RNA–Protein interactions for RNA: ENST00000546386.1

CCDC38-202, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-202ENST00000546386 SLC4A10Q6U841 1118 aa15.27■□□□□ 0.04
CCDC38-202ENST00000546386 DLG5Q8TDM6 1919 aa15.27■□□□□ 0.03
CCDC38-202ENST00000546386 ANKARQ7Z5J8 1434 aa15.27■□□□□ 0.03
CCDC38-202ENST00000546386 APBB1O00213 710 aa15.27■□□□□ 0.03
CCDC38-202ENST00000546386 ANXA1P04083 346 aa15.27■□□□□ 0.03
CCDC38-202ENST00000546386 G2E3Q7L622 706 aa15.27■□□□□ 0.03
CCDC38-202ENST00000546386 ANKRD24Q8TF21 1146 aa15.27■□□□□ 0.03
CCDC38-202ENST00000546386 IP6K1Q92551 441 aa15.27■□□□□ 0.03
CCDC38-202ENST00000546386 IGSF1Q8N6C5 1336 aa15.26■□□□□ 0.03
CCDC38-202ENST00000546386 SLC4A2P04920 1241 aa15.26■□□□□ 0.03
CCDC38-202ENST00000546386 CSB-PGBD3P0DP91 1061 aa15.26■□□□□ 0.03
CCDC38-202ENST00000546386 EIF2S2P20042 333 aaKnown RBP15.26■□□□□ 0.03
CCDC38-202ENST00000546386 CENPQQ7L2Z9 268 aaPredicted RBP15.26■□□□□ 0.03
CCDC38-202ENST00000546386 C1orf167Q5SNV9 1468 aa15.26■□□□□ 0.03
CCDC38-202ENST00000546386 ZNF142P52746 1687 aaPredicted RBP15.26■□□□□ 0.03
CCDC38-202ENST00000546386 MRPL50Q8N5N7 158 aaKnown RBP15.25■□□□□ 0.03
CCDC38-202ENST00000546386 IL16Q14005 1332 aa15.24■□□□□ 0.03
CCDC38-202ENST00000546386 GNAT3A8MTJ3 354 aa15.24■□□□□ 0.03
CCDC38-202ENST00000546386 HAP1P54257 671 aaPredicted RBP15.24■□□□□ 0.03
CCDC38-202ENST00000546386 LMOD3Q0VAK6 560 aa15.24■□□□□ 0.03
CCDC38-202ENST00000546386 ARHGEF25Q86VW2 580 aa15.24■□□□□ 0.03
CCDC38-202ENST00000546386 STRCP1A6NGW2 1772 aa15.23■□□□□ 0.03
CCDC38-202ENST00000546386 CHL1O00533 1208 aa15.23■□□□□ 0.03
CCDC38-202ENST00000546386 PRAMEF22A3QJZ6 481 aa15.23■□□□□ 0.03
CCDC38-202ENST00000546386 SLC4A3P48751 1232 aa15.22■□□□□ 0.03
CCDC38-202ENST00000546386 ZNF530Q6P9A1 599 aaPredicted RBP15.22■□□□□ 0.03
CCDC38-202ENST00000546386 BRINP3Q76B58 766 aa15.22■□□□□ 0.03
CCDC38-202ENST00000546386 KCNH5Q8NCM2 988 aa15.21■□□□□ 0.03
CCDC38-202ENST00000546386 SLAIN2Q9P270 581 aa15.21■□□□□ 0.03
CCDC38-202ENST00000546386 PDZRN3Q9UPQ7 1066 aa15.21■□□□□ 0.03
CCDC38-202ENST00000546386 PIP4K2AP48426 406 aaPredicted RBP15.21■□□□□ 0.02
CCDC38-202ENST00000546386 CALD1Q05682 793 aaKnown RBP15.21■□□□□ 0.02
CCDC38-202ENST00000546386 CADPS2Q86UW7 1296 aa15.21■□□□□ 0.02
CCDC38-202ENST00000546386 STRN4Q9NRL3 753 aa15.2■□□□□ 0.02
CCDC38-202ENST00000546386 ARHGEF10O15013 1369 aa15.19■□□□□ 0.02
CCDC38-202ENST00000546386 SEC24BO95487 1268 aa15.19■□□□□ 0.02
CCDC38-202ENST00000546386 SLC39A6Q13433 755 aa15.19■□□□□ 0.02
CCDC38-202ENST00000546386 GAS2L2Q8NHY3 880 aa15.19■□□□□ 0.02
CCDC38-202ENST00000546386 BACH2Q9BYV9 841 aa15.19■□□□□ 0.02
CCDC38-202ENST00000546386 MSH6P52701 1360 aa15.19■□□□□ 0.02
CCDC38-202ENST00000546386 IPO8O15397 1037 aaKnown RBP15.19■□□□□ 0.02
CCDC38-202ENST00000546386 RGPD2P0DJD1 1756 aa15.18■□□□□ 0.02
CCDC38-202ENST00000546386 LNPKQ9C0E8 428 aa15.18■□□□□ 0.02
CCDC38-202ENST00000546386 MST1RQ04912 1400 aa15.18■□□□□ 0.02
CCDC38-202ENST00000546386 PHAXQ9H814 394 aaKnown RBP15.18■□□□□ 0.02
CCDC38-202ENST00000546386 ZBTB40Q9NUA8 1239 aa15.18■□□□□ 0.02
CCDC38-202ENST00000546386 EP400Q96L91 3159 aa15.18■□□□□ 0.02
CCDC38-202ENST00000546386 KIF16BQ96L93 1317 aa15.18■□□□□ 0.02
CCDC38-202ENST00000546386 LMTK3Q96Q04 1460 aa15.17■□□□□ 0.02
CCDC38-202ENST00000546386 DDX19BQ9UMR2 479 aa15.17■□□□□ 0.02
CCDC38-202ENST00000546386 KDRP35968 1356 aa15.17■□□□□ 0.02
CCDC38-202ENST00000546386 MARF1Q9Y4F3 1742 aaKnown RBP15.17■□□□□ 0.02
CCDC38-202ENST00000546386 CRB1P82279 1406 aa15.17■□□□□ 0.02
CCDC38-202ENST00000546386 RNF216Q9NWF9 866 aaPredicted RBP15.17■□□□□ 0.02
CCDC38-202ENST00000546386 LTN1O94822 1766 aa15.16■□□□□ 0.02
CCDC38-202ENST00000546386 ZBTB7BO15156 539 aaPredicted RBP15.16■□□□□ 0.02
CCDC38-202ENST00000546386 ALDH1L2Q3SY69 923 aa15.16■□□□□ 0.02
CCDC38-202ENST00000546386 KIAA0232Q92628 1395 aa15.16■□□□□ 0.02
CCDC38-202ENST00000546386 FKBP5Q13451 457 aaPredicted RBP15.15■□□□□ 0.02
CCDC38-202ENST00000546386 TEFQ10587 303 aa15.15■□□□□ 0.02
CCDC38-202ENST00000546386 MEIS3Q99687 375 aa15.15■□□□□ 0.02
CCDC38-202ENST00000546386 RWDD1Q9H446 243 aaPredicted RBP15.15■□□□□ 0.02
CCDC38-202ENST00000546386 NPHP3Q7Z494 1330 aa15.14■□□□□ 0.01
CCDC38-202ENST00000546386 CT47B1P0C2W7 299 aaPredicted RBP15.14■□□□□ 0.01
CCDC38-202ENST00000546386 TAF7Q15545 349 aaPredicted RBP15.14■□□□□ 0.01
CCDC38-202ENST00000546386 SIRT2Q8IXJ6 389 aa15.14■□□□□ 0.01
CCDC38-202ENST00000546386 PRDM11Q9NQV5 511 aa15.14■□□□□ 0.01
CCDC38-202ENST00000546386 ERBB3P21860 1342 aa15.14■□□□□ 0.01
CCDC38-202ENST00000546386 C8orf34Q49A92 452 aa15.14■□□□□ 0.01
CCDC38-202ENST00000546386 C1orf141Q5JVX7 400 aa15.14■□□□□ 0.01
CCDC38-202ENST00000546386 MAP3K5Q99683 1374 aa15.13■□□□□ 0.01
CCDC38-202ENST00000546386 BTBD11A6QL63 1104 aa15.13■□□□□ 0.01
CCDC38-202ENST00000546386 ANKRD45Q5TZF3 282 aa15.13■□□□□ 0.01
CCDC38-202ENST00000546386 NWD1Q149M9 1564 aa15.13■□□□□ 0.01
CCDC38-202ENST00000546386 NFAT5O94916 1531 aa15.13■□□□□ 0.01
CCDC38-202ENST00000546386 PXDNQ92626 1479 aa15.13■□□□□ 0.01
CCDC38-202ENST00000546386 PIP4K2BP78356 416 aa15.12■□□□□ 0.01
CCDC38-202ENST00000546386 NFATC2IPQ8NCF5 419 aa15.12■□□□□ 0.01
CCDC38-202ENST00000546386 KAT6BQ8WYB5 2073 aa15.12■□□□□ 0.01
CCDC38-202ENST00000546386 AIMP1Q12904 312 aaKnown RBP15.12■□□□□ 0.01
CCDC38-202ENST00000546386 DDX54Q8TDD1 881 aaKnown RBP15.12■□□□□ 0.01
CCDC38-202ENST00000546386 RAPGEF4Q8WZA2 1011 aa15.12■□□□□ 0.01
CCDC38-202ENST00000546386 HDGFL1Q5TGJ6 251 aa15.11■□□□□ 0.01
CCDC38-202ENST00000546386 C16orf71Q8IYS4 520 aaPredicted RBP15.11■□□□□ 0.01
CCDC38-202ENST00000546386 RGPD5Q99666 1765 aa15.11■□□□□ 0.01
CCDC38-202ENST00000546386 RGPD1P0DJD0 1748 aa15.11■□□□□ 0.01
CCDC38-202ENST00000546386 ANP32AP39687 249 aaKnown RBP15.11■□□□□ 0.01
CCDC38-202ENST00000546386 TOM1L2Q6ZVM7 507 aa15.11■□□□□ 0.01
CCDC38-202ENST00000546386 CHPF2Q9P2E5 772 aa15.11■□□□□ 0.01
CCDC38-202ENST00000546386 SRCAPQ6ZRS2 3230 aa15.1■□□□□ 0.01
CCDC38-202ENST00000546386 USP19O94966 1318 aa15.1■□□□□ 0.01
CCDC38-202ENST00000546386 A0A0G2JS52 829 aa15.1■□□□□ 0.01
CCDC38-202ENST00000546386 SMARCA5O60264 1052 aaPredicted RBP15.1■□□□□ 0.01
CCDC38-202ENST00000546386 PROSER3Q2NL68 480 aa15.1■□□□□ 0.01
CCDC38-202ENST00000546386 PLEKHO1Q53GL0 409 aaPredicted RBP15.1■□□□□ 0.01
CCDC38-202ENST00000546386 SPATA31A3Q5VYP0 1347 aa15.1■□□□□ 0.01
CCDC38-202ENST00000546386 STK31Q9BXU1 1019 aa15.1■□□□□ 0.01
CCDC38-202ENST00000546386 FLIIQ13045 1269 aa15.09■□□□□ 0.01
CCDC38-202ENST00000546386 ERICH6Q7L0X2 663 aa15.09■□□□□ 0.01
CCDC38-202ENST00000546386 MED1Q15648 1581 aaPredicted RBP15.08■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms