RNA–Protein interactions for RNA: ENST00000547427.5

RBFOX1-209, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 4

Gene RBFOX1, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-209ENST00000547427 EZH2Q15910 746 aaKnown RBP32.63■■■□□ 2.81
RBFOX1-209ENST00000547427 ACSBG1Q96GR2 724 aa32.63■■■□□ 2.81
RBFOX1-209ENST00000547427 MTHFSP49914 203 aa32.62■■■□□ 2.81
RBFOX1-209ENST00000547427 SHANK3Q9BYB0 1731 aa32.62■■■□□ 2.81
RBFOX1-209ENST00000547427 CAMKK2Q96RR4 588 aa32.6■■■□□ 2.81
RBFOX1-209ENST00000547427 NCAPD2Q15021 1401 aa32.6■■■□□ 2.81
RBFOX1-209ENST00000547427 PTF1AQ7RTS3 328 aa32.59■■■□□ 2.81
RBFOX1-209ENST00000547427 NHSQ6T4R5 1651 aa32.59■■■□□ 2.81
RBFOX1-209ENST00000547427 PARD3Q8TEW0 1356 aa32.58■■■□□ 2.81
RBFOX1-209ENST00000547427 KCNQ2O43526 872 aa32.57■■■□□ 2.8
RBFOX1-209ENST00000547427 PCDH11XQ9BZA7 1347 aa32.56■■■□□ 2.8
RBFOX1-209ENST00000547427 PCDH11YQ9BZA8 1340 aa32.56■■■□□ 2.8
RBFOX1-209ENST00000547427 IGSF1Q8N6C5 1336 aa32.55■■■□□ 2.8
RBFOX1-209ENST00000547427 SPG7Q9UQ90 795 aa32.54■■■□□ 2.8
RBFOX1-209ENST00000547427 PKD1L3Q7Z443 1732 aa32.54■■■□□ 2.8
RBFOX1-209ENST00000547427 PLSCR1O15162 318 aa32.53■■■□□ 2.8
RBFOX1-209ENST00000547427 SYTL4Q96C24 671 aaPredicted RBP32.52■■■□□ 2.8
RBFOX1-209ENST00000547427 DOT1LQ8TEK3 1739 aa32.51■■■□□ 2.8
RBFOX1-209ENST00000547427 RGPD3A6NKT7 1758 aaPredicted RBP32.51■■■□□ 2.79
RBFOX1-209ENST00000547427 RGPD4Q7Z3J3 1758 aa32.51■■■□□ 2.79
RBFOX1-209ENST00000547427 RREB1Q92766 1687 aa32.51■■■□□ 2.79
RBFOX1-209ENST00000547427 BTAF1O14981 1849 aa32.5■■■□□ 2.79
RBFOX1-209ENST00000547427 IL13P35225 146 aa32.5■■■□□ 2.79
RBFOX1-209ENST00000547427 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP32.48■■■□□ 2.79
RBFOX1-209ENST00000547427 CYP27B1O15528 508 aa32.47■■■□□ 2.79
RBFOX1-209ENST00000547427 DIAPH1O60610 1272 aaKnown RBP32.47■■■□□ 2.79
RBFOX1-209ENST00000547427 DDX10Q13206 875 aaKnown RBP32.47■■■□□ 2.79
RBFOX1-209ENST00000547427 NUP188Q5SRE5 1749 aa32.46■■■□□ 2.79
RBFOX1-209ENST00000547427 PRIM1P49642 420 aaKnown RBP32.46■■■□□ 2.79
RBFOX1-209ENST00000547427 SULT6B1Q6IMI4 303 aa32.46■■■□□ 2.79
RBFOX1-209ENST00000547427 AEBP1Q8IUX7 1158 aa32.44■■■□□ 2.78
RBFOX1-209ENST00000547427 NBPF14Q5TI25 921 aa32.43■■■□□ 2.78
RBFOX1-209ENST00000547427 CFAP53Q96M91 514 aa32.43■■■□□ 2.78
RBFOX1-209ENST00000547427 PLEKHG2Q9H7P9 1386 aa32.43■■■□□ 2.78
RBFOX1-209ENST00000547427 PLEKHO1Q53GL0 409 aaPredicted RBP32.42■■■□□ 2.78
RBFOX1-209ENST00000547427 PSDA5PKW4 1024 aaPredicted RBP32.41■■■□□ 2.78
RBFOX1-209ENST00000547427 IFNL2Q8IZJ0 200 aa32.41■■■□□ 2.78
RBFOX1-209ENST00000547427 PPP2R1AP30153 589 aa32.4■■■□□ 2.78
RBFOX1-209ENST00000547427 TXNRD1Q16881 649 aa32.39■■■□□ 2.78
RBFOX1-209ENST00000547427 KDRP35968 1356 aa32.38■■■□□ 2.77
RBFOX1-209ENST00000547427 HMOX1P09601 288 aa32.38■■■□□ 2.77
RBFOX1-209ENST00000547427 R3HDM1Q15032 1099 aaKnown RBP32.38■■■□□ 2.77
RBFOX1-209ENST00000547427 AMOTQ4VCS5 1084 aa32.38■■■□□ 2.77
RBFOX1-209ENST00000547427 U2SURPO15042 1029 aaKnown RBP32.37■■■□□ 2.77
RBFOX1-209ENST00000547427 PHKG2P15735 406 aa32.37■■■□□ 2.77
RBFOX1-209ENST00000547427 COL3A1P02461 1466 aaPredicted RBP32.36■■■□□ 2.77
RBFOX1-209ENST00000547427 PROM2Q8N271 834 aa32.36■■■□□ 2.77
RBFOX1-209ENST00000547427 ITGB4P16144 1822 aa32.35■■■□□ 2.77
RBFOX1-209ENST00000547427 NKX1-1Q15270 411 aaPredicted RBP32.35■■■□□ 2.77
RBFOX1-209ENST00000547427 ZNF530Q6P9A1 599 aaPredicted RBP32.35■■■□□ 2.77
RBFOX1-209ENST00000547427 MPRIPQ6WCQ1 1025 aa32.34■■■□□ 2.77
RBFOX1-209ENST00000547427 TOGARAM1Q9Y4F4 1720 aa32.34■■■□□ 2.77
RBFOX1-209ENST00000547427 C1orf141Q5JVX7 400 aa32.31■■■□□ 2.76
RBFOX1-209ENST00000547427 NUDCQ9Y266 331 aa32.31■■■□□ 2.76
RBFOX1-209ENST00000547427 HSP90AB1P08238 724 aaKnown RBP32.3■■■□□ 2.76
RBFOX1-209ENST00000547427 RALBP1Q15311 655 aa32.26■■■□□ 2.75
RBFOX1-209ENST00000547427 DCAF5Q96JK2 942 aa32.26■■■□□ 2.75
RBFOX1-209ENST00000547427 STK32BQ9NY57 414 aa32.26■■■□□ 2.75
RBFOX1-209ENST00000547427 TMOD3Q9NYL9 352 aa32.26■■■□□ 2.75
RBFOX1-209ENST00000547427 LY75O60449 1722 aa32.26■■■□□ 2.75
RBFOX1-209ENST00000547427 SLC27A3Q5K4L6 730 aa32.25■■■□□ 2.75
RBFOX1-209ENST00000547427 ANO8Q9HCE9 1232 aaPredicted RBP32.25■■■□□ 2.75
RBFOX1-209ENST00000547427 PIGBQ92521 554 aa32.23■■■□□ 2.75
RBFOX1-209ENST00000547427 LRRC4BQ9NT99 713 aa32.22■■■□□ 2.75
RBFOX1-209ENST00000547427 SMARCC1Q92922 1105 aaPredicted RBP32.21■■■□□ 2.75
RBFOX1-209ENST00000547427 ERVV-2B6SEH9 535 aa32.2■■■□□ 2.75
RBFOX1-209ENST00000547427 U2AF1L5P0DN76 240 aaPredicted RBP32.2■■■□□ 2.75
RBFOX1-209ENST00000547427 U2AF1Q01081 240 aaKnown RBP eCLIP32.2■■■□□ 2.75
RBFOX1-209ENST00000547427 CCNL1Q9UK58 526 aaPredicted RBP32.2■■■□□ 2.75
RBFOX1-209ENST00000547427 PALLDQ8WX93 1383 aa32.19■■■□□ 2.74
RBFOX1-209ENST00000547427 ZNF316A6NFI3 1004 aaPredicted RBP32.19■■■□□ 2.74
RBFOX1-209ENST00000547427 KCNQ4P56696 695 aa32.19■■■□□ 2.74
RBFOX1-209ENST00000547427 SLC15A2Q16348 729 aa32.19■■■□□ 2.74
RBFOX1-209ENST00000547427 AKAP4Q5JQC9 854 aa32.19■■■□□ 2.74
RBFOX1-209ENST00000547427 CABP4P57796 275 aa32.17■■■□□ 2.74
RBFOX1-209ENST00000547427 MTHFSDQ2M296 383 aaKnown RBP32.17■■■□□ 2.74
RBFOX1-209ENST00000547427 KDM6AO15550 1401 aaPredicted RBP32.17■■■□□ 2.74
RBFOX1-209ENST00000547427 PAPPAQ13219 1627 aa32.15■■■□□ 2.74
RBFOX1-209ENST00000547427 SCN11AQ9UI33 1791 aa32.15■■■□□ 2.74
RBFOX1-209ENST00000547427 VIRMAQ69YN4 1812 aaKnown RBP32.14■■■□□ 2.74
RBFOX1-209ENST00000547427 PRKAR2BP31323 418 aa32.14■■■□□ 2.74
RBFOX1-209ENST00000547427 RSPH6AQ9H0K4 717 aa32.13■■■□□ 2.73
RBFOX1-209ENST00000547427 ASAP1Q9ULH1 1129 aa32.13■■■□□ 2.73
RBFOX1-209ENST00000547427 MYBBP1AQ9BQG0 1328 aaKnown RBP32.12■■■□□ 2.73
RBFOX1-209ENST00000547427 HMGB2P26583 209 aaKnown RBP32.11■■■□□ 2.73
RBFOX1-209ENST00000547427 GAS2L2Q8NHY3 880 aa32.11■■■□□ 2.73
RBFOX1-209ENST00000547427 FCHSD2O94868 740 aa32.1■■■□□ 2.73
RBFOX1-209ENST00000547427 C5P01031 1676 aa32.09■■■□□ 2.73
RBFOX1-209ENST00000547427 ZNF827Q17R98 1081 aa32.09■■■□□ 2.73
RBFOX1-209ENST00000547427 NFATC2IPQ8NCF5 419 aa32.09■■■□□ 2.73
RBFOX1-209ENST00000547427 LRP5O75197 1615 aa32.08■■■□□ 2.73
RBFOX1-209ENST00000547427 ATG3Q9NT62 314 aa32.08■■■□□ 2.73
RBFOX1-209ENST00000547427 TAF1LQ8IZX4 1826 aa32.07■■■□□ 2.73
RBFOX1-209ENST00000547427 RNMTO43148 476 aaKnown RBP32.07■■■□□ 2.72
RBFOX1-209ENST00000547427 AKT1S1Q96B36 256 aa32.07■■■□□ 2.72
RBFOX1-209ENST00000547427 LGR6Q9HBX8 967 aa32.07■■■□□ 2.72
RBFOX1-209ENST00000547427 TFCP2L1Q9NZI6 479 aa32.07■■■□□ 2.72
RBFOX1-209ENST00000547427 LOC102724428A0A0B4J2F2 783 aa32.06■■■□□ 2.72
RBFOX1-209ENST00000547427 NEFMP07197 916 aa32.06■■■□□ 2.72
RBFOX1-209ENST00000547427 SIK1P57059 783 aa32.06■■■□□ 2.72
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms