RNA–Protein interactions for RNA: ENST00000546425.1

HVCN1-204, Transcript of hydrogen voltage gated channel 1, humanhuman

TSL 3

Gene HVCN1, Length 788 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HVCN1-204ENST00000546425 DOT1LQ8TEK3 1739 aa17.7■□□□□ 0.42
HVCN1-204ENST00000546425 PARD3Q8TEW0 1356 aa17.7■□□□□ 0.42
HVCN1-204ENST00000546425 EN1Q05925 392 aaPredicted RBP17.7■□□□□ 0.42
HVCN1-204ENST00000546425 NBPF6Q5VWK0 638 aa17.7■□□□□ 0.42
HVCN1-204ENST00000546425 MORC1Q86VD1 984 aa17.7■□□□□ 0.42
HVCN1-204ENST00000546425 NBPF4Q96M43 638 aa17.7■□□□□ 0.42
HVCN1-204ENST00000546425 BTAF1O14981 1849 aa17.7■□□□□ 0.42
HVCN1-204ENST00000546425 APBA3O96018 575 aa17.69■□□□□ 0.42
HVCN1-204ENST00000546425 TNNT2P45379 298 aaPredicted RBP17.69■□□□□ 0.42
HVCN1-204ENST00000546425 AMER1Q5JTC6 1135 aaPredicted RBP17.69■□□□□ 0.42
HVCN1-204ENST00000546425 NCAPD2Q15021 1401 aa17.69■□□□□ 0.42
HVCN1-204ENST00000546425 PER1O15534 1290 aaPredicted RBP17.67■□□□□ 0.42
HVCN1-204ENST00000546425 CAMKK2Q96RR4 588 aa17.67■□□□□ 0.42
HVCN1-204ENST00000546425 EZH2Q15910 746 aaKnown RBP17.66■□□□□ 0.42
HVCN1-204ENST00000546425 USHBP1Q8N6Y0 703 aa17.66■□□□□ 0.42
HVCN1-204ENST00000546425 BCL11BQ9C0K0 894 aaPredicted RBP17.66■□□□□ 0.42
HVCN1-204ENST00000546425 RAPGEF4Q8WZA2 1011 aa17.65■□□□□ 0.42
HVCN1-204ENST00000546425 NPC1L1Q9UHC9 1359 aa17.65■□□□□ 0.42
HVCN1-204ENST00000546425 TATP17735 454 aaPredicted RBP17.64■□□□□ 0.41
HVCN1-204ENST00000546425 ZCRB1Q8TBF4 217 aaKnown RBP17.63■□□□□ 0.41
HVCN1-204ENST00000546425 PLSCR1O15162 318 aa17.62■□□□□ 0.41
HVCN1-204ENST00000546425 EIF4A2Q14240 407 aaKnown RBP17.62■□□□□ 0.41
HVCN1-204ENST00000546425 DDX54Q8TDD1 881 aaKnown RBP17.62■□□□□ 0.41
HVCN1-204ENST00000546425 ITGB4P16144 1822 aa17.62■□□□□ 0.41
HVCN1-204ENST00000546425 EYA1Q99502 592 aa17.61■□□□□ 0.41
HVCN1-204ENST00000546425 CC2D1BQ5T0F9 858 aaKnown RBP17.6■□□□□ 0.41
HVCN1-204ENST00000546425 PTF1AQ7RTS3 328 aa17.6■□□□□ 0.41
HVCN1-204ENST00000546425 ACSBG1Q96GR2 724 aa17.6■□□□□ 0.41
HVCN1-204ENST00000546425 PCDH11XQ9BZA7 1347 aa17.6■□□□□ 0.41
HVCN1-204ENST00000546425 PCDH11YQ9BZA8 1340 aa17.6■□□□□ 0.41
HVCN1-204ENST00000546425 PLEKHG2Q9H7P9 1386 aa17.6■□□□□ 0.41
HVCN1-204ENST00000546425 TOGARAM1Q9Y4F4 1720 aa17.6■□□□□ 0.41
HVCN1-204ENST00000546425 LY75O60449 1722 aa17.59■□□□□ 0.41
HVCN1-204ENST00000546425 IGSF1Q8N6C5 1336 aa17.59■□□□□ 0.41
HVCN1-204ENST00000546425 KCNQ2O43526 872 aa17.59■□□□□ 0.41
HVCN1-204ENST00000546425 RNF39Q9H2S5 420 aa17.57■□□□□ 0.4
HVCN1-204ENST00000546425 LRP5O75197 1615 aa17.57■□□□□ 0.4
HVCN1-204ENST00000546425 SPG7Q9UQ90 795 aa17.55■□□□□ 0.4
HVCN1-204ENST00000546425 VIRMAQ69YN4 1812 aaKnown RBP17.55■□□□□ 0.4
HVCN1-204ENST00000546425 MTHFSP49914 203 aa17.54■□□□□ 0.4
HVCN1-204ENST00000546425 NBPF14Q5TI25 921 aa17.54■□□□□ 0.4
HVCN1-204ENST00000546425 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.54■□□□□ 0.4
HVCN1-204ENST00000546425 PAPPAQ13219 1627 aa17.54■□□□□ 0.4
HVCN1-204ENST00000546425 PSDA5PKW4 1024 aaPredicted RBP17.53■□□□□ 0.4
HVCN1-204ENST00000546425 CYP27B1O15528 508 aa17.53■□□□□ 0.4
HVCN1-204ENST00000546425 CACNB1Q02641 598 aaPredicted RBP17.53■□□□□ 0.4
HVCN1-204ENST00000546425 COL3A1P02461 1466 aaPredicted RBP17.52■□□□□ 0.4
HVCN1-204ENST00000546425 IL13P35225 146 aa17.52■□□□□ 0.4
HVCN1-204ENST00000546425 R3HDM1Q15032 1099 aaKnown RBP17.52■□□□□ 0.4
HVCN1-204ENST00000546425 TXNRD1Q16881 649 aa17.52■□□□□ 0.4
HVCN1-204ENST00000546425 SYTL4Q96C24 671 aaPredicted RBP17.52■□□□□ 0.4
HVCN1-204ENST00000546425 KDRP35968 1356 aa17.52■□□□□ 0.39
HVCN1-204ENST00000546425 CASZ1Q86V15 1759 aa17.51■□□□□ 0.39
HVCN1-204ENST00000546425 PRIM1P49642 420 aaKnown RBP17.51■□□□□ 0.39
HVCN1-204ENST00000546425 CNGB1Q14028 1251 aaPredicted RBP17.51■□□□□ 0.39
HVCN1-204ENST00000546425 QSER1Q2KHR3 1735 aa17.51■□□□□ 0.39
HVCN1-204ENST00000546425 PROM2Q8N271 834 aa17.51■□□□□ 0.39
HVCN1-204ENST00000546425 TAF1LQ8IZX4 1826 aa17.5■□□□□ 0.39
HVCN1-204ENST00000546425 ZEB1P37275 1124 aaPredicted RBP17.5■□□□□ 0.39
HVCN1-204ENST00000546425 SCN11AQ9UI33 1791 aa17.49■□□□□ 0.39
HVCN1-204ENST00000546425 NKX1-1Q15270 411 aaPredicted RBP17.49■□□□□ 0.39
HVCN1-204ENST00000546425 DIAPH1O60610 1272 aaKnown RBP17.48■□□□□ 0.39
HVCN1-204ENST00000546425 IFNL2Q8IZJ0 200 aa17.48■□□□□ 0.39
HVCN1-204ENST00000546425 TUBGCP6Q96RT7 1819 aa17.48■□□□□ 0.39
HVCN1-204ENST00000546425 C5P01031 1676 aa17.48■□□□□ 0.39
HVCN1-204ENST00000546425 PHKG2P15735 406 aa17.47■□□□□ 0.39
HVCN1-204ENST00000546425 AMOTQ4VCS5 1084 aa17.47■□□□□ 0.39
HVCN1-204ENST00000546425 PLEKHO1Q53GL0 409 aaPredicted RBP17.47■□□□□ 0.39
HVCN1-204ENST00000546425 SULT6B1Q6IMI4 303 aa17.47■□□□□ 0.39
HVCN1-204ENST00000546425 AEBP1Q8IUX7 1158 aa17.47■□□□□ 0.39
HVCN1-204ENST00000546425 ANO8Q9HCE9 1232 aaPredicted RBP17.46■□□□□ 0.39
HVCN1-204ENST00000546425 SLC27A3Q5K4L6 730 aa17.45■□□□□ 0.38
HVCN1-204ENST00000546425 CFAP53Q96M91 514 aa17.44■□□□□ 0.38
HVCN1-204ENST00000546425 STK32BQ9NY57 414 aa17.44■□□□□ 0.38
HVCN1-204ENST00000546425 HSP90AB1P08238 724 aaKnown RBP17.43■□□□□ 0.38
HVCN1-204ENST00000546425 C1QBPQ07021 282 aaKnown RBP17.43■□□□□ 0.38
HVCN1-204ENST00000546425 ZNF530Q6P9A1 599 aaPredicted RBP17.43■□□□□ 0.38
HVCN1-204ENST00000546425 MPRIPQ6WCQ1 1025 aa17.43■□□□□ 0.38
HVCN1-204ENST00000546425 PPP2R1AP30153 589 aa17.42■□□□□ 0.38
HVCN1-204ENST00000546425 SLC15A2Q16348 729 aa17.42■□□□□ 0.38
HVCN1-204ENST00000546425 LRRC4BQ9NT99 713 aa17.42■□□□□ 0.38
HVCN1-204ENST00000546425 HMOX1P09601 288 aa17.41■□□□□ 0.38
HVCN1-204ENST00000546425 DCAF5Q96JK2 942 aa17.41■□□□□ 0.38
HVCN1-204ENST00000546425 ZNF831Q5JPB2 1677 aa17.41■□□□□ 0.38
HVCN1-204ENST00000546425 ADAMTS7Q9UKP4 1686 aa17.41■□□□□ 0.38
HVCN1-204ENST00000546425 PALLDQ8WX93 1383 aa17.4■□□□□ 0.38
HVCN1-204ENST00000546425 KDM6AO15550 1401 aaPredicted RBP17.4■□□□□ 0.38
HVCN1-204ENST00000546425 C1orf141Q5JVX7 400 aa17.4■□□□□ 0.38
HVCN1-204ENST00000546425 SMARCC1Q92922 1105 aaPredicted RBP17.4■□□□□ 0.38
HVCN1-204ENST00000546425 TMOD3Q9NYL9 352 aa17.4■□□□□ 0.38
HVCN1-204ENST00000546425 CCNL1Q9UK58 526 aaPredicted RBP17.4■□□□□ 0.38
HVCN1-204ENST00000546425 U2SURPO15042 1029 aaKnown RBP17.39■□□□□ 0.37
HVCN1-204ENST00000546425 PIGBQ92521 554 aa17.39■□□□□ 0.37
HVCN1-204ENST00000546425 C4BP0C0L5 1744 aa17.38■□□□□ 0.37
HVCN1-204ENST00000546425 ERVV-2B6SEH9 535 aa17.38■□□□□ 0.37
HVCN1-204ENST00000546425 HMGB2P26583 209 aaKnown RBP17.38■□□□□ 0.37
HVCN1-204ENST00000546425 DDX10Q13206 875 aaKnown RBP17.37■□□□□ 0.37
HVCN1-204ENST00000546425 NUDCQ9Y266 331 aa17.37■□□□□ 0.37
HVCN1-204ENST00000546425 COL24A1Q17RW2 1714 aa17.37■□□□□ 0.37
HVCN1-204ENST00000546425 UBR3Q6ZT12 1888 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms