RNA–Protein interactions for RNA: ENST00000546345.5

CCDC60-205, Transcript of coiled-coil domain containing 60, humanhuman

TSL 1 (best)

Gene CCDC60, Length 865 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-205ENST00000546345 NUDT18Q6ZVK8 323 aa10.54□□□□□ -0.72
CCDC60-205ENST00000546345 C14orf37Q86TY3 774 aa10.54□□□□□ -0.72
CCDC60-205ENST00000546345 ADGRG1Q9Y653 693 aa10.54□□□□□ -0.72
CCDC60-205ENST00000546345 KANK1Q14678 1352 aa10.53□□□□□ -0.72
CCDC60-205ENST00000546345 RGPD1P0DJD0 1748 aa10.53□□□□□ -0.72
CCDC60-205ENST00000546345 FAM161AQ3B820 660 aa10.53□□□□□ -0.72
CCDC60-205ENST00000546345 RBM46Q8TBY0 533 aaKnown RBP10.53□□□□□ -0.72
CCDC60-205ENST00000546345 NGLY1Q96IV0 654 aa10.53□□□□□ -0.72
CCDC60-205ENST00000546345 ADAMTS2O95450 1211 aa10.52□□□□□ -0.73
CCDC60-205ENST00000546345 PRKCSHP14314 528 aaPredicted RBP10.52□□□□□ -0.73
CCDC60-205ENST00000546345 SLC24A3Q9HC58 644 aa10.52□□□□□ -0.73
CCDC60-205ENST00000546345 USP32Q8NFA0 1604 aa10.51□□□□□ -0.73
CCDC60-205ENST00000546345 C1orf167Q5SNV9 1468 aa10.51□□□□□ -0.73
CCDC60-205ENST00000546345 NWD2Q9ULI1 1742 aa10.51□□□□□ -0.73
CCDC60-205ENST00000546345 C3orf80F5H4A9 247 aa10.51□□□□□ -0.73
CCDC60-205ENST00000546345 SMAPO00193 183 aa10.51□□□□□ -0.73
CCDC60-205ENST00000546345 FNBP4Q8N3X1 1017 aaPredicted RBP10.51□□□□□ -0.73
CCDC60-205ENST00000546345 MRPL50Q8N5N7 158 aaKnown RBP10.51□□□□□ -0.73
CCDC60-205ENST00000546345 LRRC59Q96AG4 307 aaKnown RBP10.51□□□□□ -0.73
CCDC60-205ENST00000546345 AK7Q96M32 723 aa10.51□□□□□ -0.73
CCDC60-205ENST00000546345 SEPT9Q9UHD8 586 aaPredicted RBP10.51□□□□□ -0.73
CCDC60-205ENST00000546345 NRAPQ86VF7 1730 aa10.5□□□□□ -0.73
CCDC60-205ENST00000546345 ADGRL2O95490 1459 aa10.5□□□□□ -0.73
CCDC60-205ENST00000546345 RALGAPBQ86X10 1494 aa10.5□□□□□ -0.73
CCDC60-205ENST00000546345 DEFB132Q7Z7B7 95 aa10.5□□□□□ -0.73
CCDC60-205ENST00000546345 LAPTM4BQ86VI4 370 aa10.5□□□□□ -0.73
CCDC60-205ENST00000546345 CCDC125Q86Z20 511 aa10.5□□□□□ -0.73
CCDC60-205ENST00000546345 CCDC102AQ96A19 550 aa10.5□□□□□ -0.73
CCDC60-205ENST00000546345 EYA1Q99502 592 aa10.5□□□□□ -0.73
CCDC60-205ENST00000546345 SLC52A1Q9NWF4 448 aa10.5□□□□□ -0.73
CCDC60-205ENST00000546345 USP21Q9UK80 565 aa10.5□□□□□ -0.73
CCDC60-205ENST00000546345 TRPC5Q9UL62 973 aaPredicted RBP10.5□□□□□ -0.73
CCDC60-205ENST00000546345 PXDNQ92626 1479 aa10.49□□□□□ -0.73
CCDC60-205ENST00000546345 RRP7BPQ9NSQ0 103 aa10.49□□□□□ -0.73
CCDC60-205ENST00000546345 RREB1Q92766 1687 aa10.48□□□□□ -0.73
CCDC60-205ENST00000546345 CAMTA1Q9Y6Y1 1673 aa10.48□□□□□ -0.73
CCDC60-205ENST00000546345 GOLGA8CPA6NN73 597 aa10.48□□□□□ -0.73
CCDC60-205ENST00000546345 PPP1R15AO75807 674 aaPredicted RBP10.48□□□□□ -0.73
CCDC60-205ENST00000546345 FAM98CQ17RN3 349 aaKnown RBP10.48□□□□□ -0.73
CCDC60-205ENST00000546345 METTL3Q86U44 580 aaKnown RBP10.48□□□□□ -0.73
CCDC60-205ENST00000546345 PXYLP1Q8TE99 480 aa10.48□□□□□ -0.73
CCDC60-205ENST00000546345 SOS2Q07890 1332 aaPredicted RBP10.48□□□□□ -0.73
CCDC60-205ENST00000546345 SLIT2O94813 1529 aa10.48□□□□□ -0.73
CCDC60-205ENST00000546345 NUP188Q5SRE5 1749 aa10.47□□□□□ -0.73
CCDC60-205ENST00000546345 AMOTL2Q9Y2J4 779 aa10.47□□□□□ -0.73
CCDC60-205ENST00000546345 NEXMIFQ5QGS0 1516 aa10.47□□□□□ -0.73
CCDC60-205ENST00000546345 METP08581 1390 aa10.46□□□□□ -0.74
CCDC60-205ENST00000546345 CDC42BPGQ6DT37 1551 aa10.46□□□□□ -0.74
CCDC60-205ENST00000546345 HRCP23327 699 aa10.45□□□□□ -0.74
CCDC60-205ENST00000546345 HDGFP51858 240 aaKnown RBP10.45□□□□□ -0.74
CCDC60-205ENST00000546345 RGPD8O14715 1765 aaPredicted RBP10.44□□□□□ -0.74
CCDC60-205ENST00000546345 PRAG1Q86YV5 1406 aa10.44□□□□□ -0.74
CCDC60-205ENST00000546345 VPS8Q8N3P4 1428 aa10.44□□□□□ -0.74
CCDC60-205ENST00000546345 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.44□□□□□ -0.74
CCDC60-205ENST00000546345 RCCD1A6NED2 376 aa10.44□□□□□ -0.74
CCDC60-205ENST00000546345 DNAJB2P25686 324 aa10.44□□□□□ -0.74
CCDC60-205ENST00000546345 ZFRQ96KR1 1074 aaKnown RBP10.44□□□□□ -0.74
CCDC60-205ENST00000546345 CLTCL1P53675 1640 aa10.44□□□□□ -0.74
CCDC60-205ENST00000546345 TRIM66O15016 1216 aa10.43□□□□□ -0.74
CCDC60-205ENST00000546345 KANK4Q5T7N3 995 aaPredicted RBP10.43□□□□□ -0.74
CCDC60-205ENST00000546345 SPNS2Q8IVW8 549 aa10.43□□□□□ -0.74
CCDC60-205ENST00000546345 KIF1BO60333 1816 aa10.42□□□□□ -0.74
CCDC60-205ENST00000546345 ANKRD30AQ9BXX3 1397 aa10.42□□□□□ -0.74
CCDC60-205ENST00000546345 FMN2Q9NZ56 1722 aa10.42□□□□□ -0.74
CCDC60-205ENST00000546345 THSD7AQ9UPZ6 1657 aa10.42□□□□□ -0.74
CCDC60-205ENST00000546345 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.42□□□□□ -0.74
CCDC60-205ENST00000546345 GJD4Q96KN9 370 aaPredicted RBP10.42□□□□□ -0.74
CCDC60-205ENST00000546345 PHOX2BQ99453 314 aa10.42□□□□□ -0.74
CCDC60-205ENST00000546345 KIF1AQ12756 1690 aa10.41□□□□□ -0.74
CCDC60-205ENST00000546345 IFT172Q9UG01 1749 aa10.41□□□□□ -0.74
CCDC60-205ENST00000546345 CRYBG1Q9Y4K1 1723 aa10.41□□□□□ -0.74
CCDC60-205ENST00000546345 CHD4Q14839 1912 aa10.41□□□□□ -0.74
CCDC60-205ENST00000546345 PPLO60437 1756 aa10.4□□□□□ -0.74
CCDC60-205ENST00000546345 ANKK1Q8NFD2 765 aa10.4□□□□□ -0.74
CCDC60-205ENST00000546345 WNT2BQ93097 391 aa10.4□□□□□ -0.74
CCDC60-205ENST00000546345 ORAI2Q96SN7 254 aa10.4□□□□□ -0.74
CCDC60-205ENST00000546345 TMEM134Q9H6X4 195 aa10.4□□□□□ -0.74
CCDC60-205ENST00000546345 ANKRD50Q9ULJ7 1429 aa10.4□□□□□ -0.75
CCDC60-205ENST00000546345 SAMD7Q7Z3H4 446 aa10.39□□□□□ -0.75
CCDC60-205ENST00000546345 NLRP7Q8WX94 980 aa10.39□□□□□ -0.75
CCDC60-205ENST00000546345 DISP2A7MBM2 1401 aa10.39□□□□□ -0.75
CCDC60-205ENST00000546345 ADGRB2O60241 1585 aa10.39□□□□□ -0.75
CCDC60-205ENST00000546345 ROBO2Q9HCK4 1378 aa10.39□□□□□ -0.75
CCDC60-205ENST00000546345 KNDC1Q76NI1 1749 aa10.38□□□□□ -0.75
CCDC60-205ENST00000546345 MDM2Q00987 491 aaPredicted RBP10.38□□□□□ -0.75
CCDC60-205ENST00000546345 AMHR2Q16671 573 aa10.38□□□□□ -0.75
CCDC60-205ENST00000546345 SWT1Q5T5J6 900 aaKnown RBP10.38□□□□□ -0.75
CCDC60-205ENST00000546345 DAXXQ9UER7 740 aaPredicted RBP10.38□□□□□ -0.75
CCDC60-205ENST00000546345 YY1P25490 414 aa10.37□□□□□ -0.75
CCDC60-205ENST00000546345 SLC4A3P48751 1232 aa10.37□□□□□ -0.75
CCDC60-205ENST00000546345 PDE4DQ08499 809 aa10.37□□□□□ -0.75
CCDC60-205ENST00000546345 KCTD12Q96CX2 325 aaKnown RBP10.37□□□□□ -0.75
CCDC60-205ENST00000546345 LRCH3Q96II8 777 aa10.37□□□□□ -0.75
CCDC60-205ENST00000546345 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.37□□□□□ -0.75
CCDC60-205ENST00000546345 CLCN1P35523 988 aa10.36□□□□□ -0.75
CCDC60-205ENST00000546345 CHIC2Q9UKJ5 165 aa10.36□□□□□ -0.75
CCDC60-205ENST00000546345 CASZ1Q86V15 1759 aa10.36□□□□□ -0.75
CCDC60-205ENST00000546345 SOWAHBA6NEL2 793 aa10.35□□□□□ -0.75
CCDC60-205ENST00000546345 TTLL12Q14166 644 aaPredicted RBP10.35□□□□□ -0.75
CCDC60-205ENST00000546345 GPCPD1Q9NPB8 672 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms