RNA–Protein interactions for RNA: ENST00000547950.1

SCAF11-211, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-211ENST00000547950 PIK3C2AO00443 1686 aa9.36□□□□□ -0.91
SCAF11-211ENST00000547950 MAP3K13O43283 966 aa9.36□□□□□ -0.91
SCAF11-211ENST00000547950 IP6K1Q92551 441 aa9.36□□□□□ -0.91
SCAF11-211ENST00000547950 GGNBP2Q9H3C7 697 aa9.36□□□□□ -0.91
SCAF11-211ENST00000547950 OVOS2A0A0G2JMS6 1433 aa9.36□□□□□ -0.91
SCAF11-211ENST00000547950 OVOS2A0A0J9YW53 1432 aa9.36□□□□□ -0.91
SCAF11-211ENST00000547950 OVOS2Q6IE36 1432 aa9.36□□□□□ -0.91
SCAF11-211ENST00000547950 PARD3Q8TEW0 1356 aa9.36□□□□□ -0.91
SCAF11-211ENST00000547950 USP47Q96K76 1375 aa9.36□□□□□ -0.91
SCAF11-211ENST00000547950 CCDC7Q96M83 1385 aa9.36□□□□□ -0.91
SCAF11-211ENST00000547950 ERBB3P21860 1342 aa9.35□□□□□ -0.91
SCAF11-211ENST00000547950 PLSCR1O15162 318 aa9.35□□□□□ -0.91
SCAF11-211ENST00000547950 ATMINO43313 823 aaPredicted RBP9.35□□□□□ -0.91
SCAF11-211ENST00000547950 KCNQ2O43526 872 aa9.35□□□□□ -0.91
SCAF11-211ENST00000547950 IL2RBP14784 551 aa9.35□□□□□ -0.91
SCAF11-211ENST00000547950 AMPHP49418 695 aa9.35□□□□□ -0.91
SCAF11-211ENST00000547950 CDCA8Q53HL2 280 aa9.35□□□□□ -0.91
SCAF11-211ENST00000547950 ACSBG1Q96GR2 724 aa9.35□□□□□ -0.91
SCAF11-211ENST00000547950 TIMELESSQ9UNS1 1208 aa9.35□□□□□ -0.91
SCAF11-211ENST00000547950 FYB1O15117 783 aa9.34□□□□□ -0.91
SCAF11-211ENST00000547950 ASTLQ6HA08 431 aaPredicted RBP9.34□□□□□ -0.91
SCAF11-211ENST00000547950 POLR3GLQ9BT43 218 aa9.34□□□□□ -0.91
SCAF11-211ENST00000547950 FBXO3Q9UK99 471 aa9.34□□□□□ -0.91
SCAF11-211ENST00000547950 NFAT5O94916 1531 aa9.34□□□□□ -0.91
SCAF11-211ENST00000547950 NINLQ9Y2I6 1382 aa9.34□□□□□ -0.91
SCAF11-211ENST00000547950 MAP3K19Q56UN5 1328 aa9.33□□□□□ -0.92
SCAF11-211ENST00000547950 HOXC9P31274 260 aa9.33□□□□□ -0.92
SCAF11-211ENST00000547950 RRS1Q15050 365 aaKnown RBP9.33□□□□□ -0.92
SCAF11-211ENST00000547950 CCER1Q8TC90 406 aaPredicted RBP9.33□□□□□ -0.92
SCAF11-211ENST00000547950 DDX54Q8TDD1 881 aaKnown RBP9.33□□□□□ -0.92
SCAF11-211ENST00000547950 ANKRD36BQ8N2N9 1353 aa9.33□□□□□ -0.92
SCAF11-211ENST00000547950 NUBP1P53384 320 aa9.32□□□□□ -0.92
SCAF11-211ENST00000547950 TXNRD1Q16881 649 aa9.32□□□□□ -0.92
SCAF11-211ENST00000547950 CARD14Q9BXL6 1004 aa9.32□□□□□ -0.92
SCAF11-211ENST00000547950 METRNQ9UJH8 293 aa9.32□□□□□ -0.92
SCAF11-211ENST00000547950 TRPC6Q9Y210 931 aa9.32□□□□□ -0.92
SCAF11-211ENST00000547950 COL18A1P39060 1754 aa9.32□□□□□ -0.92
SCAF11-211ENST00000547950 RGPD1P0DJD0 1748 aa9.31□□□□□ -0.92
SCAF11-211ENST00000547950 POTEB2H3BUK9 544 aa9.31□□□□□ -0.92
SCAF11-211ENST00000547950 ATN1P54259 1190 aaPredicted RBP9.31□□□□□ -0.92
SCAF11-211ENST00000547950 CLSPNQ9HAW4 1339 aa9.31□□□□□ -0.92
SCAF11-211ENST00000547950 AKAP12Q02952 1782 aa9.3□□□□□ -0.92
SCAF11-211ENST00000547950 SLC39A7Q92504 469 aa9.3□□□□□ -0.92
SCAF11-211ENST00000547950 FAM212AQ96EL1 285 aa9.3□□□□□ -0.92
SCAF11-211ENST00000547950 PDGFDQ9GZP0 370 aaPredicted RBP9.3□□□□□ -0.92
SCAF11-211ENST00000547950 SPON1Q9HCB6 807 aa9.3□□□□□ -0.92
SCAF11-211ENST00000547950 ANO8Q9HCE9 1232 aaPredicted RBP9.3□□□□□ -0.92
SCAF11-211ENST00000547950 STK32BQ9NY57 414 aa9.3□□□□□ -0.92
SCAF11-211ENST00000547950 PPP1R1BQ9UD71 204 aaPredicted RBP9.3□□□□□ -0.92
SCAF11-211ENST00000547950 BCL9O00512 1426 aa9.3□□□□□ -0.92
SCAF11-211ENST00000547950 PPM1GO15355 546 aaPredicted RBP9.29□□□□□ -0.92
SCAF11-211ENST00000547950 HSP90AB2PQ58FF8 381 aa9.29□□□□□ -0.92
SCAF11-211ENST00000547950 NBPF6Q5VWK0 638 aa9.29□□□□□ -0.92
SCAF11-211ENST00000547950 USHBP1Q8N6Y0 703 aa9.29□□□□□ -0.92
SCAF11-211ENST00000547950 SYTL4Q96C24 671 aaPredicted RBP9.29□□□□□ -0.92
SCAF11-211ENST00000547950 NBPF4Q96M43 638 aa9.29□□□□□ -0.92
SCAF11-211ENST00000547950 TNS1Q9HBL0 1735 aaKnown RBP9.28□□□□□ -0.92
SCAF11-211ENST00000547950 ZBTB7AO95365 584 aa9.28□□□□□ -0.92
SCAF11-211ENST00000547950 C7P10643 843 aa9.28□□□□□ -0.92
SCAF11-211ENST00000547950 PRIM1P49642 420 aaKnown RBP9.28□□□□□ -0.92
SCAF11-211ENST00000547950 SLC15A2Q16348 729 aa9.28□□□□□ -0.92
SCAF11-211ENST00000547950 ZCRB1Q8TBF4 217 aaKnown RBP9.28□□□□□ -0.92
SCAF11-211ENST00000547950 BMP2KQ9NSY1 1161 aaPredicted RBP9.28□□□□□ -0.92
SCAF11-211ENST00000547950 PCDHB13Q9Y5F0 798 aa9.28□□□□□ -0.92
SCAF11-211ENST00000547950 TNS2Q63HR2 1409 aa9.28□□□□□ -0.92
SCAF11-211ENST00000547950 MON2Q7Z3U7 1717 aa9.28□□□□□ -0.92
SCAF11-211ENST00000547950 PARP4Q9UKK3 1724 aaKnown RBP9.28□□□□□ -0.92
SCAF11-211ENST00000547950 LRRC37A3O60309 1634 aa9.27□□□□□ -0.92
SCAF11-211ENST00000547950 ABCC6O95255 1503 aa9.27□□□□□ -0.93
SCAF11-211ENST00000547950 HSPA5P11021 654 aaKnown RBP9.27□□□□□ -0.93
SCAF11-211ENST00000547950 EIF4G2P78344 907 aaKnown RBP eCLIP9.27□□□□□ -0.93
SCAF11-211ENST00000547950 DCAF8Q5TAQ9 597 aa9.27□□□□□ -0.93
SCAF11-211ENST00000547950 RAPGEF4Q8WZA2 1011 aa9.27□□□□□ -0.93
SCAF11-211ENST00000547950 TNNT2P45379 298 aaPredicted RBP9.26□□□□□ -0.93
SCAF11-211ENST00000547950 KLHL34Q8N239 644 aa9.26□□□□□ -0.93
SCAF11-211ENST00000547950 OTUD5Q96G74 571 aa9.26□□□□□ -0.93
SCAF11-211ENST00000547950 EMILIN1Q9Y6C2 1016 aa9.26□□□□□ -0.93
SCAF11-211ENST00000547950 PEAK1Q9H792 1746 aa9.25□□□□□ -0.93
SCAF11-211ENST00000547950 NSD3Q9BZ95 1437 aa9.25□□□□□ -0.93
SCAF11-211ENST00000547950 TATP17735 454 aaPredicted RBP9.25□□□□□ -0.93
SCAF11-211ENST00000547950 KCNQ4P56696 695 aa9.25□□□□□ -0.93
SCAF11-211ENST00000547950 LRRC4BQ9NT99 713 aa9.25□□□□□ -0.93
SCAF11-211ENST00000547950 TIE1P35590 1138 aa9.24□□□□□ -0.93
SCAF11-211ENST00000547950 PANK3Q9H999 370 aa9.24□□□□□ -0.93
SCAF11-211ENST00000547950 CGNL1Q0VF96 1302 aa9.24□□□□□ -0.93
SCAF11-211ENST00000547950 RGPD5Q99666 1765 aa9.24□□□□□ -0.93
SCAF11-211ENST00000547950 RTL1A6NKG5 1358 aa9.24□□□□□ -0.93
SCAF11-211ENST00000547950 INSRP06213 1382 aa9.24□□□□□ -0.93
SCAF11-211ENST00000547950 SMG6Q86US8 1419 aaKnown RBP9.23□□□□□ -0.93
SCAF11-211ENST00000547950 VASPP50552 380 aaPredicted RBP9.23□□□□□ -0.93
SCAF11-211ENST00000547950 LRP5O75197 1615 aa9.23□□□□□ -0.93
SCAF11-211ENST00000547950 FLT4P35916 1363 aa9.23□□□□□ -0.93
SCAF11-211ENST00000547950 PTGER2P43116 358 aa9.22□□□□□ -0.93
SCAF11-211ENST00000547950 ZNF827Q17R98 1081 aa9.22□□□□□ -0.93
SCAF11-211ENST00000547950 SLC27A3Q5K4L6 730 aa9.22□□□□□ -0.93
SCAF11-211ENST00000547950 TFCP2L1Q9NZI6 479 aa9.22□□□□□ -0.93
SCAF11-211ENST00000547950 POLKQ9UBT6 870 aa9.22□□□□□ -0.93
SCAF11-211ENST00000547950 MEGF6O75095 1541 aa9.21□□□□□ -0.93
SCAF11-211ENST00000547950 USP54Q70EL1 1684 aa9.21□□□□□ -0.93
SCAF11-211ENST00000547950 TTLL13PA6NNM8 815 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 248.5 ms