RNA–Protein interactions for RNA: ENST00000546407.1

CFTR-207, Transcript of cystic fibrosis transmembrane conductance regulator, humanhuman

TSL 1 (best)

Gene CFTR, Length 222 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFTR-207ENST00000546407 TGFB3P10600 412 aa2.39□□□□□ -2.03
CFTR-207ENST00000546407 PAX7P23759 505 aa2.39□□□□□ -2.03
CFTR-207ENST00000546407 ABCD1P33897 745 aa2.39□□□□□ -2.03
CFTR-207ENST00000546407 CASP2P42575 452 aa2.39□□□□□ -2.03
CFTR-207ENST00000546407 CLK1P49759 484 aaKnown RBP2.39□□□□□ -2.03
CFTR-207ENST00000546407 ZNF132P52740 706 aa2.39□□□□□ -2.03
CFTR-207ENST00000546407 NAP1L1P55209 391 aaKnown RBP2.39□□□□□ -2.03
CFTR-207ENST00000546407 UBE4AQ14139 1066 aa2.39□□□□□ -2.03
CFTR-207ENST00000546407 VPS72Q15906 364 aa2.39□□□□□ -2.03
CFTR-207ENST00000546407 NFE2L2Q16236 605 aa2.39□□□□□ -2.03
CFTR-207ENST00000546407 C11orf91Q3C1V1 193 aa2.39□□□□□ -2.03
CFTR-207ENST00000546407 CCDC184Q52MB2 194 aa2.39□□□□□ -2.03
CFTR-207ENST00000546407 SOGA3Q5TF21 947 aa2.39□□□□□ -2.03
CFTR-207ENST00000546407 LARP1BQ659C4 914 aaKnown RBP2.39□□□□□ -2.03
CFTR-207ENST00000546407 DIEXFQ68CQ4 756 aaKnown RBP2.39□□□□□ -2.03
CFTR-207ENST00000546407 IQCEQ6IPM2 695 aa2.39□□□□□ -2.03
CFTR-207ENST00000546407 CC2D1AQ6P1N0 951 aaPredicted RBP2.39□□□□□ -2.03
CFTR-207ENST00000546407 NFXL1Q6ZNB6 911 aa2.39□□□□□ -2.03
CFTR-207ENST00000546407 NT5DC4Q86YG4 428 aa2.39□□□□□ -2.03
CFTR-207ENST00000546407 HSCBQ8IWL3 235 aa2.39□□□□□ -2.03
CFTR-207ENST00000546407 SLF2Q8IX21 1173 aa2.39□□□□□ -2.03
CFTR-207ENST00000546407 IQCF2Q8IXL9 164 aa2.39□□□□□ -2.03
CFTR-207ENST00000546407 NDUFAF2Q8N183 169 aa2.39□□□□□ -2.03
CFTR-207ENST00000546407 NLGN1Q8N2Q7 840 aa2.39□□□□□ -2.03
CFTR-207ENST00000546407 KLHL23Q8NBE8 558 aa2.39□□□□□ -2.03
CFTR-207ENST00000546407 GIPC2Q8TF65 315 aa2.39□□□□□ -2.03
CFTR-207ENST00000546407 FRS2Q8WU20 508 aa2.39□□□□□ -2.03
CFTR-207ENST00000546407 SYAP1Q96A49 352 aaPredicted RBP2.39□□□□□ -2.03
CFTR-207ENST00000546407 POM121Q96HA1 1249 aa2.39□□□□□ -2.03
CFTR-207ENST00000546407 C22orf23Q9BZE7 217 aa2.39□□□□□ -2.03
CFTR-207ENST00000546407 MUC3BQ9H195 1237 aa2.39□□□□□ -2.03
CFTR-207ENST00000546407 PNNQ9H307 717 aaKnown RBP2.39□□□□□ -2.03
CFTR-207ENST00000546407 TSPY26PQ9H489 355 aa2.39□□□□□ -2.03
CFTR-207ENST00000546407 MED4Q9NPJ6 270 aa2.39□□□□□ -2.03
CFTR-207ENST00000546407 SMC4Q9NTJ3 1288 aa2.39□□□□□ -2.03
CFTR-207ENST00000546407 TCEAL9Q9UHQ7 104 aa2.39□□□□□ -2.03
CFTR-207ENST00000546407 PRR12Q9ULL5 1215 aa2.39□□□□□ -2.03
CFTR-207ENST00000546407 ISY1Q9ULR0 285 aaKnown RBP2.39□□□□□ -2.03
CFTR-207ENST00000546407 TBC1D2BQ9UPU7 963 aa2.39□□□□□ -2.03
CFTR-207ENST00000546407 THRAP3Q9Y2W1 955 aaKnown RBP2.39□□□□□ -2.03
CFTR-207ENST00000546407 ZNF330Q9Y3S2 320 aaPredicted RBP2.39□□□□□ -2.03
CFTR-207ENST00000546407 COL4A3BPQ9Y5P4 624 aa2.39□□□□□ -2.03
CFTR-207ENST00000546407 CCDC163A0A0D9SF12 145 aa2.38□□□□□ -2.03
CFTR-207ENST00000546407 IFRD1O00458 451 aaPredicted RBP2.38□□□□□ -2.03
CFTR-207ENST00000546407 CHL1O00533 1208 aa2.38□□□□□ -2.03
CFTR-207ENST00000546407 CCP110O43303 1012 aa2.38□□□□□ -2.03
CFTR-207ENST00000546407 PLIN1O60240 522 aa2.38□□□□□ -2.03
CFTR-207ENST00000546407 MTA2O94776 668 aa2.38□□□□□ -2.03
CFTR-207ENST00000546407 RECKO95980 971 aa2.38□□□□□ -2.03
CFTR-207ENST00000546407 RPN1P04843 607 aaKnown RBP2.38□□□□□ -2.03
CFTR-207ENST00000546407 LDHCP07864 332 aa2.38□□□□□ -2.03
CFTR-207ENST00000546407 PRR29P0C7W0 189 aa2.38□□□□□ -2.03
CFTR-207ENST00000546407 NAT1P18440 290 aa2.38□□□□□ -2.03
CFTR-207ENST00000546407 HSD3B2P26439 372 aa2.38□□□□□ -2.03
CFTR-207ENST00000546407 ERCC5P28715 1186 aaPredicted RBP2.38□□□□□ -2.03
CFTR-207ENST00000546407 MARSP56192 900 aaKnown RBP2.38□□□□□ -2.03
CFTR-207ENST00000546407 WASHC5Q12768 1159 aa2.38□□□□□ -2.03
CFTR-207ENST00000546407 TRDNQ13061 729 aa2.38□□□□□ -2.03
CFTR-207ENST00000546407 POLA2Q14181 598 aa2.38□□□□□ -2.03
CFTR-207ENST00000546407 TSNAXIP1Q2TAA8 658 aa2.38□□□□□ -2.03
CFTR-207ENST00000546407 FILIP1LQ4L180 1135 aa2.38□□□□□ -2.03
CFTR-207ENST00000546407 AMOTQ4VCS5 1084 aa2.38□□□□□ -2.03
CFTR-207ENST00000546407 C16orf87Q6PH81 154 aa2.38□□□□□ -2.03
CFTR-207ENST00000546407 ARHGEF25Q86VW2 580 aa2.38□□□□□ -2.03
CFTR-207ENST00000546407 CHCHD4Q8N4Q1 142 aa2.38□□□□□ -2.03
CFTR-207ENST00000546407 JMYQ8N9B5 988 aa2.38□□□□□ -2.03
CFTR-207ENST00000546407 PIK3R5Q8WYR1 880 aa2.38□□□□□ -2.03
CFTR-207ENST00000546407 CDK5RAP3Q96JB5 506 aa2.38□□□□□ -2.03
CFTR-207ENST00000546407 CDHR1Q96JP9 859 aa2.38□□□□□ -2.03
CFTR-207ENST00000546407 C8orf48Q96LL4 319 aa2.38□□□□□ -2.03
CFTR-207ENST00000546407 TANGO6Q9C0B7 1094 aa2.38□□□□□ -2.03
CFTR-207ENST00000546407 LRRC27Q9C0I9 530 aa2.38□□□□□ -2.03
CFTR-207ENST00000546407 TMX1Q9H3N1 280 aa2.38□□□□□ -2.03
CFTR-207ENST00000546407 VRTNQ9H8Y1 702 aa2.38□□□□□ -2.03
CFTR-207ENST00000546407 BRMS1Q9HCU9 246 aa2.38□□□□□ -2.03
CFTR-207ENST00000546407 PCDH12Q9NPG4 1184 aa2.38□□□□□ -2.03
CFTR-207ENST00000546407 AVENQ9NQS1 362 aaPredicted RBP2.38□□□□□ -2.03
CFTR-207ENST00000546407 TYW1Q9NV66 732 aaKnown RBP2.38□□□□□ -2.03
CFTR-207ENST00000546407 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP2.38□□□□□ -2.03
CFTR-207ENST00000546407 SLAIN2Q9P270 581 aa2.38□□□□□ -2.03
CFTR-207ENST00000546407 KLF15Q9UIH9 416 aa2.38□□□□□ -2.03
CFTR-207ENST00000546407 ASAP1Q9ULH1 1129 aa2.38□□□□□ -2.03
CFTR-207ENST00000546407 ZNF652Q9Y2D9 606 aa2.38□□□□□ -2.03
CFTR-207ENST00000546407 COG6Q9Y2V7 657 aa2.38□□□□□ -2.03
CFTR-207ENST00000546407 CHMP3Q9Y3E7 222 aa2.38□□□□□ -2.03
CFTR-207ENST00000546407 KIF16BQ96L93 1317 aa2.38□□□□□ -2.03
CFTR-207ENST00000546407 DCAF1Q9Y4B6 1507 aa2.37□□□□□ -2.03
CFTR-207ENST00000546407 CCDC196A0A1B0GTZ2 297 aa2.37□□□□□ -2.03
CFTR-207ENST00000546407 TMEM238LA0A1B0GVL6 79 aa2.37□□□□□ -2.03
CFTR-207ENST00000546407 ANKRD18BA2A2Z9 1011 aa2.37□□□□□ -2.03
CFTR-207ENST00000546407 SPDYE2BA6NHP3 402 aa2.37□□□□□ -2.03
CFTR-207ENST00000546407 SPDYE5A6NIY4 337 aa2.37□□□□□ -2.03
CFTR-207ENST00000546407 TMEM110-MUSTN1A8MSY1 372 aa2.37□□□□□ -2.03
CFTR-207ENST00000546407 TRIM37O94972 964 aa2.37□□□□□ -2.03
CFTR-207ENST00000546407 IGHDP01880 384 aa2.37□□□□□ -2.03
CFTR-207ENST00000546407 SPDYE6P0CI01 402 aa2.37□□□□□ -2.03
CFTR-207ENST00000546407 MS4A1P11836 297 aa2.37□□□□□ -2.03
CFTR-207ENST00000546407 ZSCAN20P17040 1043 aaPredicted RBP2.37□□□□□ -2.03
CFTR-207ENST00000546407 PSMA3P25788 255 aa2.37□□□□□ -2.03
CFTR-207ENST00000546407 SRPK2P78362 688 aaKnown RBP2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms