RNA–Protein interactions for RNA: ENST00000547853.1

CDK4-205, Transcript of cyclin dependent kinase 4, humanhuman

TSL 3

Gene CDK4, Length 228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-205ENST00000547853 SLC27A3Q5K4L6 730 aa13.43□□□□□ -0.26
CDK4-205ENST00000547853 KCNH5Q8NCM2 988 aa13.43□□□□□ -0.26
CDK4-205ENST00000547853 GPBP1L1Q9HC44 474 aaPredicted RBP13.43□□□□□ -0.26
CDK4-205ENST00000547853 CABP1Q9NZU7 370 aa13.43□□□□□ -0.26
CDK4-205ENST00000547853 SOX12O15370 315 aa13.42□□□□□ -0.26
CDK4-205ENST00000547853 UBR3Q6ZT12 1888 aa13.42□□□□□ -0.26
CDK4-205ENST00000547853 KIAA1551Q9HCM1 1747 aa13.42□□□□□ -0.26
CDK4-205ENST00000547853 TTC21BQ7Z4L5 1316 aa13.41□□□□□ -0.26
CDK4-205ENST00000547853 IL2RBP14784 551 aa13.4□□□□□ -0.26
CDK4-205ENST00000547853 DDX10Q13206 875 aaKnown RBP13.4□□□□□ -0.26
CDK4-205ENST00000547853 NBPF1Q3BBV0 1214 aa13.4□□□□□ -0.26
CDK4-205ENST00000547853 TTC21AQ8NDW8 1320 aa13.39□□□□□ -0.27
CDK4-205ENST00000547853 KIF13BQ9NQT8 1826 aa13.39□□□□□ -0.27
CDK4-205ENST00000547853 KCNQ4P56696 695 aa13.39□□□□□ -0.27
CDK4-205ENST00000547853 ZNF526Q8TF50 670 aaPredicted RBP13.39□□□□□ -0.27
CDK4-205ENST00000547853 SIN3AQ96ST3 1273 aa13.39□□□□□ -0.27
CDK4-205ENST00000547853 TFCP2L1Q9NZI6 479 aa13.39□□□□□ -0.27
CDK4-205ENST00000547853 ANKRD36BQ8N2N9 1353 aa13.38□□□□□ -0.27
CDK4-205ENST00000547853 TSHZ2Q9NRE2 1034 aa13.38□□□□□ -0.27
CDK4-205ENST00000547853 C4BP0C0L5 1744 aa13.38□□□□□ -0.27
CDK4-205ENST00000547853 PCNTO95613 3336 aa13.38□□□□□ -0.27
CDK4-205ENST00000547853 USP31Q70CQ4 1352 aa13.37□□□□□ -0.27
CDK4-205ENST00000547853 KIF3CO14782 793 aa13.37□□□□□ -0.27
CDK4-205ENST00000547853 CD163L1Q9NR16 1453 aa13.36□□□□□ -0.27
CDK4-205ENST00000547853 BRCA1P38398 1863 aaKnown RBP13.36□□□□□ -0.27
CDK4-205ENST00000547853 NLRP2Q9NX02 1062 aa13.36□□□□□ -0.27
CDK4-205ENST00000547853 PKD1L3Q7Z443 1732 aa13.36□□□□□ -0.27
CDK4-205ENST00000547853 ERICH6BQ5W0A0 696 aa13.35□□□□□ -0.27
CDK4-205ENST00000547853 MSL1Q68DK7 614 aa13.35□□□□□ -0.27
CDK4-205ENST00000547853 ITGB4P16144 1822 aa13.34□□□□□ -0.27
CDK4-205ENST00000547853 MEGF6O75095 1541 aa13.34□□□□□ -0.27
CDK4-205ENST00000547853 KTN1Q86UP2 1357 aaKnown RBP13.34□□□□□ -0.27
CDK4-205ENST00000547853 COL23A1Q86Y22 540 aaPredicted RBP13.34□□□□□ -0.27
CDK4-205ENST00000547853 CD2APQ9Y5K6 639 aa13.34□□□□□ -0.27
CDK4-205ENST00000547853 N4BP2Q86UW6 1770 aaPredicted RBP13.33□□□□□ -0.28
CDK4-205ENST00000547853 APLP1P51693 650 aa13.33□□□□□ -0.28
CDK4-205ENST00000547853 DNAJC5GQ8N7S2 189 aa13.33□□□□□ -0.28
CDK4-205ENST00000547853 ANKRD24Q8TF21 1146 aa13.33□□□□□ -0.28
CDK4-205ENST00000547853 EVC2Q86UK5 1308 aa13.33□□□□□ -0.28
CDK4-205ENST00000547853 SBNO2Q9Y2G9 1366 aa13.32□□□□□ -0.28
CDK4-205ENST00000547853 MAP2P11137 1827 aaKnown RBP13.32□□□□□ -0.28
CDK4-205ENST00000547853 CCNL1Q9UK58 526 aaPredicted RBP13.32□□□□□ -0.28
CDK4-205ENST00000547853 ZNF692Q9BU19 519 aaPredicted RBP13.31□□□□□ -0.28
CDK4-205ENST00000547853 IGSF1Q8N6C5 1336 aa13.31□□□□□ -0.28
CDK4-205ENST00000547853 PRIM1P49642 420 aaKnown RBP13.3□□□□□ -0.28
CDK4-205ENST00000547853 ANP32EQ9BTT0 268 aa13.3□□□□□ -0.28
CDK4-205ENST00000547853 ARFGEF1Q9Y6D6 1849 aa13.29□□□□□ -0.28
CDK4-205ENST00000547853 TNRC6CQ9HCJ0 1690 aaKnown RBP13.29□□□□□ -0.28
CDK4-205ENST00000547853 MSH5O43196 834 aa13.29□□□□□ -0.28
CDK4-205ENST00000547853 FKBP8Q14318 412 aa13.29□□□□□ -0.28
CDK4-205ENST00000547853 DDX54Q8TDD1 881 aaKnown RBP13.29□□□□□ -0.28
CDK4-205ENST00000547853 SYTL4Q96C24 671 aaPredicted RBP13.29□□□□□ -0.28
CDK4-205ENST00000547853 COL13A1Q5TAT6 717 aaPredicted RBP13.28□□□□□ -0.28
CDK4-205ENST00000547853 NME9Q86XW9 330 aa13.28□□□□□ -0.28
CDK4-205ENST00000547853 USP47Q96K76 1375 aa13.28□□□□□ -0.28
CDK4-205ENST00000547853 PXDNLA1KZ92 1463 aa13.28□□□□□ -0.28
CDK4-205ENST00000547853 EDC4Q6P2E9 1401 aaKnown RBP13.27□□□□□ -0.29
CDK4-205ENST00000547853 AMIGO3Q86WK7 504 aa13.26□□□□□ -0.29
CDK4-205ENST00000547853 WWC3Q9ULE0 1092 aa13.26□□□□□ -0.29
CDK4-205ENST00000547853 CAPN15O75808 1086 aa13.25□□□□□ -0.29
CDK4-205ENST00000547853 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.25□□□□□ -0.29
CDK4-205ENST00000547853 PALLDQ8WX93 1383 aa13.24□□□□□ -0.29
CDK4-205ENST00000547853 TOMM70O94826 608 aa13.24□□□□□ -0.29
CDK4-205ENST00000547853 EIF4G2P78344 907 aaKnown RBP eCLIP13.24□□□□□ -0.29
CDK4-205ENST00000547853 JMYQ8N9B5 988 aa13.24□□□□□ -0.29
CDK4-205ENST00000547853 C4AP0C0L4 1744 aa13.23□□□□□ -0.29
CDK4-205ENST00000547853 NSD3Q9BZ95 1437 aa13.22□□□□□ -0.29
CDK4-205ENST00000547853 A0A1W2PP64 1363 aa13.22□□□□□ -0.29
CDK4-205ENST00000547853 PRELPP51888 382 aa13.22□□□□□ -0.29
CDK4-205ENST00000547853 FLAD1Q8NFF5 587 aa13.22□□□□□ -0.29
CDK4-205ENST00000547853 IP6K1Q92551 441 aa13.22□□□□□ -0.29
CDK4-205ENST00000547853 KLRG1Q96E93 195 aa13.22□□□□□ -0.29
CDK4-205ENST00000547853 SBF1O95248 1867 aa13.22□□□□□ -0.29
CDK4-205ENST00000547853 C10orf71Q711Q0 1435 aa13.22□□□□□ -0.29
CDK4-205ENST00000547853 HTRA3P83110 453 aa13.21□□□□□ -0.29
CDK4-205ENST00000547853 NMRK2Q9NPI5 230 aa13.21□□□□□ -0.29
CDK4-205ENST00000547853 COL5A3P25940 1745 aaPredicted RBP13.21□□□□□ -0.3
CDK4-205ENST00000547853 ZCRB1Q8TBF4 217 aaKnown RBP13.2□□□□□ -0.3
CDK4-205ENST00000547853 LTV1Q96GA3 475 aaPredicted RBP13.2□□□□□ -0.3
CDK4-205ENST00000547853 RTL1A6NKG5 1358 aa13.2□□□□□ -0.3
CDK4-205ENST00000547853 ROCK2O75116 1388 aaKnown RBP13.2□□□□□ -0.3
CDK4-205ENST00000547853 TNS4Q8IZW8 715 aa13.19□□□□□ -0.3
CDK4-205ENST00000547853 RBM46Q8TBY0 533 aaKnown RBP13.19□□□□□ -0.3
CDK4-205ENST00000547853 PLEKHG2Q9H7P9 1386 aa13.19□□□□□ -0.3
CDK4-205ENST00000547853 KCPQ6ZWJ8 1503 aa13.18□□□□□ -0.3
CDK4-205ENST00000547853 ZNF831Q5JPB2 1677 aa13.18□□□□□ -0.3
CDK4-205ENST00000547853 KIF20BQ96Q89 1820 aa13.18□□□□□ -0.3
CDK4-205ENST00000547853 MAP3K19Q56UN5 1328 aa13.18□□□□□ -0.3
CDK4-205ENST00000547853 HOXC9P31274 260 aa13.18□□□□□ -0.3
CDK4-205ENST00000547853 TIAM2Q8IVF5 1701 aa13.18□□□□□ -0.3
CDK4-205ENST00000547853 ANKRD26Q9UPS8 1709 aa13.17□□□□□ -0.3
CDK4-205ENST00000547853 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.17□□□□□ -0.3
CDK4-205ENST00000547853 HSPA5P11021 654 aaKnown RBP13.17□□□□□ -0.3
CDK4-205ENST00000547853 SMIM5Q71RC9 77 aa13.17□□□□□ -0.3
CDK4-205ENST00000547853 AK7Q96M32 723 aa13.17□□□□□ -0.3
CDK4-205ENST00000547853 PHF14O94880 888 aa13.16□□□□□ -0.3
CDK4-205ENST00000547853 CGNL1Q0VF96 1302 aa13.15□□□□□ -0.3
CDK4-205ENST00000547853 WASHC2AQ641Q2 1341 aa13.15□□□□□ -0.3
CDK4-205ENST00000547853 PCDH11XQ9BZA7 1347 aa13.14□□□□□ -0.31
CDK4-205ENST00000547853 PCDH11YQ9BZA8 1340 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms