RNA–Protein interactions for RNA: ENST00000546546.1

NOVA1-207, Transcript of NOVA alternative splicing regulator 1, humanhuman

TSL 4

Gene NOVA1, Length 563 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOVA1-207ENST00000546546 PRIM1P49642 420 aaKnown RBP17.67■□□□□ 0.42
NOVA1-207ENST00000546546 FAM208AQ9UK61 1670 aaKnown RBP17.67■□□□□ 0.42
NOVA1-207ENST00000546546 MAP2P11137 1827 aaKnown RBP17.66■□□□□ 0.42
NOVA1-207ENST00000546546 PLSCR1O15162 318 aa17.66■□□□□ 0.42
NOVA1-207ENST00000546546 ZEB1P37275 1124 aaPredicted RBP17.66■□□□□ 0.42
NOVA1-207ENST00000546546 R3HDM1Q15032 1099 aaKnown RBP17.66■□□□□ 0.42
NOVA1-207ENST00000546546 ANKRD26Q9UPS8 1709 aa17.66■□□□□ 0.42
NOVA1-207ENST00000546546 SPG7Q9UQ90 795 aa17.65■□□□□ 0.42
NOVA1-207ENST00000546546 PCDH11XQ9BZA7 1347 aa17.65■□□□□ 0.42
NOVA1-207ENST00000546546 PCDH11YQ9BZA8 1340 aa17.65■□□□□ 0.42
NOVA1-207ENST00000546546 TNS1Q9HBL0 1735 aaKnown RBP17.64■□□□□ 0.41
NOVA1-207ENST00000546546 CYP27B1O15528 508 aa17.64■□□□□ 0.41
NOVA1-207ENST00000546546 IL13P35225 146 aa17.64■□□□□ 0.41
NOVA1-207ENST00000546546 AEBP1Q8IUX7 1158 aa17.64■□□□□ 0.41
NOVA1-207ENST00000546546 NPC1L1Q9UHC9 1359 aa17.64■□□□□ 0.41
NOVA1-207ENST00000546546 DDX10Q13206 875 aaKnown RBP17.63■□□□□ 0.41
NOVA1-207ENST00000546546 NBPF14Q5TI25 921 aa17.63■□□□□ 0.41
NOVA1-207ENST00000546546 SULT6B1Q6IMI4 303 aa17.63■□□□□ 0.41
NOVA1-207ENST00000546546 IGSF1Q8N6C5 1336 aa17.63■□□□□ 0.41
NOVA1-207ENST00000546546 PARD3Q8TEW0 1356 aa17.63■□□□□ 0.41
NOVA1-207ENST00000546546 TXNRD1Q16881 649 aa17.62■□□□□ 0.41
NOVA1-207ENST00000546546 PROM2Q8N271 834 aa17.62■□□□□ 0.41
NOVA1-207ENST00000546546 DIAPH1O60610 1272 aaKnown RBP17.61■□□□□ 0.41
NOVA1-207ENST00000546546 HMOX1P09601 288 aa17.6■□□□□ 0.41
NOVA1-207ENST00000546546 NCAPD2Q15021 1401 aa17.6■□□□□ 0.41
NOVA1-207ENST00000546546 U2SURPO15042 1029 aaKnown RBP17.59■□□□□ 0.41
NOVA1-207ENST00000546546 PLEKHO1Q53GL0 409 aaPredicted RBP17.59■□□□□ 0.41
NOVA1-207ENST00000546546 MPRIPQ6WCQ1 1025 aa17.59■□□□□ 0.41
NOVA1-207ENST00000546546 IFNL2Q8IZJ0 200 aa17.58■□□□□ 0.4
NOVA1-207ENST00000546546 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.58■□□□□ 0.4
NOVA1-207ENST00000546546 PHKG2P15735 406 aa17.57■□□□□ 0.4
NOVA1-207ENST00000546546 PPP2R1AP30153 589 aa17.57■□□□□ 0.4
NOVA1-207ENST00000546546 KCNQ4P56696 695 aa17.57■□□□□ 0.4
NOVA1-207ENST00000546546 SBF2Q86WG5 1849 aa17.56■□□□□ 0.4
NOVA1-207ENST00000546546 ZNF530Q6P9A1 599 aaPredicted RBP17.56■□□□□ 0.4
NOVA1-207ENST00000546546 CFAP53Q96M91 514 aa17.56■□□□□ 0.4
NOVA1-207ENST00000546546 ANO8Q9HCE9 1232 aaPredicted RBP17.56■□□□□ 0.4
NOVA1-207ENST00000546546 AMOTQ4VCS5 1084 aa17.55■□□□□ 0.4
NOVA1-207ENST00000546546 NKX1-1Q15270 411 aaPredicted RBP17.54■□□□□ 0.4
NOVA1-207ENST00000546546 LRRC4BQ9NT99 713 aa17.54■□□□□ 0.4
NOVA1-207ENST00000546546 STK32BQ9NY57 414 aa17.54■□□□□ 0.4
NOVA1-207ENST00000546546 NHSQ6T4R5 1651 aa17.53■□□□□ 0.4
NOVA1-207ENST00000546546 C1orf141Q5JVX7 400 aa17.53■□□□□ 0.4
NOVA1-207ENST00000546546 PIGBQ92521 554 aa17.53■□□□□ 0.4
NOVA1-207ENST00000546546 SHANK3Q9BYB0 1731 aa17.52■□□□□ 0.39
NOVA1-207ENST00000546546 TMOD3Q9NYL9 352 aa17.51■□□□□ 0.39
NOVA1-207ENST00000546546 CCNL1Q9UK58 526 aaPredicted RBP17.51■□□□□ 0.39
NOVA1-207ENST00000546546 HSP90AB1P08238 724 aaKnown RBP17.5■□□□□ 0.39
NOVA1-207ENST00000546546 SLC15A2Q16348 729 aa17.5■□□□□ 0.39
NOVA1-207ENST00000546546 DCAF5Q96JK2 942 aa17.5■□□□□ 0.39
NOVA1-207ENST00000546546 NUDCQ9Y266 331 aa17.5■□□□□ 0.39
NOVA1-207ENST00000546546 KDRP35968 1356 aa17.5■□□□□ 0.39
NOVA1-207ENST00000546546 KAT6BQ8WYB5 2073 aa17.49■□□□□ 0.39
NOVA1-207ENST00000546546 SLC27A3Q5K4L6 730 aa17.49■□□□□ 0.39
NOVA1-207ENST00000546546 RREB1Q92766 1687 aa17.48■□□□□ 0.39
NOVA1-207ENST00000546546 NUP188Q5SRE5 1749 aa17.48■□□□□ 0.39
NOVA1-207ENST00000546546 DOT1LQ8TEK3 1739 aa17.48■□□□□ 0.39
NOVA1-207ENST00000546546 U2AF1L5P0DN76 240 aaPredicted RBP17.48■□□□□ 0.39
NOVA1-207ENST00000546546 CABP4P57796 275 aa17.48■□□□□ 0.39
NOVA1-207ENST00000546546 U2AF1Q01081 240 aaKnown RBP eCLIP17.48■□□□□ 0.39
NOVA1-207ENST00000546546 MTHFSDQ2M296 383 aaKnown RBP17.48■□□□□ 0.39
NOVA1-207ENST00000546546 PDGFDQ9GZP0 370 aaPredicted RBP17.48■□□□□ 0.39
NOVA1-207ENST00000546546 BTAF1O14981 1849 aa17.47■□□□□ 0.39
NOVA1-207ENST00000546546 ZNF827Q17R98 1081 aa17.47■□□□□ 0.39
NOVA1-207ENST00000546546 SMARCC1Q92922 1105 aaPredicted RBP17.47■□□□□ 0.39
NOVA1-207ENST00000546546 ASAP1Q9ULH1 1129 aa17.47■□□□□ 0.39
NOVA1-207ENST00000546546 PALLDQ8WX93 1383 aa17.47■□□□□ 0.39
NOVA1-207ENST00000546546 COL3A1P02461 1466 aaPredicted RBP17.47■□□□□ 0.39
NOVA1-207ENST00000546546 PKD1L3Q7Z443 1732 aa17.47■□□□□ 0.39
NOVA1-207ENST00000546546 ERVV-2B6SEH9 535 aa17.46■□□□□ 0.39
NOVA1-207ENST00000546546 AKAP4Q5JQC9 854 aa17.46■□□□□ 0.39
NOVA1-207ENST00000546546 PLEKHG2Q9H7P9 1386 aa17.45■□□□□ 0.38
NOVA1-207ENST00000546546 ZBTB7AO95365 584 aa17.45■□□□□ 0.38
NOVA1-207ENST00000546546 PRKAR2BP31323 418 aa17.45■□□□□ 0.38
NOVA1-207ENST00000546546 RALBP1Q15311 655 aa17.45■□□□□ 0.38
NOVA1-207ENST00000546546 LGR6Q9HBX8 967 aa17.45■□□□□ 0.38
NOVA1-207ENST00000546546 TFCP2L1Q9NZI6 479 aa17.45■□□□□ 0.38
NOVA1-207ENST00000546546 NFATC2IPQ8NCF5 419 aa17.44■□□□□ 0.38
NOVA1-207ENST00000546546 AKT1S1Q96B36 256 aa17.43■□□□□ 0.38
NOVA1-207ENST00000546546 RBM42Q9BTD8 480 aaKnown RBP17.43■□□□□ 0.38
NOVA1-207ENST00000546546 ATG3Q9NT62 314 aa17.43■□□□□ 0.38
NOVA1-207ENST00000546546 ATF5Q9Y2D1 282 aaPredicted RBP17.43■□□□□ 0.38
NOVA1-207ENST00000546546 KDM6AO15550 1401 aaPredicted RBP17.43■□□□□ 0.38
NOVA1-207ENST00000546546 RGPD3A6NKT7 1758 aaPredicted RBP17.43■□□□□ 0.38
NOVA1-207ENST00000546546 RGPD4Q7Z3J3 1758 aa17.43■□□□□ 0.38
NOVA1-207ENST00000546546 ZNF316A6NFI3 1004 aaPredicted RBP17.42■□□□□ 0.38
NOVA1-207ENST00000546546 PHACTR3Q96KR7 559 aa17.42■□□□□ 0.38
NOVA1-207ENST00000546546 RSPH6AQ9H0K4 717 aa17.42■□□□□ 0.38
NOVA1-207ENST00000546546 LOC102724428A0A0B4J2F2 783 aa17.41■□□□□ 0.38
NOVA1-207ENST00000546546 RNMTO43148 476 aaKnown RBP17.41■□□□□ 0.38
NOVA1-207ENST00000546546 MSH5O43196 834 aa17.41■□□□□ 0.38
NOVA1-207ENST00000546546 ATP6V1AP38606 617 aa17.41■□□□□ 0.38
NOVA1-207ENST00000546546 SIK1P57059 783 aa17.41■□□□□ 0.38
NOVA1-207ENST00000546546 SPON1Q9HCB6 807 aa17.41■□□□□ 0.38
NOVA1-207ENST00000546546 TOGARAM1Q9Y4F4 1720 aa17.41■□□□□ 0.38
NOVA1-207ENST00000546546 GAS2L2Q8NHY3 880 aa17.4■□□□□ 0.38
NOVA1-207ENST00000546546 PTCD1O75127 700 aaKnown RBP17.39■□□□□ 0.37
NOVA1-207ENST00000546546 FCHSD2O94868 740 aa17.39■□□□□ 0.37
NOVA1-207ENST00000546546 GNAT3A8MTJ3 354 aa17.38■□□□□ 0.37
NOVA1-207ENST00000546546 SLC52A2Q9HAB3 445 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms