RNA–Protein interactions for RNA: ENST00000547228.1

PFDN5-205, Transcript of prefoldin subunit 5, humanhuman

TSL 5

Gene PFDN5, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-205ENST00000547228 SYTL4Q96C24 671 aaPredicted RBP8.35□□□□□ -1.07
PFDN5-205ENST00000547228 KLRG1Q96E93 195 aa8.35□□□□□ -1.07
PFDN5-205ENST00000547228 PLSCR2Q9NRY7 297 aa8.35□□□□□ -1.07
PFDN5-205ENST00000547228 PHRF1Q9P1Y6 1649 aaKnown RBP8.34□□□□□ -1.07
PFDN5-205ENST00000547228 SOX12O15370 315 aa8.34□□□□□ -1.07
PFDN5-205ENST00000547228 C16orf71Q8IYS4 520 aaPredicted RBP8.34□□□□□ -1.07
PFDN5-205ENST00000547228 JMYQ8N9B5 988 aa8.34□□□□□ -1.07
PFDN5-205ENST00000547228 DDX54Q8TDD1 881 aaKnown RBP8.34□□□□□ -1.07
PFDN5-205ENST00000547228 PPIP5K1Q6PFW1 1433 aa8.34□□□□□ -1.07
PFDN5-205ENST00000547228 ADGRB1O14514 1584 aa8.34□□□□□ -1.07
PFDN5-205ENST00000547228 COL23A1Q86Y22 540 aaPredicted RBP8.33□□□□□ -1.08
PFDN5-205ENST00000547228 CABP2Q9NPB3 220 aa8.33□□□□□ -1.08
PFDN5-205ENST00000547228 ADCY9O60503 1353 aa8.33□□□□□ -1.08
PFDN5-205ENST00000547228 LRRC37A3O60309 1634 aa8.32□□□□□ -1.08
PFDN5-205ENST00000547228 TNS2Q63HR2 1409 aa8.32□□□□□ -1.08
PFDN5-205ENST00000547228 PRIM1P49642 420 aaKnown RBP8.32□□□□□ -1.08
PFDN5-205ENST00000547228 KCNQ4P56696 695 aa8.32□□□□□ -1.08
PFDN5-205ENST00000547228 CCNL1Q9UK58 526 aaPredicted RBP8.32□□□□□ -1.08
PFDN5-205ENST00000547228 CPSF1Q10570 1443 aaKnown RBP8.31□□□□□ -1.08
PFDN5-205ENST00000547228 FSTL1Q12841 308 aa8.31□□□□□ -1.08
PFDN5-205ENST00000547228 MSL1Q68DK7 614 aa8.31□□□□□ -1.08
PFDN5-205ENST00000547228 RBM46Q8TBY0 533 aaKnown RBP8.31□□□□□ -1.08
PFDN5-205ENST00000547228 WWC3Q9ULE0 1092 aa8.31□□□□□ -1.08
PFDN5-205ENST00000547228 PCDH10Q9P2E7 1040 aa8.3□□□□□ -1.08
PFDN5-205ENST00000547228 TTC21BQ7Z4L5 1316 aa8.29□□□□□ -1.08
PFDN5-205ENST00000547228 IGSF1Q8N6C5 1336 aa8.29□□□□□ -1.08
PFDN5-205ENST00000547228 TTC21AQ8NDW8 1320 aa8.29□□□□□ -1.08
PFDN5-205ENST00000547228 SLC34A2O95436 690 aa8.29□□□□□ -1.08
PFDN5-205ENST00000547228 ATXN8OSP0DMR3 200 aa8.29□□□□□ -1.08
PFDN5-205ENST00000547228 SPRYD3Q8NCJ5 442 aa8.29□□□□□ -1.08
PFDN5-205ENST00000547228 ITSN1Q15811 1721 aa8.29□□□□□ -1.08
PFDN5-205ENST00000547228 ERBB3P21860 1342 aa8.29□□□□□ -1.08
PFDN5-205ENST00000547228 CENPJQ9HC77 1338 aaPredicted RBP8.29□□□□□ -1.08
PFDN5-205ENST00000547228 USP47Q96K76 1375 aa8.28□□□□□ -1.08
PFDN5-205ENST00000547228 ANKRD24Q8TF21 1146 aa8.28□□□□□ -1.08
PFDN5-205ENST00000547228 SBF2Q86WG5 1849 aa8.28□□□□□ -1.08
PFDN5-205ENST00000547228 SLIT3O75094 1523 aa8.28□□□□□ -1.08
PFDN5-205ENST00000547228 EVC2Q86UK5 1308 aa8.28□□□□□ -1.08
PFDN5-205ENST00000547228 ANKRD36BQ8N2N9 1353 aa8.27□□□□□ -1.09
PFDN5-205ENST00000547228 CDK11BP21127 795 aaKnown RBP8.27□□□□□ -1.09
PFDN5-205ENST00000547228 ARHGAP27Q6ZUM4 889 aa8.27□□□□□ -1.09
PFDN5-205ENST00000547228 NMRK2Q9NPI5 230 aa8.27□□□□□ -1.09
PFDN5-205ENST00000547228 KDM2BQ8NHM5 1336 aa8.27□□□□□ -1.09
PFDN5-205ENST00000547228 PAPPAQ13219 1627 aa8.26□□□□□ -1.09
PFDN5-205ENST00000547228 HMGB1P09429 215 aaKnown RBP8.26□□□□□ -1.09
PFDN5-205ENST00000547228 ZCRB1Q8TBF4 217 aaKnown RBP8.26□□□□□ -1.09
PFDN5-205ENST00000547228 GOLGB1Q14789 3259 aaKnown RBP8.25□□□□□ -1.09
PFDN5-205ENST00000547228 ABCC6O95255 1503 aa8.25□□□□□ -1.09
PFDN5-205ENST00000547228 TOPAZ1Q8N9V7 1692 aa8.25□□□□□ -1.09
PFDN5-205ENST00000547228 TGFB2P61812 414 aa8.25□□□□□ -1.09
PFDN5-205ENST00000547228 HTRA3P83110 453 aa8.25□□□□□ -1.09
PFDN5-205ENST00000547228 SMC1BQ8NDV3 1235 aa8.25□□□□□ -1.09
PFDN5-205ENST00000547228 AK7Q96M32 723 aa8.25□□□□□ -1.09
PFDN5-205ENST00000547228 BCS1LQ9Y276 419 aa8.25□□□□□ -1.09
PFDN5-205ENST00000547228 NHSQ6T4R5 1651 aa8.24□□□□□ -1.09
PFDN5-205ENST00000547228 NBPF1Q3BBV0 1214 aa8.24□□□□□ -1.09
PFDN5-205ENST00000547228 TRPM1Q7Z4N2 1603 aa8.23□□□□□ -1.09
PFDN5-205ENST00000547228 HSPA1AP0DMV8 641 aaKnown RBP8.23□□□□□ -1.09
PFDN5-205ENST00000547228 HSPA1BP0DMV9 641 aaKnown RBP8.23□□□□□ -1.09
PFDN5-205ENST00000547228 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.23□□□□□ -1.09
PFDN5-205ENST00000547228 SMARCC1Q92922 1105 aaPredicted RBP8.23□□□□□ -1.09
PFDN5-205ENST00000547228 KTN1Q86UP2 1357 aaKnown RBP8.22□□□□□ -1.09
PFDN5-205ENST00000547228 AKAP12Q02952 1782 aa8.22□□□□□ -1.09
PFDN5-205ENST00000547228 NSD3Q9BZ95 1437 aa8.22□□□□□ -1.09
PFDN5-205ENST00000547228 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.22□□□□□ -1.09
PFDN5-205ENST00000547228 FCHSD2O94868 740 aa8.22□□□□□ -1.09
PFDN5-205ENST00000547228 PHF14O94880 888 aa8.22□□□□□ -1.09
PFDN5-205ENST00000547228 C9orf131Q5VYM1 1079 aa8.22□□□□□ -1.09
PFDN5-205ENST00000547228 IP6K1Q92551 441 aa8.22□□□□□ -1.09
PFDN5-205ENST00000547228 LTV1Q96GA3 475 aaPredicted RBP8.22□□□□□ -1.09
PFDN5-205ENST00000547228 RRAGCQ9HB90 399 aa8.22□□□□□ -1.09
PFDN5-205ENST00000547228 ARHGEF28Q8N1W1 1705 aaKnown RBP8.21□□□□□ -1.09
PFDN5-205ENST00000547228 A0A0G2JLW4 131 aa8.21□□□□□ -1.1
PFDN5-205ENST00000547228 SSFA2P28290 1259 aa8.21□□□□□ -1.1
PFDN5-205ENST00000547228 SP7Q8TDD2 431 aaPredicted RBP8.21□□□□□ -1.1
PFDN5-205ENST00000547228 CGNL1Q0VF96 1302 aa8.21□□□□□ -1.1
PFDN5-205ENST00000547228 COL18A1P39060 1754 aa8.2□□□□□ -1.1
PFDN5-205ENST00000547228 MPRIPQ6WCQ1 1025 aa8.2□□□□□ -1.1
PFDN5-205ENST00000547228 HDGFL2Q7Z4V5 671 aaPredicted RBP8.2□□□□□ -1.1
PFDN5-205ENST00000547228 NLGN1Q8N2Q7 840 aa8.2□□□□□ -1.1
PFDN5-205ENST00000547228 RAPGEF4Q8WZA2 1011 aa8.2□□□□□ -1.1
PFDN5-205ENST00000547228 USP31Q70CQ4 1352 aa8.2□□□□□ -1.1
PFDN5-205ENST00000547228 PLEKHG2Q9H7P9 1386 aa8.2□□□□□ -1.1
PFDN5-205ENST00000547228 MMP10P09238 476 aa8.19□□□□□ -1.1
PFDN5-205ENST00000547228 VEGFAP15692 232 aaPredicted RBP8.19□□□□□ -1.1
PFDN5-205ENST00000547228 NME9Q86XW9 330 aa8.19□□□□□ -1.1
PFDN5-205ENST00000547228 CCDC87Q9NVE4 849 aa8.19□□□□□ -1.1
PFDN5-205ENST00000547228 COL24A1Q17RW2 1714 aa8.19□□□□□ -1.1
PFDN5-205ENST00000547228 NSD2O96028 1365 aa8.19□□□□□ -1.1
PFDN5-205ENST00000547228 PALLDQ8WX93 1383 aa8.19□□□□□ -1.1
PFDN5-205ENST00000547228 BTAF1O14981 1849 aa8.18□□□□□ -1.1
PFDN5-205ENST00000547228 HSP90B1P14625 803 aaKnown RBP8.18□□□□□ -1.1
PFDN5-205ENST00000547228 AMPHP49418 695 aa8.18□□□□□ -1.1
PFDN5-205ENST00000547228 VASPP50552 380 aaPredicted RBP8.18□□□□□ -1.1
PFDN5-205ENST00000547228 TMF1P82094 1093 aa8.18□□□□□ -1.1
PFDN5-205ENST00000547228 RNF181Q9P0P0 153 aa8.18□□□□□ -1.1
PFDN5-205ENST00000547228 PIM2Q9P1W9 311 aa8.18□□□□□ -1.1
PFDN5-205ENST00000547228 QSER1Q2KHR3 1735 aa8.17□□□□□ -1.1
PFDN5-205ENST00000547228 IGSF3O75054 1194 aa8.17□□□□□ -1.1
PFDN5-205ENST00000547228 DPEP1P16444 411 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 149.4 ms