 aaKnown RBP22.45■■□□□ 1.19
KRT4-201ENST00000548097 ZBED9Q6R2W3 1325 aa22.45■■□□□ 1.19
KRT4-201ENST00000548097 EP400Q96L91 3159 aa22.45■■□□□ 1.18
KRT4-201ENST00000548097 KAT6BQ8WYB5 2073 aa22.45■■□□□ 1.18
KRT4-201ENST00000548097 MIS18AQ9NYP9 233 aa22.45■■□□□ 1.18
KRT4-201ENST00000548097 CEMIPQ8WUJ3 1361 aa22.44■■□□□ 1.18
KRT4-201ENST00000548097 HSP90AB1P08238 724 aaKnown RBP22.44■■□□□ 1.18
KRT4-201ENST00000548097 SYTL4Q96C24 671 aaPredicted RBP22.44■■□□□ 1.18
KRT4-201ENST00000548097 NFATC2IPQ8NCF5 419 aa22.43■■□□□ 1.18
KRT4-201ENST00000548097 DOT1LQ8TEK3 1739 aa22.43■■□□□ 1.18
KRT4-201ENST00000548097 ADAMTS7Q9UKP4 1686 aa22.43■■□□□ 1.18
KRT4-201ENST00000548097 KCNQ2O43526 872 aa22.42■■□□□ 1.18
KRT4-201ENST00000548097 TEFQ10587 303 aa22.42■■□□□ 1.18
KRT4-201ENST00000548097 PTF1AQ7RTS3 328 aa22.42■■□□□ 1.18
KRT4-201ENST00000548097 PRIM1P49642 420 aaKnown RBP22.41■■□□□ 1.18
KRT4-201ENST00000548097 CABP4P57796 275 aa22.41■■□□□ 1.18
KRT4-201ENST00000548097 NGEFQ8N5V2 710 aa22.41■■□□□ 1.18
KRT4-201ENST00000548097 NCBP3Q53F19 620 aaKnown RBP22.41■■□□□ 1.18
KRT4-201ENST00000548097 SLC52A2Q9HAB3 445 aa22.41■■□□□ 1.18
KRT4-201ENST00000548097 WDR63Q8IWG1 891 aa22.4■■□□□ 1.18
KRT4-201ENST00000548097 GOLGA2Q08379 1002 aa22.39■■□□□ 1.17
KRT4-201ENST00000548097 TSR2Q969E8 191 aaKnown RBP22.39■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms