RNA–Protein interactions for RNA: ENST00000546276.5

NPC1L1-204, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 4,826 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-204ENST00000546276 XBP1P17861 261 aa14.47□□□□□ -0.09
NPC1L1-204ENST00000546276 DCTN1Q14203 1278 aa14.47□□□□□ -0.09
NPC1L1-204ENST00000546276 KRT32Q14532 448 aa14.47□□□□□ -0.09
NPC1L1-204ENST00000546276 RNF123Q5XPI4 1314 aa14.47□□□□□ -0.09
NPC1L1-204ENST00000546276 FAM69CQ0P6D2 419 aa14.47□□□□□ -0.09
NPC1L1-204ENST00000546276 KIF1BPQ96EK5 621 aa14.47□□□□□ -0.09
NPC1L1-204ENST00000546276 SIL1Q9H173 461 aa14.47□□□□□ -0.09
NPC1L1-204ENST00000546276 RAB11FIP3O75154 756 aa14.46□□□□□ -0.09
NPC1L1-204ENST00000546276 FILIP1Q7Z7B0 1213 aa14.46□□□□□ -0.09
NPC1L1-204ENST00000546276 CCDC83Q8IWF9 413 aa14.46□□□□□ -0.09
NPC1L1-204ENST00000546276 UBE2Q2Q8WVN8 375 aa14.46□□□□□ -0.09
NPC1L1-204ENST00000546276 SNX21Q969T3 373 aa14.46□□□□□ -0.09
NPC1L1-204ENST00000546276 BRMS1Q9HCU9 246 aa14.46□□□□□ -0.09
NPC1L1-204ENST00000546276 NUP160Q12769 1436 aa14.46□□□□□ -0.09
NPC1L1-204ENST00000546276 MCM10Q7L590 875 aa14.46□□□□□ -0.09
NPC1L1-204ENST00000546276 AMOTL1Q8IY63 956 aa14.46□□□□□ -0.09
NPC1L1-204ENST00000546276 USP25Q9UHP3 1055 aa14.46□□□□□ -0.1
NPC1L1-204ENST00000546276 GRIN2AQ12879 1464 aa14.46□□□□□ -0.1
NPC1L1-204ENST00000546276 FILIP1LQ4L180 1135 aa14.45□□□□□ -0.1
NPC1L1-204ENST00000546276 VPS53Q5VIR6 699 aa14.45□□□□□ -0.1
NPC1L1-204ENST00000546276 GLRX3O76003 335 aaKnown RBP14.45□□□□□ -0.1
NPC1L1-204ENST00000546276 PDE4CQ08493 712 aa14.45□□□□□ -0.1
NPC1L1-204ENST00000546276 ZSCAN23Q3MJ62 389 aa14.45□□□□□ -0.1
NPC1L1-204ENST00000546276 TTC22Q5TAA0 569 aa14.45□□□□□ -0.1
NPC1L1-204ENST00000546276 FERMT3Q86UX7 667 aa14.45□□□□□ -0.1
NPC1L1-204ENST00000546276 SMARCE1Q969G3 411 aa14.45□□□□□ -0.1
NPC1L1-204ENST00000546276 SH2B1Q9NRF2 756 aaPredicted RBP14.45□□□□□ -0.1
NPC1L1-204ENST00000546276 CCDC61Q9Y6R9 512 aa14.45□□□□□ -0.1
NPC1L1-204ENST00000546276 EVA1CP58658 441 aa14.44□□□□□ -0.1
NPC1L1-204ENST00000546276 SART3Q15020 963 aaKnown RBP14.44□□□□□ -0.1
NPC1L1-204ENST00000546276 CAMK4Q16566 473 aa14.44□□□□□ -0.1
NPC1L1-204ENST00000546276 KDM4AO75164 1064 aa14.44□□□□□ -0.1
NPC1L1-204ENST00000546276 TTLL5Q6EMB2 1281 aa14.44□□□□□ -0.1
NPC1L1-204ENST00000546276 SCAND2PQ9GZW5 306 aaPredicted RBP14.44□□□□□ -0.1
NPC1L1-204ENST00000546276 MIS18AQ9NYP9 233 aa14.44□□□□□ -0.1
NPC1L1-204ENST00000546276 TBC1D2BQ9UPU7 963 aa14.44□□□□□ -0.1
NPC1L1-204ENST00000546276 CBFA2T2O43439 604 aa14.44□□□□□ -0.1
NPC1L1-204ENST00000546276 TMX4Q9H1E5 349 aaPredicted RBP14.44□□□□□ -0.1
NPC1L1-204ENST00000546276 ATP2B1P20020 1258 aa14.43□□□□□ -0.1
NPC1L1-204ENST00000546276 ZNF530Q6P9A1 599 aaPredicted RBP14.43□□□□□ -0.1
NPC1L1-204ENST00000546276 VPS37DQ86XT2 251 aa14.43□□□□□ -0.1
NPC1L1-204ENST00000546276 CAGE1Q8TC20 777 aa14.43□□□□□ -0.1
NPC1L1-204ENST00000546276 NUDT16Q96DE0 195 aaKnown RBP14.43□□□□□ -0.1
NPC1L1-204ENST00000546276 RBM27Q9P2N5 1060 aaKnown RBP14.43□□□□□ -0.1
NPC1L1-204ENST00000546276 PRPF40BQ6NWY9 871 aaKnown RBP14.43□□□□□ -0.1
NPC1L1-204ENST00000546276 ARHGAP45Q92619 1136 aa14.43□□□□□ -0.1
NPC1L1-204ENST00000546276 LIMCH1Q9UPQ0 1083 aa14.43□□□□□ -0.1
NPC1L1-204ENST00000546276 TESK2Q96S53 571 aa14.43□□□□□ -0.1
NPC1L1-204ENST00000546276 PTPRCP08575 1304 aa14.43□□□□□ -0.1
NPC1L1-204ENST00000546276 NOL10Q9BSC4 688 aaKnown RBP14.43□□□□□ -0.1
NPC1L1-204ENST00000546276 URB2Q14146 1524 aaKnown RBP14.42□□□□□ -0.1
NPC1L1-204ENST00000546276 LEKR1Q6ZMV7 388 aa14.42□□□□□ -0.1
NPC1L1-204ENST00000546276 EMILIN1Q9Y6C2 1016 aa14.42□□□□□ -0.1
NPC1L1-204ENST00000546276 KIF2AO00139 706 aaPredicted RBP14.42□□□□□ -0.1
NPC1L1-204ENST00000546276 DYNC1I1O14576 645 aa14.42□□□□□ -0.1
NPC1L1-204ENST00000546276 NAP1L1P55209 391 aaKnown RBP14.42□□□□□ -0.1
NPC1L1-204ENST00000546276 LRSAM1Q6UWE0 723 aa14.42□□□□□ -0.1
NPC1L1-204ENST00000546276 GNAT3A8MTJ3 354 aa14.41□□□□□ -0.1
NPC1L1-204ENST00000546276 GDPD2Q9HCC8 539 aa14.41□□□□□ -0.1
NPC1L1-204ENST00000546276 POLR3AO14802 1390 aaPredicted RBP14.41□□□□□ -0.1
NPC1L1-204ENST00000546276 UVSSAQ2YD98 709 aa14.41□□□□□ -0.1
NPC1L1-204ENST00000546276 CCDC158Q5M9N0 1113 aa14.41□□□□□ -0.1
NPC1L1-204ENST00000546276 DACH1Q9UI36 760 aa14.41□□□□□ -0.1
NPC1L1-204ENST00000546276 PIK3C2GO75747 1445 aa14.41□□□□□ -0.1
NPC1L1-204ENST00000546276 F6X3S4 739 aa14.41□□□□□ -0.1
NPC1L1-204ENST00000546276 PER1O15534 1290 aaPredicted RBP14.41□□□□□ -0.1
NPC1L1-204ENST00000546276 SEC24BO95487 1268 aa14.41□□□□□ -0.1
NPC1L1-204ENST00000546276 CBX1P83916 185 aa14.41□□□□□ -0.1
NPC1L1-204ENST00000546276 C14orf93Q9H972 538 aaKnown RBP14.41□□□□□ -0.1
NPC1L1-204ENST00000546276 NOS1P29475 1434 aa14.41□□□□□ -0.1
NPC1L1-204ENST00000546276 ADCY5O95622 1261 aa14.4□□□□□ -0.1
NPC1L1-204ENST00000546276 PTPN14Q15678 1187 aa14.4□□□□□ -0.1
NPC1L1-204ENST00000546276 SMC5Q8IY18 1101 aa14.4□□□□□ -0.1
NPC1L1-204ENST00000546276 ANKRD36BQ8N2N9 1353 aa14.4□□□□□ -0.1
NPC1L1-204ENST00000546276 ARHGEF12Q9NZN5 1544 aa14.4□□□□□ -0.1
NPC1L1-204ENST00000546276 KDM2BQ8NHM5 1336 aa14.4□□□□□ -0.1
NPC1L1-204ENST00000546276 RLBP1P12271 317 aa14.4□□□□□ -0.1
NPC1L1-204ENST00000546276 PIP4K2AP48426 406 aaPredicted RBP14.4□□□□□ -0.1
NPC1L1-204ENST00000546276 PRDM10Q9NQV6 1147 aa14.4□□□□□ -0.1
NPC1L1-204ENST00000546276 MBIPQ9NS73 344 aa14.4□□□□□ -0.1
NPC1L1-204ENST00000546276 CDR1P51861 262 aa14.4□□□□□ -0.1
NPC1L1-204ENST00000546276 NME9Q86XW9 330 aa14.4□□□□□ -0.1
NPC1L1-204ENST00000546276 SMTNL1A8MU46 457 aa14.4□□□□□ -0.1
NPC1L1-204ENST00000546276 TTC39AQ5SRH9 613 aa14.4□□□□□ -0.1
NPC1L1-204ENST00000546276 PPFIBP1Q86W92 1011 aa14.4□□□□□ -0.1
NPC1L1-204ENST00000546276 DDX11Q96FC9 970 aa14.4□□□□□ -0.1
NPC1L1-204ENST00000546276 BRPF1P55201 1214 aaPredicted RBP14.39□□□□□ -0.11
NPC1L1-204ENST00000546276 RAB3GAP1Q15042 981 aa14.39□□□□□ -0.11
NPC1L1-204ENST00000546276 G3V3G9 751 aa14.39□□□□□ -0.11
NPC1L1-204ENST00000546276 DCAF8Q5TAQ9 597 aa14.39□□□□□ -0.11
NPC1L1-204ENST00000546276 TNNQ9UQP3 1299 aa14.39□□□□□ -0.11
NPC1L1-204ENST00000546276 RAPGEF3O95398 923 aa14.39□□□□□ -0.11
NPC1L1-204ENST00000546276 FAM177A1Q8N128 213 aaPredicted RBP14.39□□□□□ -0.11
NPC1L1-204ENST00000546276 STX6O43752 255 aa14.38□□□□□ -0.11
NPC1L1-204ENST00000546276 WAPLQ7Z5K2 1190 aa14.38□□□□□ -0.11
NPC1L1-204ENST00000546276 TMX3Q96JJ7 454 aa14.38□□□□□ -0.11
NPC1L1-204ENST00000546276 PRIMPOLQ96LW4 560 aa14.38□□□□□ -0.11
NPC1L1-204ENST00000546276 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.38□□□□□ -0.11
NPC1L1-204ENST00000546276 LRRFIP2Q9Y608 721 aaKnown RBP14.38□□□□□ -0.11
NPC1L1-204ENST00000546276 UBXN4Q92575 508 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms