RNA–Protein interactions for RNA: ENST00000546997.1

BRF1-208, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 1,999 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-208ENST00000546997 NCAPD2Q15021 1401 aa21.29■■□□□ 1
BRF1-208ENST00000546997 NEFMP07197 916 aa21.28■■□□□ 1
BRF1-208ENST00000546997 GOLGA2Q08379 1002 aa21.27■■□□□ 1
BRF1-208ENST00000546997 COL5A2P05997 1499 aaPredicted RBP21.27■■□□□ 1
BRF1-208ENST00000546997 FAM83GA6ND36 823 aa21.27■□□□□ 0.99
BRF1-208ENST00000546997 RIPK4P57078 832 aa21.27■□□□□ 0.99
BRF1-208ENST00000546997 NFE2L2Q16236 605 aa21.27■□□□□ 0.99
BRF1-208ENST00000546997 CCDC27Q2M243 656 aa21.27■□□□□ 0.99
BRF1-208ENST00000546997 TRIM35Q9UPQ4 493 aa21.27■□□□□ 0.99
BRF1-208ENST00000546997 COL14A1Q05707 1796 aaKnown RBP21.26■□□□□ 0.99
BRF1-208ENST00000546997 DUSP27Q5VZP5 1158 aa21.25■□□□□ 0.99
BRF1-208ENST00000546997 SPINK5Q9NQ38 1064 aaPredicted RBP21.25■□□□□ 0.99
BRF1-208ENST00000546997 FOXD4L1Q9NU39 408 aa21.25■□□□□ 0.99
BRF1-208ENST00000546997 TPRNQ4KMQ1 711 aa21.24■□□□□ 0.99
BRF1-208ENST00000546997 SLFN5Q08AF3 891 aa21.23■□□□□ 0.99
BRF1-208ENST00000546997 PLCH1Q4KWH8 1693 aa21.23■□□□□ 0.99
BRF1-208ENST00000546997 CSB-PGBD3P0DP91 1061 aa21.23■□□□□ 0.99
BRF1-208ENST00000546997 HSPA1LP34931 641 aa21.23■□□□□ 0.99
BRF1-208ENST00000546997 NLRP2Q9NX02 1062 aa21.23■□□□□ 0.99
BRF1-208ENST00000546997 TRMT2AQ8IZ69 625 aaKnown RBP21.22■□□□□ 0.99
BRF1-208ENST00000546997 JCADQ9P266 1359 aa21.22■□□□□ 0.99
BRF1-208ENST00000546997 MTHFSDQ2M296 383 aaKnown RBP21.21■□□□□ 0.99
BRF1-208ENST00000546997 WDR17Q8IZU2 1322 aa21.2■□□□□ 0.98
BRF1-208ENST00000546997 NUTM2BA6NNL0 878 aaPredicted RBP21.2■□□□□ 0.98
BRF1-208ENST00000546997 NUTM2EB1AL46 878 aaPredicted RBP21.2■□□□□ 0.98
BRF1-208ENST00000546997 ADAMTS2O95450 1211 aa21.2■□□□□ 0.98
BRF1-208ENST00000546997 NUTM2AQ8IVF1 878 aaPredicted RBP21.2■□□□□ 0.98
BRF1-208ENST00000546997 BACH2Q9BYV9 841 aa21.19■□□□□ 0.98
BRF1-208ENST00000546997 ANO8Q9HCE9 1232 aaPredicted RBP21.19■□□□□ 0.98
BRF1-208ENST00000546997 WDR63Q8IWG1 891 aa21.19■□□□□ 0.98
BRF1-208ENST00000546997 THUMPD2Q9BTF0 503 aaKnown RBP21.19■□□□□ 0.98
BRF1-208ENST00000546997 BTG4Q9NY30 223 aa21.19■□□□□ 0.98
BRF1-208ENST00000546997 DDRGK1Q96HY6 314 aa21.18■□□□□ 0.98
BRF1-208ENST00000546997 STRN4Q9NRL3 753 aa21.18■□□□□ 0.98
BRF1-208ENST00000546997 PDE4AP27815 886 aa21.17■□□□□ 0.98
BRF1-208ENST00000546997 ARXQ96QS3 562 aa21.17■□□□□ 0.98
BRF1-208ENST00000546997 MEGF6O75095 1541 aa21.17■□□□□ 0.98
BRF1-208ENST00000546997 NRAPQ86VF7 1730 aa21.17■□□□□ 0.98
BRF1-208ENST00000546997 VIRMAQ69YN4 1812 aaKnown RBP21.17■□□□□ 0.98
BRF1-208ENST00000546997 E9PSI1 815 aa21.16■□□□□ 0.98
BRF1-208ENST00000546997 DCTN1Q14203 1278 aa21.16■□□□□ 0.98
BRF1-208ENST00000546997 LARP1Q6PKG0 1096 aaKnown RBP21.16■□□□□ 0.98
BRF1-208ENST00000546997 TOM1L2Q6ZVM7 507 aa21.16■□□□□ 0.98
BRF1-208ENST00000546997 GAS2L2Q8NHY3 880 aa21.16■□□□□ 0.98
BRF1-208ENST00000546997 EXOC6Q8TAG9 804 aa21.16■□□□□ 0.98
BRF1-208ENST00000546997 PLIN1O60240 522 aa21.14■□□□□ 0.97
BRF1-208ENST00000546997 EVA1CP58658 441 aa21.14■□□□□ 0.97
BRF1-208ENST00000546997 LRP6O75581 1613 aa21.13■□□□□ 0.97
BRF1-208ENST00000546997 LMOD3Q0VAK6 560 aa21.13■□□□□ 0.97
BRF1-208ENST00000546997 MCM10Q7L590 875 aa21.13■□□□□ 0.97
BRF1-208ENST00000546997 PKD1L3Q7Z443 1732 aa21.13■□□□□ 0.97
BRF1-208ENST00000546997 NWD2Q9ULI1 1742 aa21.13■□□□□ 0.97
BRF1-208ENST00000546997 PARP4Q9UKK3 1724 aaKnown RBP21.12■□□□□ 0.97
BRF1-208ENST00000546997 CRB1P82279 1406 aa21.12■□□□□ 0.97
BRF1-208ENST00000546997 LRRC37A3O60309 1634 aa21.12■□□□□ 0.97
BRF1-208ENST00000546997 RAPGEF4Q8WZA2 1011 aa21.12■□□□□ 0.97
BRF1-208ENST00000546997 SPATA31A6Q5VVP1 1343 aa21.11■□□□□ 0.97
BRF1-208ENST00000546997 CARD10Q9BWT7 1032 aa21.11■□□□□ 0.97
BRF1-208ENST00000546997 IL16Q14005 1332 aa21.11■□□□□ 0.97
BRF1-208ENST00000546997 MAP3K5Q99683 1374 aa21.11■□□□□ 0.97
BRF1-208ENST00000546997 IL27Q8NEV9 243 aa21.1■□□□□ 0.97
BRF1-208ENST00000546997 TSR2Q969E8 191 aaKnown RBP21.1■□□□□ 0.97
BRF1-208ENST00000546997 SLIT2O94813 1529 aa21.09■□□□□ 0.97
BRF1-208ENST00000546997 GNAT3A8MTJ3 354 aa21.09■□□□□ 0.97
BRF1-208ENST00000546997 AMOTQ4VCS5 1084 aa21.09■□□□□ 0.97
BRF1-208ENST00000546997 PLEKHO1Q53GL0 409 aaPredicted RBP21.09■□□□□ 0.97
BRF1-208ENST00000546997 ZNF530Q6P9A1 599 aaPredicted RBP21.08■□□□□ 0.97
BRF1-208ENST00000546997 TATP17735 454 aaPredicted RBP21.08■□□□□ 0.96
BRF1-208ENST00000546997 MYH16Q9H6N6 1097 aa21.08■□□□□ 0.96
BRF1-208ENST00000546997 OVOS2A0A0G2JMS6 1433 aa21.08■□□□□ 0.96
BRF1-208ENST00000546997 SHANK3Q9BYB0 1731 aa21.08■□□□□ 0.96
BRF1-208ENST00000546997 WNK3Q9BYP7 1800 aa21.08■□□□□ 0.96
BRF1-208ENST00000546997 RTF1Q92541 710 aaKnown RBP21.07■□□□□ 0.96
BRF1-208ENST00000546997 FBXO41Q8TF61 875 aa21.06■□□□□ 0.96
BRF1-208ENST00000546997 C8orf37Q96NL8 207 aa21.06■□□□□ 0.96
BRF1-208ENST00000546997 LAS1LQ9Y4W2 734 aaKnown RBP21.06■□□□□ 0.96
BRF1-208ENST00000546997 CALD1Q05682 793 aaKnown RBP21.05■□□□□ 0.96
BRF1-208ENST00000546997 IL17REQ8NFR9 667 aa21.05■□□□□ 0.96
BRF1-208ENST00000546997 PLEKHG2Q9H7P9 1386 aa21.05■□□□□ 0.96
BRF1-208ENST00000546997 TULP1O00294 542 aaPredicted RBP21.05■□□□□ 0.96
BRF1-208ENST00000546997 HTATSF1O43719 755 aaKnown RBP21.05■□□□□ 0.96
BRF1-208ENST00000546997 ZNF853P0CG23 659 aa21.05■□□□□ 0.96
BRF1-208ENST00000546997 CRBNQ96SW2 442 aa21.05■□□□□ 0.96
BRF1-208ENST00000546997 IFT57Q9NWB7 429 aa21.05■□□□□ 0.96
BRF1-208ENST00000546997 ADAMTS7Q9UKP4 1686 aa21.04■□□□□ 0.96
BRF1-208ENST00000546997 SCN11AQ9UI33 1791 aa21.03■□□□□ 0.96
BRF1-208ENST00000546997 AKAP4Q5JQC9 854 aa21.03■□□□□ 0.96
BRF1-208ENST00000546997 C20orf194Q5TEA3 1177 aa21.03■□□□□ 0.96
BRF1-208ENST00000546997 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.03■□□□□ 0.96
BRF1-208ENST00000546997 CFAP44Q96MT7 982 aa21.03■□□□□ 0.96
BRF1-208ENST00000546997 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.03■□□□□ 0.96
BRF1-208ENST00000546997 IL2RBP14784 551 aa21.03■□□□□ 0.96
BRF1-208ENST00000546997 GSE1Q14687 1217 aa21.03■□□□□ 0.96
BRF1-208ENST00000546997 MBIPQ9NS73 344 aa21.03■□□□□ 0.96
BRF1-208ENST00000546997 CEMIPQ8WUJ3 1361 aa21.02■□□□□ 0.96
BRF1-208ENST00000546997 GNAI1P63096 354 aa21.02■□□□□ 0.96
BRF1-208ENST00000546997 C1orf141Q5JVX7 400 aa21.02■□□□□ 0.96
BRF1-208ENST00000546997 SPG7Q9UQ90 795 aa21.02■□□□□ 0.96
BRF1-208ENST00000546997 BCL9LQ86UU0 1499 aa21.02■□□□□ 0.95
BRF1-208ENST00000546997 MPRIPQ6WCQ1 1025 aa21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms