RNA–Protein interactions for RNA: ENST00000547861.5

CCDC65-203, Transcript of coiled-coil domain containing 65, humanhuman

TSL 2

Gene CCDC65, Length 1,746 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65-203ENST00000547861 BRWD3Q6RI45 1802 aa10.62□□□□□ -0.71
CCDC65-203ENST00000547861 VPS72Q15906 364 aa10.62□□□□□ -0.71
CCDC65-203ENST00000547861 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.62□□□□□ -0.71
CCDC65-203ENST00000547861 RUNDC1Q96C34 613 aa10.62□□□□□ -0.71
CCDC65-203ENST00000547861 ABCA3Q99758 1704 aa10.62□□□□□ -0.71
CCDC65-203ENST00000547861 RGPD1P0DJD0 1748 aa10.61□□□□□ -0.71
CCDC65-203ENST00000547861 FAM83GA6ND36 823 aa10.61□□□□□ -0.71
CCDC65-203ENST00000547861 SLFN5Q08AF3 891 aa10.61□□□□□ -0.71
CCDC65-203ENST00000547861 SEPT12Q8IYM1 358 aa10.61□□□□□ -0.71
CCDC65-203ENST00000547861 TSHZ2Q9NRE2 1034 aa10.61□□□□□ -0.71
CCDC65-203ENST00000547861 CCDC61Q9Y6R9 512 aa10.61□□□□□ -0.71
CCDC65-203ENST00000547861 NWD2Q9ULI1 1742 aa10.61□□□□□ -0.71
CCDC65-203ENST00000547861 OVOS2A0A0J9YW53 1432 aa10.61□□□□□ -0.71
CCDC65-203ENST00000547861 USP6P35125 1406 aa10.61□□□□□ -0.71
CCDC65-203ENST00000547861 OVOS2Q6IE36 1432 aa10.61□□□□□ -0.71
CCDC65-203ENST00000547861 B4GALNT3Q6L9W6 998 aa10.61□□□□□ -0.71
CCDC65-203ENST00000547861 TRMT2AQ8IZ69 625 aaKnown RBP10.61□□□□□ -0.71
CCDC65-203ENST00000547861 TSPYL2Q9H2G4 693 aaPredicted RBP10.61□□□□□ -0.71
CCDC65-203ENST00000547861 NME9Q86XW9 330 aa10.6□□□□□ -0.71
CCDC65-203ENST00000547861 TRPM3Q9HCF6 1732 aaPredicted RBP10.6□□□□□ -0.71
CCDC65-203ENST00000547861 LTN1O94822 1766 aa10.6□□□□□ -0.71
CCDC65-203ENST00000547861 NGDNQ8NEJ9 315 aaKnown RBP10.59□□□□□ -0.71
CCDC65-203ENST00000547861 AATKQ6ZMQ8 1374 aa10.59□□□□□ -0.71
CCDC65-203ENST00000547861 E9PSI1 815 aa10.58□□□□□ -0.72
CCDC65-203ENST00000547861 ONECUT3O60422 494 aaPredicted RBP10.58□□□□□ -0.72
CCDC65-203ENST00000547861 U2AF1L5P0DN76 240 aaPredicted RBP10.58□□□□□ -0.72
CCDC65-203ENST00000547861 U2AF1Q01081 240 aaKnown RBP eCLIP10.58□□□□□ -0.72
CCDC65-203ENST00000547861 TCP11L2Q8N4U5 519 aa10.58□□□□□ -0.72
CCDC65-203ENST00000547861 BTG4Q9NY30 223 aa10.58□□□□□ -0.72
CCDC65-203ENST00000547861 ALS2Q96Q42 1657 aa10.58□□□□□ -0.72
CCDC65-203ENST00000547861 SSH2Q76I76 1423 aa10.58□□□□□ -0.72
CCDC65-203ENST00000547861 A0A0G2JS52 829 aa10.58□□□□□ -0.72
CCDC65-203ENST00000547861 KRT27Q7Z3Y8 459 aa10.58□□□□□ -0.72
CCDC65-203ENST00000547861 DEFB132Q7Z7B7 95 aa10.58□□□□□ -0.72
CCDC65-203ENST00000547861 WWC1Q8IX03 1113 aa10.58□□□□□ -0.72
CCDC65-203ENST00000547861 RRP7AQ9Y3A4 280 aaKnown RBP10.58□□□□□ -0.72
CCDC65-203ENST00000547861 EIF5BO60841 1220 aaKnown RBP10.57□□□□□ -0.72
CCDC65-203ENST00000547861 FAM98CQ17RN3 349 aaKnown RBP10.57□□□□□ -0.72
CCDC65-203ENST00000547861 KIF12Q96FN5 646 aa10.57□□□□□ -0.72
CCDC65-203ENST00000547861 ARXQ96QS3 562 aa10.57□□□□□ -0.72
CCDC65-203ENST00000547861 POLKQ9UBT6 870 aa10.57□□□□□ -0.72
CCDC65-203ENST00000547861 ACEP12821 1306 aa10.57□□□□□ -0.72
CCDC65-203ENST00000547861 PLEKHG3A1L390 1219 aa10.56□□□□□ -0.72
CCDC65-203ENST00000547861 POTEMA6NI47 508 aa10.56□□□□□ -0.72
CCDC65-203ENST00000547861 U2SURPO15042 1029 aaKnown RBP10.56□□□□□ -0.72
CCDC65-203ENST00000547861 DIAPH1O60610 1272 aaKnown RBP10.56□□□□□ -0.72
CCDC65-203ENST00000547861 POTEJP0CG39 1038 aa10.56□□□□□ -0.72
CCDC65-203ENST00000547861 SF3B2Q13435 895 aaKnown RBP10.56□□□□□ -0.72
CCDC65-203ENST00000547861 CCDC27Q2M243 656 aa10.56□□□□□ -0.72
CCDC65-203ENST00000547861 EXOC6Q8TAG9 804 aa10.56□□□□□ -0.72
CCDC65-203ENST00000547861 NRAPQ86VF7 1730 aa10.56□□□□□ -0.72
CCDC65-203ENST00000547861 PLIN1O60240 522 aa10.55□□□□□ -0.72
CCDC65-203ENST00000547861 COL14A1Q05707 1796 aaKnown RBP10.55□□□□□ -0.72
CCDC65-203ENST00000547861 TTC21BQ7Z4L5 1316 aa10.55□□□□□ -0.72
CCDC65-203ENST00000547861 COG3Q96JB2 828 aa10.55□□□□□ -0.72
CCDC65-203ENST00000547861 PLEKHF1Q96S99 279 aa10.55□□□□□ -0.72
CCDC65-203ENST00000547861 FBLN1P23142 703 aa10.55□□□□□ -0.72
CCDC65-203ENST00000547861 NEUROD2Q15784 382 aa10.55□□□□□ -0.72
CCDC65-203ENST00000547861 MAMSTRQ6ZN01 415 aa10.55□□□□□ -0.72
CCDC65-203ENST00000547861 CCDC136Q96JN2 1154 aa10.55□□□□□ -0.72
CCDC65-203ENST00000547861 EMILIN1Q9Y6C2 1016 aa10.55□□□□□ -0.72
CCDC65-203ENST00000547861 ATN1P54259 1190 aaPredicted RBP10.54□□□□□ -0.72
CCDC65-203ENST00000547861 PRDM11Q9NQV5 511 aa10.54□□□□□ -0.72
CCDC65-203ENST00000547861 CRYBG1Q9Y4K1 1723 aa10.54□□□□□ -0.72
CCDC65-203ENST00000547861 MAPK8IP3Q9UPT6 1336 aa10.53□□□□□ -0.72
CCDC65-203ENST00000547861 NUTM2GQ5VZR2 741 aa10.53□□□□□ -0.72
CCDC65-203ENST00000547861 WDR63Q8IWG1 891 aa10.53□□□□□ -0.72
CCDC65-203ENST00000547861 VIRMAQ69YN4 1812 aaKnown RBP10.53□□□□□ -0.72
CCDC65-203ENST00000547861 USP31Q70CQ4 1352 aa10.53□□□□□ -0.72
CCDC65-203ENST00000547861 SPATA31A5Q5VU36 1347 aa10.53□□□□□ -0.72
CCDC65-203ENST00000547861 SPATA31A7Q8IWB4 1347 aa10.53□□□□□ -0.72
CCDC65-203ENST00000547861 FAM182BQ5T319 152 aa10.53□□□□□ -0.72
CCDC65-203ENST00000547861 POTEGQ6S5H5 508 aa10.53□□□□□ -0.72
CCDC65-203ENST00000547861 CRBNQ96SW2 442 aa10.53□□□□□ -0.72
CCDC65-203ENST00000547861 KIAA0232Q92628 1395 aa10.52□□□□□ -0.73
CCDC65-203ENST00000547861 TTC21AQ8NDW8 1320 aa10.52□□□□□ -0.73
CCDC65-203ENST00000547861 PPM1GO15355 546 aaPredicted RBP10.52□□□□□ -0.73
CCDC65-203ENST00000547861 TMPOP42166 694 aaKnown RBP10.52□□□□□ -0.73
CCDC65-203ENST00000547861 ZC3H6P61129 1189 aaKnown RBP10.52□□□□□ -0.73
CCDC65-203ENST00000547861 CHRNA2Q15822 529 aa10.52□□□□□ -0.73
CCDC65-203ENST00000547861 C20orf194Q5TEA3 1177 aa10.52□□□□□ -0.73
CCDC65-203ENST00000547861 RSPH6AQ9H0K4 717 aa10.52□□□□□ -0.73
CCDC65-203ENST00000547861 RGPD2P0DJD1 1756 aa10.51□□□□□ -0.73
CCDC65-203ENST00000547861 RRS1Q15050 365 aaKnown RBP10.51□□□□□ -0.73
CCDC65-203ENST00000547861 PHRF1Q9P1Y6 1649 aaKnown RBP10.51□□□□□ -0.73
CCDC65-203ENST00000547861 IL13P35225 146 aa10.5□□□□□ -0.73
CCDC65-203ENST00000547861 BAG6P46379 1132 aa10.5□□□□□ -0.73
CCDC65-203ENST00000547861 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.5□□□□□ -0.73
CCDC65-203ENST00000547861 STRN4Q9NRL3 753 aa10.5□□□□□ -0.73
CCDC65-203ENST00000547861 PRKAR2BP31323 418 aa10.5□□□□□ -0.73
CCDC65-203ENST00000547861 PNNQ9H307 717 aaKnown RBP10.5□□□□□ -0.73
CCDC65-203ENST00000547861 BMP2KQ9NSY1 1161 aaPredicted RBP10.5□□□□□ -0.73
CCDC65-203ENST00000547861 TRIM35Q9UPQ4 493 aa10.5□□□□□ -0.73
CCDC65-203ENST00000547861 SPATA31A1Q5TZJ5 1347 aa10.49□□□□□ -0.73
CCDC65-203ENST00000547861 FCHSD2O94868 740 aa10.49□□□□□ -0.73
CCDC65-203ENST00000547861 EN1Q05925 392 aaPredicted RBP10.49□□□□□ -0.73
CCDC65-203ENST00000547861 BCL11AQ9H165 835 aa10.49□□□□□ -0.73
CCDC65-203ENST00000547861 THSD7AQ9UPZ6 1657 aa10.49□□□□□ -0.73
CCDC65-203ENST00000547861 LRRC37A3O60309 1634 aa10.49□□□□□ -0.73
CCDC65-203ENST00000547861 FANCIQ9NVI1 1328 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms