RNA–Protein interactions for RNA: ENST00000546814.1

LETMD1-204, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 894 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-204ENST00000546814 ERBB3P21860 1342 aa9.74□□□□□ -0.85
LETMD1-204ENST00000546814 QSER1Q2KHR3 1735 aa9.73□□□□□ -0.85
LETMD1-204ENST00000546814 SLC27A3Q5K4L6 730 aa9.73□□□□□ -0.85
LETMD1-204ENST00000546814 PUS7Q96PZ0 661 aaKnown RBP9.72□□□□□ -0.85
LETMD1-204ENST00000546814 IL2RBP14784 551 aa9.71□□□□□ -0.86
LETMD1-204ENST00000546814 LRRC4BQ9NT99 713 aa9.71□□□□□ -0.86
LETMD1-204ENST00000546814 ZNF827Q17R98 1081 aa9.7□□□□□ -0.86
LETMD1-204ENST00000546814 CD163L1Q9NR16 1453 aa9.7□□□□□ -0.86
LETMD1-204ENST00000546814 MON2Q7Z3U7 1717 aa9.7□□□□□ -0.86
LETMD1-204ENST00000546814 RGPD5Q99666 1765 aa9.7□□□□□ -0.86
LETMD1-204ENST00000546814 CSB-PGBD3P0DP91 1061 aa9.69□□□□□ -0.86
LETMD1-204ENST00000546814 IFFO2Q5TF58 517 aa9.69□□□□□ -0.86
LETMD1-204ENST00000546814 KTN1Q86UP2 1357 aaKnown RBP9.69□□□□□ -0.86
LETMD1-204ENST00000546814 BTAF1O14981 1849 aa9.68□□□□□ -0.86
LETMD1-204ENST00000546814 PNPLA7Q6ZV29 1317 aa9.68□□□□□ -0.86
LETMD1-204ENST00000546814 HMGB2P26583 209 aaKnown RBP9.68□□□□□ -0.86
LETMD1-204ENST00000546814 ERICH6Q7L0X2 663 aa9.68□□□□□ -0.86
LETMD1-204ENST00000546814 L3MBTL2Q969R5 705 aa9.68□□□□□ -0.86
LETMD1-204ENST00000546814 EDC4Q6P2E9 1401 aaKnown RBP9.67□□□□□ -0.86
LETMD1-204ENST00000546814 SENP3-EIF4A1A0A087X0R7 540 aa9.67□□□□□ -0.86
LETMD1-204ENST00000546814 NSD2O96028 1365 aa9.66□□□□□ -0.86
LETMD1-204ENST00000546814 ANKRD36BQ8N2N9 1353 aa9.66□□□□□ -0.86
LETMD1-204ENST00000546814 SHANK3Q9BYB0 1731 aa9.66□□□□□ -0.86
LETMD1-204ENST00000546814 ZBTB7CA1YPR0 619 aa9.66□□□□□ -0.86
LETMD1-204ENST00000546814 GRIN3BO60391 1043 aa9.66□□□□□ -0.86
LETMD1-204ENST00000546814 GIGYF1O75420 1035 aaPredicted RBP9.66□□□□□ -0.86
LETMD1-204ENST00000546814 POLD1P28340 1107 aa9.66□□□□□ -0.86
LETMD1-204ENST00000546814 IP6K1Q92551 441 aa9.66□□□□□ -0.86
LETMD1-204ENST00000546814 FAM208AQ9UK61 1670 aaKnown RBP9.65□□□□□ -0.86
LETMD1-204ENST00000546814 PRR29P0C7W0 189 aa9.65□□□□□ -0.86
LETMD1-204ENST00000546814 PRKAR2AP13861 404 aaKnown RBP9.65□□□□□ -0.86
LETMD1-204ENST00000546814 GPR162Q16538 588 aa9.65□□□□□ -0.86
LETMD1-204ENST00000546814 ANKRD24Q8TF21 1146 aa9.65□□□□□ -0.86
LETMD1-204ENST00000546814 ACSBG1Q96GR2 724 aa9.65□□□□□ -0.86
LETMD1-204ENST00000546814 NLRP2Q9NX02 1062 aa9.65□□□□□ -0.86
LETMD1-204ENST00000546814 LY75O60449 1722 aa9.65□□□□□ -0.87
LETMD1-204ENST00000546814 ROCK2O75116 1388 aaKnown RBP9.64□□□□□ -0.87
LETMD1-204ENST00000546814 CGNL1Q0VF96 1302 aa9.64□□□□□ -0.87
LETMD1-204ENST00000546814 ADCY9O60503 1353 aa9.63□□□□□ -0.87
LETMD1-204ENST00000546814 NME9Q86XW9 330 aa9.63□□□□□ -0.87
LETMD1-204ENST00000546814 CD2APQ9Y5K6 639 aa9.63□□□□□ -0.87
LETMD1-204ENST00000546814 LTN1O94822 1766 aa9.63□□□□□ -0.87
LETMD1-204ENST00000546814 TERF2IPQ9NYB0 399 aa9.62□□□□□ -0.87
LETMD1-204ENST00000546814 TFCP2L1Q9NZI6 479 aa9.62□□□□□ -0.87
LETMD1-204ENST00000546814 YBX3P16989 372 aaKnown RBP eCLIP9.61□□□□□ -0.875e-13■■□□□ 14.4
LETMD1-204ENST00000546814 HDGFL2Q7Z4V5 671 aaPredicted RBP9.61□□□□□ -0.87
LETMD1-204ENST00000546814 FLAD1Q8NFF5 587 aa9.61□□□□□ -0.87
LETMD1-204ENST00000546814 NLGN2Q8NFZ4 835 aa9.61□□□□□ -0.87
LETMD1-204ENST00000546814 A0A1W2PP64 1363 aa9.61□□□□□ -0.87
LETMD1-204ENST00000546814 RTL1A6NKG5 1358 aa9.61□□□□□ -0.87
LETMD1-204ENST00000546814 TUBGCP6Q96RT7 1819 aa9.61□□□□□ -0.87
LETMD1-204ENST00000546814 SOX12O15370 315 aa9.6□□□□□ -0.87
LETMD1-204ENST00000546814 PRIM1P49642 420 aaKnown RBP9.6□□□□□ -0.87
LETMD1-204ENST00000546814 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.6□□□□□ -0.87
LETMD1-204ENST00000546814 ZCRB1Q8TBF4 217 aaKnown RBP9.59□□□□□ -0.87
LETMD1-204ENST00000546814 SLC12A5Q9H2X9 1139 aa9.59□□□□□ -0.87
LETMD1-204ENST00000546814 KIF24Q5T7B8 1368 aa9.59□□□□□ -0.87
LETMD1-204ENST00000546814 MAP3K19Q56UN5 1328 aa9.58□□□□□ -0.88
LETMD1-204ENST00000546814 MEGF6O75095 1541 aa9.58□□□□□ -0.88
LETMD1-204ENST00000546814 HOXC9P31274 260 aa9.58□□□□□ -0.88
LETMD1-204ENST00000546814 CHADLQ6NUI6 762 aa9.58□□□□□ -0.88
LETMD1-204ENST00000546814 COL23A1Q86Y22 540 aaPredicted RBP9.58□□□□□ -0.88
LETMD1-204ENST00000546814 DDX54Q8TDD1 881 aaKnown RBP9.58□□□□□ -0.88
LETMD1-204ENST00000546814 CCNL1Q9UK58 526 aaPredicted RBP9.58□□□□□ -0.88
LETMD1-204ENST00000546814 ATP10DQ9P241 1426 aa9.57□□□□□ -0.88
LETMD1-204ENST00000546814 TESK2Q96S53 571 aa9.57□□□□□ -0.88
LETMD1-204ENST00000546814 USP47Q96K76 1375 aa9.57□□□□□ -0.88
LETMD1-204ENST00000546814 KAT6BQ8WYB5 2073 aa9.57□□□□□ -0.88
LETMD1-204ENST00000546814 NCAPD2Q15021 1401 aa9.56□□□□□ -0.88
LETMD1-204ENST00000546814 DOT1LQ8TEK3 1739 aa9.56□□□□□ -0.88
LETMD1-204ENST00000546814 PLEKHG2Q9H7P9 1386 aa9.56□□□□□ -0.88
LETMD1-204ENST00000546814 HSPA6P17066 643 aa9.56□□□□□ -0.88
LETMD1-204ENST00000546814 CICQ96RK0 1608 aaPredicted RBP9.56□□□□□ -0.88
LETMD1-204ENST00000546814 NSD3Q9BZ95 1437 aa9.56□□□□□ -0.88
LETMD1-204ENST00000546814 NKX1-1Q15270 411 aaPredicted RBP9.55□□□□□ -0.88
LETMD1-204ENST00000546814 COG3Q96JB2 828 aa9.55□□□□□ -0.88
LETMD1-204ENST00000546814 INSRP06213 1382 aa9.54□□□□□ -0.88
LETMD1-204ENST00000546814 KCNQ4P56696 695 aa9.54□□□□□ -0.88
LETMD1-204ENST00000546814 NBPF6Q5VWK0 638 aa9.54□□□□□ -0.88
LETMD1-204ENST00000546814 NBPF4Q96M43 638 aa9.54□□□□□ -0.88
LETMD1-204ENST00000546814 SIN3AQ96ST3 1273 aa9.54□□□□□ -0.88
LETMD1-204ENST00000546814 CARD11Q9BXL7 1154 aa9.54□□□□□ -0.88
LETMD1-204ENST00000546814 GPBP1L1Q9HC44 474 aaPredicted RBP9.54□□□□□ -0.88
LETMD1-204ENST00000546814 CREBZFQ9NS37 354 aa9.54□□□□□ -0.88
LETMD1-204ENST00000546814 C5P01031 1676 aa9.54□□□□□ -0.88
LETMD1-204ENST00000546814 PCDH11XQ9BZA7 1347 aa9.54□□□□□ -0.88
LETMD1-204ENST00000546814 PCDH11YQ9BZA8 1340 aa9.54□□□□□ -0.88
LETMD1-204ENST00000546814 TMC1Q8TDI8 760 aa9.53□□□□□ -0.88
LETMD1-204ENST00000546814 SMARCC1Q92922 1105 aaPredicted RBP9.53□□□□□ -0.88
LETMD1-204ENST00000546814 SYTL4Q96C24 671 aaPredicted RBP9.53□□□□□ -0.88
LETMD1-204ENST00000546814 TAF1LQ8IZX4 1826 aa9.53□□□□□ -0.88
LETMD1-204ENST00000546814 PALLDQ8WX93 1383 aa9.52□□□□□ -0.88
LETMD1-204ENST00000546814 C19orf67A6NJJ6 358 aa9.52□□□□□ -0.89
LETMD1-204ENST00000546814 HAX1O00165 279 aa9.52□□□□□ -0.89
LETMD1-204ENST00000546814 KIF3CO14782 793 aa9.52□□□□□ -0.89
LETMD1-204ENST00000546814 FYB1O15117 783 aa9.52□□□□□ -0.89
LETMD1-204ENST00000546814 SSFA2P28290 1259 aa9.52□□□□□ -0.89
LETMD1-204ENST00000546814 AMPHP49418 695 aa9.52□□□□□ -0.89
LETMD1-204ENST00000546814 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.52□□□□□ -0.89
LETMD1-204ENST00000546814 PCNTO95613 3336 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms