RNA–Protein interactions for RNA: ENST00000547530.6

BRF1-211, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRF1, Length 3,358 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-211ENST00000547530 CEP85Q6P2H3 762 aa18.41■□□□□ 0.54
BRF1-211ENST00000547530 ANXA1P04083 346 aa18.41■□□□□ 0.54
BRF1-211ENST00000547530 LRSAM1Q6UWE0 723 aa18.41■□□□□ 0.54
BRF1-211ENST00000547530 PPP1R9BQ96SB3 815 aa18.41■□□□□ 0.54
BRF1-211ENST00000547530 DCTPP1Q9H773 170 aa18.41■□□□□ 0.54
BRF1-211ENST00000547530 MYO5CQ9NQX4 1742 aa18.4■□□□□ 0.54
BRF1-211ENST00000547530 CDC42BPBQ9Y5S2 1711 aa18.4■□□□□ 0.54
BRF1-211ENST00000547530 ABCC11Q96J66 1382 aa18.4■□□□□ 0.54
BRF1-211ENST00000547530 CWC27Q6UX04 472 aaKnown RBP18.4■□□□□ 0.54
BRF1-211ENST00000547530 HMMRO75330 724 aa18.39■□□□□ 0.54
BRF1-211ENST00000547530 HSP90AB2PQ58FF8 381 aa18.39■□□□□ 0.54
BRF1-211ENST00000547530 NOL7Q9UMY1 257 aaKnown RBP18.39■□□□□ 0.54
BRF1-211ENST00000547530 UNC5CLQ8IV45 518 aa18.39■□□□□ 0.53
BRF1-211ENST00000547530 SURF6O75683 361 aaKnown RBP18.39■□□□□ 0.53
BRF1-211ENST00000547530 CEBPZQ03701 1054 aaKnown RBP18.39■□□□□ 0.53
BRF1-211ENST00000547530 STK31Q9BXU1 1019 aa18.39■□□□□ 0.53
BRF1-211ENST00000547530 ADCY5O95622 1261 aa18.38■□□□□ 0.53
BRF1-211ENST00000547530 PDE1AP54750 535 aa18.38■□□□□ 0.53
BRF1-211ENST00000547530 CFAP44Q96MT7 982 aa18.38■□□□□ 0.53
BRF1-211ENST00000547530 ARHGEF5Q12774 1597 aa18.37■□□□□ 0.53
BRF1-211ENST00000547530 KDM5AP29375 1690 aaKnown RBP18.37■□□□□ 0.53
BRF1-211ENST00000547530 STK3Q13188 491 aa18.37■□□□□ 0.53
BRF1-211ENST00000547530 CKAP2LQ8IYA6 745 aa18.36■□□□□ 0.53
BRF1-211ENST00000547530 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.36■□□□□ 0.53
BRF1-211ENST00000547530 CLTCL1P53675 1640 aa18.36■□□□□ 0.53
BRF1-211ENST00000547530 MADDQ8WXG6 1647 aa18.36■□□□□ 0.53
BRF1-211ENST00000547530 CCDC83Q8IWF9 413 aa18.36■□□□□ 0.53
BRF1-211ENST00000547530 NECAB1Q8N987 351 aa18.36■□□□□ 0.53
BRF1-211ENST00000547530 SYAP1Q96A49 352 aaPredicted RBP18.36■□□□□ 0.53
BRF1-211ENST00000547530 IFT57Q9NWB7 429 aa18.36■□□□□ 0.53
BRF1-211ENST00000547530 PNMA6EA0A0J9YXQ4 647 aa18.35■□□□□ 0.53
BRF1-211ENST00000547530 ZNF445P59923 1031 aa18.35■□□□□ 0.53
BRF1-211ENST00000547530 ANKRD44Q8N8A2 993 aa18.35■□□□□ 0.53
BRF1-211ENST00000547530 MSH6P52701 1360 aa18.35■□□□□ 0.53
BRF1-211ENST00000547530 GOLGA6L4A6NEF3 574 aa18.35■□□□□ 0.53
BRF1-211ENST00000547530 CWC22Q9HCG8 908 aaKnown RBP18.35■□□□□ 0.53
BRF1-211ENST00000547530 LRRFIP2Q9Y608 721 aaKnown RBP18.35■□□□□ 0.53
BRF1-211ENST00000547530 PPP4R3BQ5MIZ7 849 aa18.34■□□□□ 0.53
BRF1-211ENST00000547530 FANCAO15360 1455 aa18.34■□□□□ 0.53
BRF1-211ENST00000547530 TFIP11Q9UBB9 837 aaKnown RBP18.34■□□□□ 0.53
BRF1-211ENST00000547530 ADGRL1O94910 1474 aa18.34■□□□□ 0.53
BRF1-211ENST00000547530 MX1P20591 662 aa18.33■□□□□ 0.52
BRF1-211ENST00000547530 LRRCC1Q9C099 1032 aa18.33■□□□□ 0.52
BRF1-211ENST00000547530 SMC3Q9UQE7 1217 aa18.33■□□□□ 0.52
BRF1-211ENST00000547530 USHBP1Q8N6Y0 703 aa18.33■□□□□ 0.52
BRF1-211ENST00000547530 CSPP1Q1MSJ5 1256 aa18.32■□□□□ 0.52
BRF1-211ENST00000547530 SASS6Q6UVJ0 657 aa18.32■□□□□ 0.52
BRF1-211ENST00000547530 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.32■□□□□ 0.52
BRF1-211ENST00000547530 V9GYY5 206 aaPredicted RBP18.32■□□□□ 0.52
BRF1-211ENST00000547530 LMOD3Q0VAK6 560 aa18.31■□□□□ 0.52
BRF1-211ENST00000547530 LMOD2Q6P5Q4 547 aa18.31■□□□□ 0.52
BRF1-211ENST00000547530 MBD3O95983 291 aa18.31■□□□□ 0.52
BRF1-211ENST00000547530 AMPHP49418 695 aa18.31■□□□□ 0.52
BRF1-211ENST00000547530 ESF1Q9H501 851 aaKnown RBP18.31■□□□□ 0.52
BRF1-211ENST00000547530 NOLC1Q14978 699 aaKnown RBP eCLIP18.31■□□□□ 0.52
BRF1-211ENST00000547530 RPAP2Q8IXW5 612 aaPredicted RBP18.31■□□□□ 0.52
BRF1-211ENST00000547530 IL25Q9H293 177 aa18.31■□□□□ 0.52
BRF1-211ENST00000547530 IL16Q14005 1332 aa18.31■□□□□ 0.52
BRF1-211ENST00000547530 GNAI2P04899 355 aa18.3■□□□□ 0.52
BRF1-211ENST00000547530 DNM1Q05193 864 aaKnown RBP18.3■□□□□ 0.52
BRF1-211ENST00000547530 ESYT1Q9BSJ8 1104 aa18.3■□□□□ 0.52
BRF1-211ENST00000547530 CASTP20810 708 aaKnown RBP18.3■□□□□ 0.52
BRF1-211ENST00000547530 CHAF1AQ13111 956 aaPredicted RBP18.3■□□□□ 0.52
BRF1-211ENST00000547530 C16orf45Q96MC5 204 aaPredicted RBP18.3■□□□□ 0.52
BRF1-211ENST00000547530 KDM4AO75164 1064 aa18.29■□□□□ 0.52
BRF1-211ENST00000547530 SRCIN1Q9C0H9 1055 aa18.29■□□□□ 0.52
BRF1-211ENST00000547530 RBM33Q96EV2 1170 aaKnown RBP18.29■□□□□ 0.52
BRF1-211ENST00000547530 IL13P35225 146 aa18.28■□□□□ 0.52
BRF1-211ENST00000547530 NUDT16Q96DE0 195 aaKnown RBP18.28■□□□□ 0.52
BRF1-211ENST00000547530 PODXL2Q9NZ53 605 aa18.28■□□□□ 0.52
BRF1-211ENST00000547530 A0A087WWV3 80 aa18.28■□□□□ 0.52
BRF1-211ENST00000547530 CLASP1Q7Z460 1538 aa18.27■□□□□ 0.52
BRF1-211ENST00000547530 SYTL4Q96C24 671 aaPredicted RBP18.27■□□□□ 0.52
BRF1-211ENST00000547530 ABCC4O15439 1325 aa18.27■□□□□ 0.52
BRF1-211ENST00000547530 FGD1P98174 961 aa18.27■□□□□ 0.52
BRF1-211ENST00000547530 SIL1Q9H173 461 aa18.27■□□□□ 0.52
BRF1-211ENST00000547530 PREX2Q70Z35 1606 aa18.27■□□□□ 0.51
BRF1-211ENST00000547530 PRPF40BQ6NWY9 871 aaKnown RBP18.27■□□□□ 0.51
BRF1-211ENST00000547530 IQGAP3Q86VI3 1631 aa18.26■□□□□ 0.51
BRF1-211ENST00000547530 SRGAP3O43295 1099 aa18.26■□□□□ 0.51
BRF1-211ENST00000547530 U2AF2P26368 475 aaKnown RBP eCLIP18.26■□□□□ 0.511e-6■■■□□ 16.3
BRF1-211ENST00000547530 NAA30Q147X3 362 aaPredicted RBP18.26■□□□□ 0.51
BRF1-211ENST00000547530 UBTFL1P0CB47 393 aaPredicted RBP18.26■□□□□ 0.51
BRF1-211ENST00000547530 EIF4A2Q14240 407 aaKnown RBP18.26■□□□□ 0.51
BRF1-211ENST00000547530 ARHGAP45Q92619 1136 aa18.26■□□□□ 0.51
BRF1-211ENST00000547530 JAKMIP1Q96N16 626 aaKnown RBP18.26■□□□□ 0.51
BRF1-211ENST00000547530 IQSEC2Q5JU85 1478 aa18.25■□□□□ 0.51
BRF1-211ENST00000547530 DIAPH3Q9NSV4 1193 aa18.25■□□□□ 0.51
BRF1-211ENST00000547530 AIMP1Q12904 312 aaKnown RBP18.25■□□□□ 0.51
BRF1-211ENST00000547530 PHF14O94880 888 aa18.25■□□□□ 0.51
BRF1-211ENST00000547530 CHMLP26374 656 aa18.25■□□□□ 0.51
BRF1-211ENST00000547530 ZNF771Q7L3S4 317 aaPredicted RBP18.24■□□□□ 0.51
BRF1-211ENST00000547530 TRERF1Q96PN7 1200 aa18.24■□□□□ 0.51
BRF1-211ENST00000547530 PHAXQ9H814 394 aaKnown RBP18.24■□□□□ 0.51
BRF1-211ENST00000547530 KIF3AQ9Y496 699 aa18.24■□□□□ 0.51
BRF1-211ENST00000547530 TRIM5Q9C035 493 aa18.24■□□□□ 0.51
BRF1-211ENST00000547530 NPATQ14207 1427 aa18.24■□□□□ 0.51
BRF1-211ENST00000547530 NCOA3Q9Y6Q9 1424 aa18.24■□□□□ 0.51
BRF1-211ENST00000547530 LUZP1Q86V48 1076 aa18.24■□□□□ 0.51
BRF1-211ENST00000547530 AK2P54819 239 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms