RNA–Protein interactions for RNA: ENST00000547259.1

HDAC7-226, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-226ENST00000547259 ARXQ96QS3 562 aa16.46■□□□□ 0.23
HDAC7-226ENST00000547259 CARD14Q9BXL6 1004 aa16.46■□□□□ 0.23
HDAC7-226ENST00000547259 FHDC1Q9C0D6 1143 aaPredicted RBP16.46■□□□□ 0.23
HDAC7-226ENST00000547259 KNSTRNQ9Y448 316 aa16.46■□□□□ 0.23
HDAC7-226ENST00000547259 UTRNP46939 3433 aa16.45■□□□□ 0.22
HDAC7-226ENST00000547259 AMPHP49418 695 aa16.45■□□□□ 0.22
HDAC7-226ENST00000547259 DDX54Q8TDD1 881 aaKnown RBP16.45■□□□□ 0.22
HDAC7-226ENST00000547259 MAP3K5Q99683 1374 aa16.44■□□□□ 0.22
HDAC7-226ENST00000547259 POLD1P28340 1107 aa16.44■□□□□ 0.22
HDAC7-226ENST00000547259 SGIP1Q9BQI5 828 aa16.44■□□□□ 0.22
HDAC7-226ENST00000547259 CGNL1Q0VF96 1302 aa16.44■□□□□ 0.22
HDAC7-226ENST00000547259 QSER1Q2KHR3 1735 aa16.43■□□□□ 0.22
HDAC7-226ENST00000547259 LTV1Q96GA3 475 aaPredicted RBP16.43■□□□□ 0.22
HDAC7-226ENST00000547259 PAPPAQ13219 1627 aa16.43■□□□□ 0.22
HDAC7-226ENST00000547259 ZCRB1Q8TBF4 217 aaKnown RBP16.42■□□□□ 0.22
HDAC7-226ENST00000547259 NSD2O96028 1365 aa16.41■□□□□ 0.22
HDAC7-226ENST00000547259 PER1O15534 1290 aaPredicted RBP16.41■□□□□ 0.22
HDAC7-226ENST00000547259 HOXC9P31274 260 aa16.41■□□□□ 0.22
HDAC7-226ENST00000547259 SYTL4Q96C24 671 aaPredicted RBP16.41■□□□□ 0.22
HDAC7-226ENST00000547259 MAP3K19Q56UN5 1328 aa16.41■□□□□ 0.22
HDAC7-226ENST00000547259 RTL1A6NKG5 1358 aa16.4■□□□□ 0.22
HDAC7-226ENST00000547259 SMG6Q86US8 1419 aaKnown RBP16.4■□□□□ 0.22
HDAC7-226ENST00000547259 AKT1S1Q96B36 256 aa16.4■□□□□ 0.22
HDAC7-226ENST00000547259 LRRC4BQ9NT99 713 aa16.4■□□□□ 0.22
HDAC7-226ENST00000547259 TFCP2L1Q9NZI6 479 aa16.4■□□□□ 0.22
HDAC7-226ENST00000547259 PRIM1P49642 420 aaKnown RBP16.39■□□□□ 0.21
HDAC7-226ENST00000547259 CNGB1Q14028 1251 aaPredicted RBP16.39■□□□□ 0.21
HDAC7-226ENST00000547259 ZNF827Q17R98 1081 aa16.38■□□□□ 0.21
HDAC7-226ENST00000547259 ZNF784Q8NCA9 323 aaPredicted RBP16.38■□□□□ 0.21
HDAC7-226ENST00000547259 RAPGEF4Q8WZA2 1011 aa16.38■□□□□ 0.21
HDAC7-226ENST00000547259 GGNBP2Q9H3C7 697 aa16.38■□□□□ 0.21
HDAC7-226ENST00000547259 NPC1L1Q9UHC9 1359 aa16.38■□□□□ 0.21
HDAC7-226ENST00000547259 GPR162Q16538 588 aa16.37■□□□□ 0.21
HDAC7-226ENST00000547259 AMER1Q5JTC6 1135 aaPredicted RBP16.37■□□□□ 0.21
HDAC7-226ENST00000547259 CC2D1BQ5T0F9 858 aaKnown RBP16.37■□□□□ 0.21
HDAC7-226ENST00000547259 KIF24Q5T7B8 1368 aa16.37■□□□□ 0.21
HDAC7-226ENST00000547259 LY75O60449 1722 aa16.36■□□□□ 0.21
HDAC7-226ENST00000547259 FYB1O15117 783 aa16.36■□□□□ 0.21
HDAC7-226ENST00000547259 DIEXFQ68CQ4 756 aaKnown RBP16.36■□□□□ 0.21
HDAC7-226ENST00000547259 TATP17735 454 aaPredicted RBP16.35■□□□□ 0.21
HDAC7-226ENST00000547259 COL24A1Q17RW2 1714 aa16.35■□□□□ 0.21
HDAC7-226ENST00000547259 DOT1LQ8TEK3 1739 aa16.34■□□□□ 0.21
HDAC7-226ENST00000547259 RGPD2P0DJD1 1756 aa16.34■□□□□ 0.21
HDAC7-226ENST00000547259 FLAD1Q8NFF5 587 aa16.34■□□□□ 0.21
HDAC7-226ENST00000547259 CCNL1Q9UK58 526 aaPredicted RBP16.34■□□□□ 0.21
HDAC7-226ENST00000547259 PNPLA7Q6ZV29 1317 aa16.34■□□□□ 0.21
HDAC7-226ENST00000547259 MAP2P11137 1827 aaKnown RBP16.33■□□□□ 0.2
HDAC7-226ENST00000547259 INSRP06213 1382 aa16.32■□□□□ 0.2
HDAC7-226ENST00000547259 NBPF6Q5VWK0 638 aa16.32■□□□□ 0.2
HDAC7-226ENST00000547259 MORC1Q86VD1 984 aa16.32■□□□□ 0.2
HDAC7-226ENST00000547259 KLHL34Q8N239 644 aa16.32■□□□□ 0.2
HDAC7-226ENST00000547259 NBPF4Q96M43 638 aa16.32■□□□□ 0.2
HDAC7-226ENST00000547259 PCDH11XQ9BZA7 1347 aa16.32■□□□□ 0.2
HDAC7-226ENST00000547259 PCDH11YQ9BZA8 1340 aa16.32■□□□□ 0.2
HDAC7-226ENST00000547259 ANP32CO43423 234 aa16.31■□□□□ 0.2
HDAC7-226ENST00000547259 GRIN3BO60391 1043 aa16.31■□□□□ 0.2
HDAC7-226ENST00000547259 RRS1Q15050 365 aaKnown RBP16.31■□□□□ 0.2
HDAC7-226ENST00000547259 SHANK3Q9BYB0 1731 aa16.31■□□□□ 0.2
HDAC7-226ENST00000547259 GOLGB1Q14789 3259 aaKnown RBP16.3■□□□□ 0.2
HDAC7-226ENST00000547259 MEGF6O75095 1541 aa16.3■□□□□ 0.2
HDAC7-226ENST00000547259 FLT4P35916 1363 aa16.3■□□□□ 0.2
HDAC7-226ENST00000547259 MSH5O43196 834 aa16.3■□□□□ 0.2
HDAC7-226ENST00000547259 FBLN1P23142 703 aa16.3■□□□□ 0.2
HDAC7-226ENST00000547259 TUBGCP6Q96RT7 1819 aa16.29■□□□□ 0.2
HDAC7-226ENST00000547259 TNNT2P45379 298 aaPredicted RBP16.29■□□□□ 0.2
HDAC7-226ENST00000547259 SMARCC1Q92922 1105 aaPredicted RBP16.29■□□□□ 0.2
HDAC7-226ENST00000547259 RALBP1Q15311 655 aa16.28■□□□□ 0.2
HDAC7-226ENST00000547259 KCNQ4P56696 695 aa16.27■□□□□ 0.2
HDAC7-226ENST00000547259 HSP90AB2PQ58FF8 381 aa16.27■□□□□ 0.2
HDAC7-226ENST00000547259 PELP1Q8IZL8 1130 aaKnown RBP16.27■□□□□ 0.2
HDAC7-226ENST00000547259 PRKRIP1Q9H875 184 aaPredicted RBP16.27■□□□□ 0.2
HDAC7-226ENST00000547259 C1QTNF8P60827 252 aa16.26■□□□□ 0.19
HDAC7-226ENST00000547259 MPRIPQ6WCQ1 1025 aa16.25■□□□□ 0.19
HDAC7-226ENST00000547259 COL23A1Q86Y22 540 aaPredicted RBP16.25■□□□□ 0.19
HDAC7-226ENST00000547259 USHBP1Q8N6Y0 703 aa16.25■□□□□ 0.19
HDAC7-226ENST00000547259 SPG7Q9UQ90 795 aa16.25■□□□□ 0.19
HDAC7-226ENST00000547259 C5P01031 1676 aa16.24■□□□□ 0.19
HDAC7-226ENST00000547259 MYBBP1AQ9BQG0 1328 aaKnown RBP16.24■□□□□ 0.19
HDAC7-226ENST00000547259 CD2APQ9Y5K6 639 aa16.24■□□□□ 0.19
HDAC7-226ENST00000547259 PALLDQ8WX93 1383 aa16.24■□□□□ 0.19
HDAC7-226ENST00000547259 TAF1LQ8IZX4 1826 aa16.24■□□□□ 0.19
HDAC7-226ENST00000547259 GIGYF1O75420 1035 aaPredicted RBP16.23■□□□□ 0.19
HDAC7-226ENST00000547259 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.23■□□□□ 0.19
HDAC7-226ENST00000547259 ITGB4P16144 1822 aa16.22■□□□□ 0.19
HDAC7-226ENST00000547259 PPP2R1AP30153 589 aa16.22■□□□□ 0.19
HDAC7-226ENST00000547259 AK7Q96M32 723 aa16.22■□□□□ 0.19
HDAC7-226ENST00000547259 SENP3-EIF4A1A0A087X0R7 540 aa16.21■□□□□ 0.19
HDAC7-226ENST00000547259 CYP27B1O15528 508 aa16.21■□□□□ 0.19
HDAC7-226ENST00000547259 NKX1-1Q15270 411 aaPredicted RBP16.21■□□□□ 0.19
HDAC7-226ENST00000547259 NLGN2Q8NFZ4 835 aa16.21■□□□□ 0.19
HDAC7-226ENST00000547259 PPM1GO15355 546 aaPredicted RBP16.2■□□□□ 0.18
HDAC7-226ENST00000547259 EMILIN1Q9Y6C2 1016 aa16.2■□□□□ 0.18
HDAC7-226ENST00000547259 PKD1L3Q7Z443 1732 aa16.19■□□□□ 0.18
HDAC7-226ENST00000547259 PLEKHG2Q9H7P9 1386 aa16.19■□□□□ 0.18
HDAC7-226ENST00000547259 POLKQ9UBT6 870 aa16.19■□□□□ 0.18
HDAC7-226ENST00000547259 SSFA2P28290 1259 aa16.18■□□□□ 0.18
HDAC7-226ENST00000547259 NCAPD2Q15021 1401 aa16.18■□□□□ 0.18
HDAC7-226ENST00000547259 C4BP0C0L5 1744 aa16.17■□□□□ 0.18
HDAC7-226ENST00000547259 MTHFSP49914 203 aa16.17■□□□□ 0.18
HDAC7-226ENST00000547259 MSL1Q68DK7 614 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms