RNA–Protein interactions for RNA: ENST00000547605.5

RBFOX1-210, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best)

Gene RBFOX1, Length 1,811 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-210ENST00000547605 CRB1P82279 1406 aa28.75■■■□□ 2.19
RBFOX1-210ENST00000547605 RTF1Q92541 710 aaKnown RBP28.74■■■□□ 2.19
RBFOX1-210ENST00000547605 THUMPD2Q9BTF0 503 aaKnown RBP28.73■■■□□ 2.19
RBFOX1-210ENST00000547605 DCTN1Q14203 1278 aa28.73■■■□□ 2.19
RBFOX1-210ENST00000547605 NGLY1Q96IV0 654 aa28.73■■■□□ 2.19
RBFOX1-210ENST00000547605 GNAT3A8MTJ3 354 aa28.71■■■□□ 2.19
RBFOX1-210ENST00000547605 CALD1Q05682 793 aaKnown RBP28.71■■■□□ 2.19
RBFOX1-210ENST00000547605 MEX3CQ5U5Q3 659 aaKnown RBP28.71■■■□□ 2.19
RBFOX1-210ENST00000547605 ZNF530Q6P9A1 599 aaPredicted RBP28.71■■■□□ 2.19
RBFOX1-210ENST00000547605 MEGF6O75095 1541 aa28.71■■■□□ 2.19
RBFOX1-210ENST00000547605 LRP6O75581 1613 aa28.7■■■□□ 2.19
RBFOX1-210ENST00000547605 DUSP27Q5VZP5 1158 aa28.7■■■□□ 2.18
RBFOX1-210ENST00000547605 MCM10Q7L590 875 aa28.7■■■□□ 2.18
RBFOX1-210ENST00000547605 MAP3K5Q99683 1374 aa28.69■■■□□ 2.18
RBFOX1-210ENST00000547605 NWD2Q9ULI1 1742 aa28.69■■■□□ 2.18
RBFOX1-210ENST00000547605 C1orf141Q5JVX7 400 aa28.69■■■□□ 2.18
RBFOX1-210ENST00000547605 SPG7Q9UQ90 795 aa28.69■■■□□ 2.18
RBFOX1-210ENST00000547605 IL16Q14005 1332 aa28.69■■■□□ 2.18
RBFOX1-210ENST00000547605 SLIT2O94813 1529 aa28.69■■■□□ 2.18
RBFOX1-210ENST00000547605 TRMT2AQ8IZ69 625 aaKnown RBP28.68■■■□□ 2.18
RBFOX1-210ENST00000547605 MYH16Q9H6N6 1097 aa28.68■■■□□ 2.18
RBFOX1-210ENST00000547605 LAS1LQ9Y4W2 734 aaKnown RBP28.68■■■□□ 2.18
RBFOX1-210ENST00000547605 NRAPQ86VF7 1730 aa28.67■■■□□ 2.18
RBFOX1-210ENST00000547605 HTATSF1O43719 755 aaKnown RBP28.67■■■□□ 2.18
RBFOX1-210ENST00000547605 IL2RBP14784 551 aa28.67■■■□□ 2.18
RBFOX1-210ENST00000547605 AKAP4Q5JQC9 854 aa28.66■■■□□ 2.18
RBFOX1-210ENST00000547605 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.65■■■□□ 2.18
RBFOX1-210ENST00000547605 CCDC9Q9Y3X0 531 aaKnown RBP28.65■■■□□ 2.18
RBFOX1-210ENST00000547605 PARP4Q9UKK3 1724 aaKnown RBP28.65■■■□□ 2.18
RBFOX1-210ENST00000547605 PLEKHG2Q9H7P9 1386 aa28.64■■■□□ 2.18
RBFOX1-210ENST00000547605 UNC5CLQ8IV45 518 aa28.64■■■□□ 2.17
RBFOX1-210ENST00000547605 OVOS2A0A0G2JMS6 1433 aa28.63■■■□□ 2.17
RBFOX1-210ENST00000547605 TSR2Q969E8 191 aaKnown RBP28.62■■■□□ 2.17
RBFOX1-210ENST00000547605 GNAI1P63096 354 aa28.62■■■□□ 2.17
RBFOX1-210ENST00000547605 FNBP4Q8N3X1 1017 aaPredicted RBP28.61■■■□□ 2.17
RBFOX1-210ENST00000547605 ZCRB1Q8TBF4 217 aaKnown RBP28.61■■■□□ 2.17
RBFOX1-210ENST00000547605 IFT57Q9NWB7 429 aa28.61■■■□□ 2.17
RBFOX1-210ENST00000547605 FANCIQ9NVI1 1328 aa28.6■■■□□ 2.17
RBFOX1-210ENST00000547605 PKD1L3Q7Z443 1732 aa28.6■■■□□ 2.17
RBFOX1-210ENST00000547605 IL17REQ8NFR9 667 aa28.59■■■□□ 2.17
RBFOX1-210ENST00000547605 SPATA31A1Q5TZJ5 1347 aa28.59■■■□□ 2.17
RBFOX1-210ENST00000547605 MPRIPQ6WCQ1 1025 aa28.59■■■□□ 2.17
RBFOX1-210ENST00000547605 CFAP44Q96MT7 982 aa28.59■■■□□ 2.17
RBFOX1-210ENST00000547605 USP21Q9UK80 565 aa28.59■■■□□ 2.17
RBFOX1-210ENST00000547605 IFNL2Q8IZJ0 200 aa28.58■■■□□ 2.17
RBFOX1-210ENST00000547605 BCL9LQ86UU0 1499 aa28.58■■■□□ 2.17
RBFOX1-210ENST00000547605 PHKG2P15735 406 aa28.57■■■□□ 2.16
RBFOX1-210ENST00000547605 FBXO41Q8TF61 875 aa28.57■■■□□ 2.16
RBFOX1-210ENST00000547605 LGR6Q9HBX8 967 aa28.57■■■□□ 2.16
RBFOX1-210ENST00000547605 SUPT16HQ9Y5B9 1047 aaKnown RBP28.57■■■□□ 2.16
RBFOX1-210ENST00000547605 SPATA31A5Q5VU36 1347 aa28.56■■■□□ 2.16
RBFOX1-210ENST00000547605 SPATA31A7Q8IWB4 1347 aa28.56■■■□□ 2.16
RBFOX1-210ENST00000547605 THRAP3Q9Y2W1 955 aaKnown RBP28.56■■■□□ 2.16
RBFOX1-210ENST00000547605 ZNF853P0CG23 659 aa28.55■■■□□ 2.16
RBFOX1-210ENST00000547605 RCAN3Q9UKA8 241 aa28.55■■■□□ 2.16
RBFOX1-210ENST00000547605 PCDH11XQ9BZA7 1347 aa28.55■■■□□ 2.16
RBFOX1-210ENST00000547605 PCDH11YQ9BZA8 1340 aa28.55■■■□□ 2.16
RBFOX1-210ENST00000547605 CYP27B1O15528 508 aa28.55■■■□□ 2.16
RBFOX1-210ENST00000547605 MBIPQ9NS73 344 aa28.55■■■□□ 2.16
RBFOX1-210ENST00000547605 RNMTO43148 476 aaKnown RBP28.54■■■□□ 2.16
RBFOX1-210ENST00000547605 VPS72Q15906 364 aa28.53■■■□□ 2.16
RBFOX1-210ENST00000547605 DDX54Q8TDD1 881 aaKnown RBP28.53■■■□□ 2.16
RBFOX1-210ENST00000547605 AFF2P51816 1311 aa28.53■■■□□ 2.16
RBFOX1-210ENST00000547605 CEMIPQ8WUJ3 1361 aa28.52■■■□□ 2.16
RBFOX1-210ENST00000547605 DISP2A7MBM2 1401 aa28.52■■■□□ 2.16
RBFOX1-210ENST00000547605 HSP90AB1P08238 724 aaKnown RBP28.52■■■□□ 2.16
RBFOX1-210ENST00000547605 EXOSC9Q06265 439 aaKnown RBP28.52■■■□□ 2.16
RBFOX1-210ENST00000547605 TEFQ10587 303 aa28.52■■■□□ 2.16
RBFOX1-210ENST00000547605 LRRC37A3O60309 1634 aa28.52■■■□□ 2.16
RBFOX1-210ENST00000547605 VIRMAQ69YN4 1812 aaKnown RBP28.51■■■□□ 2.16
RBFOX1-210ENST00000547605 CHL1O00533 1208 aa28.51■■■□□ 2.15
RBFOX1-210ENST00000547605 CDCA7Q9BWT1 371 aaPredicted RBP28.51■■■□□ 2.15
RBFOX1-210ENST00000547605 TAF7Q15545 349 aaPredicted RBP28.5■■■□□ 2.15
RBFOX1-210ENST00000547605 MIS18AQ9NYP9 233 aa28.5■■■□□ 2.15
RBFOX1-210ENST00000547605 WNK3Q9BYP7 1800 aa28.5■■■□□ 2.15
RBFOX1-210ENST00000547605 TSPYL4Q9UJ04 414 aa28.5■■■□□ 2.15
RBFOX1-210ENST00000547605 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.49■■■□□ 2.15
RBFOX1-210ENST00000547605 EXOC5O00471 708 aa28.49■■■□□ 2.15
RBFOX1-210ENST00000547605 DCAF5Q96JK2 942 aa28.48■■■□□ 2.15
RBFOX1-210ENST00000547605 BARGINQ6ZT62 677 aa28.48■■■□□ 2.15
RBFOX1-210ENST00000547605 SHANK3Q9BYB0 1731 aa28.46■■■□□ 2.15
RBFOX1-210ENST00000547605 KDM6AO15550 1401 aaPredicted RBP28.45■■■□□ 2.15
RBFOX1-210ENST00000547605 SCN11AQ9UI33 1791 aa28.45■■■□□ 2.15
RBFOX1-210ENST00000547605 FAM98CQ17RN3 349 aaKnown RBP28.45■■■□□ 2.14
RBFOX1-210ENST00000547605 ADAMTS7Q9UKP4 1686 aa28.44■■■□□ 2.14
RBFOX1-210ENST00000547605 DDB1Q16531 1140 aa28.43■■■□□ 2.14
RBFOX1-210ENST00000547605 BABAM1Q9NWV8 329 aa28.43■■■□□ 2.14
RBFOX1-210ENST00000547605 CT47B1P0C2W7 299 aaPredicted RBP28.43■■■□□ 2.14
RBFOX1-210ENST00000547605 BTBD11A6QL63 1104 aa28.42■■■□□ 2.14
RBFOX1-210ENST00000547605 TRPC5Q9UL62 973 aaPredicted RBP28.42■■■□□ 2.14
RBFOX1-210ENST00000547605 ELL2O00472 640 aaPredicted RBP28.41■■■□□ 2.14
RBFOX1-210ENST00000547605 SLC52A2Q9HAB3 445 aa28.41■■■□□ 2.14
RBFOX1-210ENST00000547605 TNS2Q63HR2 1409 aa28.41■■■□□ 2.14
RBFOX1-210ENST00000547605 A0A0G2JS52 829 aa28.41■■■□□ 2.14
RBFOX1-210ENST00000547605 MYT1Q01538 1121 aa28.41■■■□□ 2.14
RBFOX1-210ENST00000547605 NKX1-1Q15270 411 aaPredicted RBP28.41■■■□□ 2.14
RBFOX1-210ENST00000547605 NEFLP07196 543 aa28.4■■■□□ 2.14
RBFOX1-210ENST00000547605 CABP4P57796 275 aa28.39■■■□□ 2.14
RBFOX1-210ENST00000547605 C8orf58Q8NAV2 365 aa28.39■■■□□ 2.14
RBFOX1-210ENST00000547605 NFATC2IPQ8NCF5 419 aa28.39■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms