RNA–Protein interactions for RNA: ENST00000546947.5

CCDC38-205, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 4

Gene CCDC38, Length 559 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-205ENST00000546947 NCAPD2Q15021 1401 aa20.2■□□□□ 0.82
CCDC38-205ENST00000546947 TATP17735 454 aaPredicted RBP20.2■□□□□ 0.82
CCDC38-205ENST00000546947 AMER1Q5JTC6 1135 aaPredicted RBP20.2■□□□□ 0.82
CCDC38-205ENST00000546947 ZCRB1Q8TBF4 217 aaKnown RBP20.2■□□□□ 0.82
CCDC38-205ENST00000546947 KAT6BQ8WYB5 2073 aa20.2■□□□□ 0.82
CCDC38-205ENST00000546947 PTF1AQ7RTS3 328 aa20.19■□□□□ 0.82
CCDC38-205ENST00000546947 DDX54Q8TDD1 881 aaKnown RBP20.19■□□□□ 0.82
CCDC38-205ENST00000546947 PER1O15534 1290 aaPredicted RBP20.18■□□□□ 0.82
CCDC38-205ENST00000546947 BTAF1O14981 1849 aa20.18■□□□□ 0.82
CCDC38-205ENST00000546947 ACSBG1Q96GR2 724 aa20.17■□□□□ 0.82
CCDC38-205ENST00000546947 PKD1L3Q7Z443 1732 aa20.16■□□□□ 0.82
CCDC38-205ENST00000546947 DOT1LQ8TEK3 1739 aa20.16■□□□□ 0.82
CCDC38-205ENST00000546947 KCNQ2O43526 872 aa20.16■□□□□ 0.82
CCDC38-205ENST00000546947 MSH5O43196 834 aa20.15■□□□□ 0.82
CCDC38-205ENST00000546947 EIF4A2Q14240 407 aaKnown RBP20.15■□□□□ 0.82
CCDC38-205ENST00000546947 NBPF14Q5TI25 921 aa20.15■□□□□ 0.82
CCDC38-205ENST00000546947 EYA1Q99502 592 aa20.15■□□□□ 0.82
CCDC38-205ENST00000546947 PSDA5PKW4 1024 aaPredicted RBP20.14■□□□□ 0.81
CCDC38-205ENST00000546947 NPC1L1Q9UHC9 1359 aa20.13■□□□□ 0.81
CCDC38-205ENST00000546947 PCDH11XQ9BZA7 1347 aa20.13■□□□□ 0.81
CCDC38-205ENST00000546947 PCDH11YQ9BZA8 1340 aa20.13■□□□□ 0.81
CCDC38-205ENST00000546947 R3HDM1Q15032 1099 aaKnown RBP20.13■□□□□ 0.81
CCDC38-205ENST00000546947 PLEKHG2Q9H7P9 1386 aa20.11■□□□□ 0.81
CCDC38-205ENST00000546947 LRP5O75197 1615 aa20.1■□□□□ 0.81
CCDC38-205ENST00000546947 IGSF1Q8N6C5 1336 aa20.1■□□□□ 0.81
CCDC38-205ENST00000546947 PROM2Q8N271 834 aa20.1■□□□□ 0.81
CCDC38-205ENST00000546947 SRCAPQ6ZRS2 3230 aa20.1■□□□□ 0.81
CCDC38-205ENST00000546947 TXNRD1Q16881 649 aa20.09■□□□□ 0.81
CCDC38-205ENST00000546947 CC2D1BQ5T0F9 858 aaKnown RBP20.09■□□□□ 0.81
CCDC38-205ENST00000546947 SPG7Q9UQ90 795 aa20.09■□□□□ 0.81
CCDC38-205ENST00000546947 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.08■□□□□ 0.81
CCDC38-205ENST00000546947 PRIM1P49642 420 aaKnown RBP20.07■□□□□ 0.8
CCDC38-205ENST00000546947 SYTL4Q96C24 671 aaPredicted RBP20.07■□□□□ 0.8
CCDC38-205ENST00000546947 CYP27B1O15528 508 aa20.06■□□□□ 0.8
CCDC38-205ENST00000546947 ITGB4P16144 1822 aa20.06■□□□□ 0.8
CCDC38-205ENST00000546947 LY75O60449 1722 aa20.05■□□□□ 0.8
CCDC38-205ENST00000546947 MTHFSP49914 203 aa20.05■□□□□ 0.8
CCDC38-205ENST00000546947 TOGARAM1Q9Y4F4 1720 aa20.05■□□□□ 0.8
CCDC38-205ENST00000546947 ANO8Q9HCE9 1232 aaPredicted RBP20.04■□□□□ 0.8
CCDC38-205ENST00000546947 PAPPAQ13219 1627 aa20.03■□□□□ 0.8
CCDC38-205ENST00000546947 IL13P35225 146 aa20.03■□□□□ 0.8
CCDC38-205ENST00000546947 NKX1-1Q15270 411 aaPredicted RBP20.03■□□□□ 0.8
CCDC38-205ENST00000546947 SLC27A3Q5K4L6 730 aa20.01■□□□□ 0.79
CCDC38-205ENST00000546947 IFNL2Q8IZJ0 200 aa20.01■□□□□ 0.79
CCDC38-205ENST00000546947 STK32BQ9NY57 414 aa20.01■□□□□ 0.79
CCDC38-205ENST00000546947 CASZ1Q86V15 1759 aa20■□□□□ 0.79
CCDC38-205ENST00000546947 PHKG2P15735 406 aa20■□□□□ 0.79
CCDC38-205ENST00000546947 KDRP35968 1356 aa19.99■□□□□ 0.79
CCDC38-205ENST00000546947 SLC15A2Q16348 729 aa19.99■□□□□ 0.79
CCDC38-205ENST00000546947 AMOTQ4VCS5 1084 aa19.99■□□□□ 0.79
CCDC38-205ENST00000546947 PLEKHO1Q53GL0 409 aaPredicted RBP19.99■□□□□ 0.79
CCDC38-205ENST00000546947 CNGB1Q14028 1251 aaPredicted RBP19.98■□□□□ 0.79
CCDC38-205ENST00000546947 SULT6B1Q6IMI4 303 aa19.98■□□□□ 0.79
CCDC38-205ENST00000546947 LRRC4BQ9NT99 713 aa19.98■□□□□ 0.79
CCDC38-205ENST00000546947 DIAPH1O60610 1272 aaKnown RBP19.97■□□□□ 0.79
CCDC38-205ENST00000546947 AEBP1Q8IUX7 1158 aa19.97■□□□□ 0.79
CCDC38-205ENST00000546947 QSER1Q2KHR3 1735 aa19.96■□□□□ 0.79
CCDC38-205ENST00000546947 MPRIPQ6WCQ1 1025 aa19.96■□□□□ 0.79
CCDC38-205ENST00000546947 COL3A1P02461 1466 aaPredicted RBP19.95■□□□□ 0.78
CCDC38-205ENST00000546947 HSP90AB1P08238 724 aaKnown RBP19.95■□□□□ 0.78
CCDC38-205ENST00000546947 TAF1LQ8IZX4 1826 aa19.93■□□□□ 0.78
CCDC38-205ENST00000546947 HMGB2P26583 209 aaKnown RBP19.93■□□□□ 0.78
CCDC38-205ENST00000546947 ZNF530Q6P9A1 599 aaPredicted RBP19.93■□□□□ 0.78
CCDC38-205ENST00000546947 SMARCC1Q92922 1105 aaPredicted RBP19.93■□□□□ 0.78
CCDC38-205ENST00000546947 SPON1Q9HCB6 807 aa19.93■□□□□ 0.78
CCDC38-205ENST00000546947 CCNL1Q9UK58 526 aaPredicted RBP19.93■□□□□ 0.78
CCDC38-205ENST00000546947 PALLDQ8WX93 1383 aa19.93■□□□□ 0.78
CCDC38-205ENST00000546947 C5P01031 1676 aa19.92■□□□□ 0.78
CCDC38-205ENST00000546947 PIGBQ92521 554 aa19.92■□□□□ 0.78
CCDC38-205ENST00000546947 AKT1S1Q96B36 256 aa19.92■□□□□ 0.78
CCDC38-205ENST00000546947 TMOD3Q9NYL9 352 aa19.92■□□□□ 0.78
CCDC38-205ENST00000546947 TUBGCP6Q96RT7 1819 aa19.92■□□□□ 0.78
CCDC38-205ENST00000546947 ZNF827Q17R98 1081 aa19.91■□□□□ 0.78
CCDC38-205ENST00000546947 C1orf141Q5JVX7 400 aa19.91■□□□□ 0.78
CCDC38-205ENST00000546947 DCAF5Q96JK2 942 aa19.91■□□□□ 0.78
CCDC38-205ENST00000546947 ERVV-2B6SEH9 535 aa19.9■□□□□ 0.78
CCDC38-205ENST00000546947 CFAP53Q96M91 514 aa19.9■□□□□ 0.78
CCDC38-205ENST00000546947 SCN11AQ9UI33 1791 aa19.9■□□□□ 0.78
CCDC38-205ENST00000546947 HMOX1P09601 288 aa19.89■□□□□ 0.77
CCDC38-205ENST00000546947 KCNQ4P56696 695 aa19.89■□□□□ 0.77
CCDC38-205ENST00000546947 VIRMAQ69YN4 1812 aaKnown RBP19.89■□□□□ 0.77
CCDC38-205ENST00000546947 PDGFDQ9GZP0 370 aaPredicted RBP19.89■□□□□ 0.77
CCDC38-205ENST00000546947 KDM6AO15550 1401 aaPredicted RBP19.88■□□□□ 0.77
CCDC38-205ENST00000546947 PPP2R1AP30153 589 aa19.88■□□□□ 0.77
CCDC38-205ENST00000546947 ZEB1P37275 1124 aaPredicted RBP19.87■□□□□ 0.77
CCDC38-205ENST00000546947 U2SURPO15042 1029 aaKnown RBP19.86■□□□□ 0.77
CCDC38-205ENST00000546947 AKAP4Q5JQC9 854 aa19.86■□□□□ 0.77
CCDC38-205ENST00000546947 ZBTB7AO95365 584 aa19.85■□□□□ 0.77
CCDC38-205ENST00000546947 MTFR1LQ9H019 292 aa19.85■□□□□ 0.77
CCDC38-205ENST00000546947 TFCP2L1Q9NZI6 479 aa19.85■□□□□ 0.77
CCDC38-205ENST00000546947 ASAP1Q9ULH1 1129 aa19.85■□□□□ 0.77
CCDC38-205ENST00000546947 C4BP0C0L5 1744 aa19.85■□□□□ 0.77
CCDC38-205ENST00000546947 ZNF831Q5JPB2 1677 aa19.84■□□□□ 0.77
CCDC38-205ENST00000546947 NUDCQ9Y266 331 aa19.84■□□□□ 0.77
CCDC38-205ENST00000546947 PNPLA7Q6ZV29 1317 aa19.83■□□□□ 0.77
CCDC38-205ENST00000546947 LOC102724428A0A0B4J2F2 783 aa19.83■□□□□ 0.77
CCDC38-205ENST00000546947 SIK1P57059 783 aa19.83■□□□□ 0.77
CCDC38-205ENST00000546947 CABP4P57796 275 aa19.83■□□□□ 0.77
CCDC38-205ENST00000546947 SLC16A10Q8TF71 515 aa19.83■□□□□ 0.77
CCDC38-205ENST00000546947 ATG3Q9NT62 314 aa19.83■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms