RNA–Protein interactions for RNA: ENST00000546653.5

VDR-203, Transcript of vitamin D receptor, humanhuman

TSL 5

Gene VDR, Length 937 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDR-203ENST00000546653 USP31Q70CQ4 1352 aa19.28■□□□□ 0.68
VDR-203ENST00000546653 EVC2Q86UK5 1308 aa19.27■□□□□ 0.68
VDR-203ENST00000546653 APLP1P51693 650 aa19.27■□□□□ 0.68
VDR-203ENST00000546653 SYTL4Q96C24 671 aaPredicted RBP19.27■□□□□ 0.68
VDR-203ENST00000546653 CCNL1Q9UK58 526 aaPredicted RBP19.27■□□□□ 0.68
VDR-203ENST00000546653 KTN1Q86UP2 1357 aaKnown RBP19.27■□□□□ 0.68
VDR-203ENST00000546653 C5P01031 1676 aa19.24■□□□□ 0.67
VDR-203ENST00000546653 TAF1LQ8IZX4 1826 aa19.23■□□□□ 0.67
VDR-203ENST00000546653 COL13A1Q5TAT6 717 aaPredicted RBP19.23■□□□□ 0.67
VDR-203ENST00000546653 WWC3Q9ULE0 1092 aa19.23■□□□□ 0.67
VDR-203ENST00000546653 FAM208AQ9UK61 1670 aaKnown RBP19.22■□□□□ 0.67
VDR-203ENST00000546653 NME9Q86XW9 330 aa19.22■□□□□ 0.67
VDR-203ENST00000546653 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.22■□□□□ 0.67
VDR-203ENST00000546653 WDR90Q96KV7 1748 aa19.22■□□□□ 0.67
VDR-203ENST00000546653 IGSF1Q8N6C5 1336 aa19.22■□□□□ 0.67
VDR-203ENST00000546653 CICQ96RK0 1608 aaPredicted RBP19.21■□□□□ 0.67
VDR-203ENST00000546653 RGPD2P0DJD1 1756 aa19.2■□□□□ 0.66
VDR-203ENST00000546653 TOGARAM1Q9Y4F4 1720 aa19.19■□□□□ 0.66
VDR-203ENST00000546653 SBNO2Q9Y2G9 1366 aa19.19■□□□□ 0.66
VDR-203ENST00000546653 CD163L1Q9NR16 1453 aa19.18■□□□□ 0.66
VDR-203ENST00000546653 CAPN15O75808 1086 aa19.18■□□□□ 0.66
VDR-203ENST00000546653 TOMM70O94826 608 aa19.18■□□□□ 0.66
VDR-203ENST00000546653 USP47Q96K76 1375 aa19.17■□□□□ 0.66
VDR-203ENST00000546653 AMIGO3Q86WK7 504 aa19.16■□□□□ 0.66
VDR-203ENST00000546653 UBR3Q6ZT12 1888 aa19.16■□□□□ 0.66
VDR-203ENST00000546653 MEGF6O75095 1541 aa19.15■□□□□ 0.66
VDR-203ENST00000546653 FLAD1Q8NFF5 587 aa19.15■□□□□ 0.66
VDR-203ENST00000546653 IP6K1Q92551 441 aa19.15■□□□□ 0.66
VDR-203ENST00000546653 LTV1Q96GA3 475 aaPredicted RBP19.15■□□□□ 0.66
VDR-203ENST00000546653 HTRA3P83110 453 aa19.14■□□□□ 0.65
VDR-203ENST00000546653 JMYQ8N9B5 988 aa19.14■□□□□ 0.65
VDR-203ENST00000546653 ZCRB1Q8TBF4 217 aaKnown RBP19.14■□□□□ 0.65
VDR-203ENST00000546653 C4BP0C0L5 1744 aa19.14■□□□□ 0.65
VDR-203ENST00000546653 KIAA1551Q9HCM1 1747 aa19.12■□□□□ 0.65
VDR-203ENST00000546653 PRELPP51888 382 aa19.12■□□□□ 0.65
VDR-203ENST00000546653 KLRG1Q96E93 195 aa19.12■□□□□ 0.65
VDR-203ENST00000546653 NMRK2Q9NPI5 230 aa19.12■□□□□ 0.65
VDR-203ENST00000546653 SMIM5Q71RC9 77 aa19.11■□□□□ 0.65
VDR-203ENST00000546653 TNS4Q8IZW8 715 aa19.1■□□□□ 0.65
VDR-203ENST00000546653 KIF13BQ9NQT8 1826 aa19.09■□□□□ 0.65
VDR-203ENST00000546653 N4BP2Q86UW6 1770 aaPredicted RBP19.09■□□□□ 0.65
VDR-203ENST00000546653 PALLDQ8WX93 1383 aa19.08■□□□□ 0.65
VDR-203ENST00000546653 EDC4Q6P2E9 1401 aaKnown RBP19.08■□□□□ 0.64
VDR-203ENST00000546653 ITGB4P16144 1822 aa19.07■□□□□ 0.64
VDR-203ENST00000546653 RBM46Q8TBY0 533 aaKnown RBP19.07■□□□□ 0.64
VDR-203ENST00000546653 PXDNLA1KZ92 1463 aa19.06■□□□□ 0.64
VDR-203ENST00000546653 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.05■□□□□ 0.64
VDR-203ENST00000546653 PHF14O94880 888 aa19.05■□□□□ 0.64
VDR-203ENST00000546653 HOXC9P31274 260 aa19.05■□□□□ 0.64
VDR-203ENST00000546653 AK7Q96M32 723 aa19.05■□□□□ 0.64
VDR-203ENST00000546653 MAP2P11137 1827 aaKnown RBP19.04■□□□□ 0.64
VDR-203ENST00000546653 MAP3K19Q56UN5 1328 aa19.04■□□□□ 0.64
VDR-203ENST00000546653 L3MBTL2Q969R5 705 aa19.04■□□□□ 0.64
VDR-203ENST00000546653 SLC12A5Q9H2X9 1139 aa19.04■□□□□ 0.64
VDR-203ENST00000546653 BRCA1P38398 1863 aaKnown RBP19.03■□□□□ 0.64
VDR-203ENST00000546653 FBLN1P23142 703 aa19.03■□□□□ 0.64
VDR-203ENST00000546653 A0A1W2PP64 1363 aa19.03■□□□□ 0.64
VDR-203ENST00000546653 HMGB2P26583 209 aaKnown RBP19.02■□□□□ 0.64
VDR-203ENST00000546653 NBPF6Q5VWK0 638 aa19.02■□□□□ 0.64
VDR-203ENST00000546653 MPRIPQ6WCQ1 1025 aa19.02■□□□□ 0.64
VDR-203ENST00000546653 HDGFL2Q7Z4V5 671 aaPredicted RBP19.02■□□□□ 0.64
VDR-203ENST00000546653 TMC1Q8TDI8 760 aa19.02■□□□□ 0.64
VDR-203ENST00000546653 NBPF4Q96M43 638 aa19.02■□□□□ 0.64
VDR-203ENST00000546653 ROCK2O75116 1388 aaKnown RBP19.02■□□□□ 0.64
VDR-203ENST00000546653 USHBP1Q8N6Y0 703 aa19.01■□□□□ 0.63
VDR-203ENST00000546653 CGNL1Q0VF96 1302 aa19■□□□□ 0.63
VDR-203ENST00000546653 SSFA2P28290 1259 aa19■□□□□ 0.63
VDR-203ENST00000546653 FSTL1Q12841 308 aa19■□□□□ 0.63
VDR-203ENST00000546653 BCS1LQ9Y276 419 aa19■□□□□ 0.63
VDR-203ENST00000546653 PKD1L3Q7Z443 1732 aa19■□□□□ 0.63
VDR-203ENST00000546653 NSD3Q9BZ95 1437 aa19■□□□□ 0.63
VDR-203ENST00000546653 AMPHP49418 695 aa18.99■□□□□ 0.63
VDR-203ENST00000546653 ARHGAP27Q6ZUM4 889 aa18.99■□□□□ 0.63
VDR-203ENST00000546653 A0A0G2JLW4 131 aa18.98■□□□□ 0.63
VDR-203ENST00000546653 LINC00116Q8NCU8 138 aa18.98■□□□□ 0.63
VDR-203ENST00000546653 ARFGEF1Q9Y6D6 1849 aa18.97■□□□□ 0.63
VDR-203ENST00000546653 MMP10P09238 476 aa18.97■□□□□ 0.63
VDR-203ENST00000546653 TGFB2P61812 414 aa18.97■□□□□ 0.63
VDR-203ENST00000546653 C16orf71Q8IYS4 520 aaPredicted RBP18.97■□□□□ 0.63
VDR-203ENST00000546653 SMARCC1Q92922 1105 aaPredicted RBP18.97■□□□□ 0.63
VDR-203ENST00000546653 KCPQ6ZWJ8 1503 aa18.96■□□□□ 0.63
VDR-203ENST00000546653 CYP27B1O15528 508 aa18.96■□□□□ 0.63
VDR-203ENST00000546653 RAPGEF4Q8WZA2 1011 aa18.96■□□□□ 0.63
VDR-203ENST00000546653 TERF2IPQ9NYB0 399 aa18.96■□□□□ 0.63
VDR-203ENST00000546653 C10orf71Q711Q0 1435 aa18.96■□□□□ 0.63
VDR-203ENST00000546653 PCDH11XQ9BZA7 1347 aa18.96■□□□□ 0.63
VDR-203ENST00000546653 PCDH11YQ9BZA8 1340 aa18.96■□□□□ 0.63
VDR-203ENST00000546653 C9orf131Q5VYM1 1079 aa18.95■□□□□ 0.62
VDR-203ENST00000546653 PIGBQ92521 554 aa18.95■□□□□ 0.62
VDR-203ENST00000546653 PLEKHG2Q9H7P9 1386 aa18.94■□□□□ 0.62
VDR-203ENST00000546653 TATP17735 454 aaPredicted RBP18.94■□□□□ 0.62
VDR-203ENST00000546653 RTL1A6NKG5 1358 aa18.93■□□□□ 0.62
VDR-203ENST00000546653 SBF1O95248 1867 aa18.93■□□□□ 0.62
VDR-203ENST00000546653 TNRC6CQ9HCJ0 1690 aaKnown RBP18.93■□□□□ 0.62
VDR-203ENST00000546653 DPEP1P16444 411 aa18.93■□□□□ 0.62
VDR-203ENST00000546653 COG3Q96JB2 828 aa18.93■□□□□ 0.62
VDR-203ENST00000546653 LOC102724428A0A0B4J2F2 783 aa18.92■□□□□ 0.62
VDR-203ENST00000546653 GNPATO15228 680 aa18.92■□□□□ 0.62
VDR-203ENST00000546653 FCHSD2O94868 740 aa18.92■□□□□ 0.62
VDR-203ENST00000546653 HSPA1AP0DMV8 641 aaKnown RBP18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms