RNA–Protein interactions for RNA: ENST00000546084.5

TRAF1-203, Transcript of TNF receptor associated factor 1, humanhuman

TSL 2 BASIC

Gene TRAF1, Length 3,715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-203ENST00000546084 LAMC1P11047 1609 aa11.92□□□□□ -0.5
TRAF1-203ENST00000546084 ZBTB7BO15156 539 aaPredicted RBP11.92□□□□□ -0.5
TRAF1-203ENST00000546084 FIBPO43427 364 aa11.92□□□□□ -0.5
TRAF1-203ENST00000546084 GNAI2P04899 355 aa11.92□□□□□ -0.5
TRAF1-203ENST00000546084 CDK11BP21127 795 aaKnown RBP11.92□□□□□ -0.5
TRAF1-203ENST00000546084 HSP90B1P14625 803 aaKnown RBP11.91□□□□□ -0.5
TRAF1-203ENST00000546084 TAF7Q15545 349 aaPredicted RBP11.91□□□□□ -0.5
TRAF1-203ENST00000546084 ZNF530Q6P9A1 599 aaPredicted RBP11.91□□□□□ -0.5
TRAF1-203ENST00000546084 FERMT3Q86UX7 667 aa11.91□□□□□ -0.5
TRAF1-203ENST00000546084 CPA1P15085 419 aa11.91□□□□□ -0.5
TRAF1-203ENST00000546084 CEBPZQ03701 1054 aaKnown RBP11.91□□□□□ -0.5
TRAF1-203ENST00000546084 PKP1Q13835 747 aa11.91□□□□□ -0.5
TRAF1-203ENST00000546084 IFT57Q9NWB7 429 aa11.91□□□□□ -0.5
TRAF1-203ENST00000546084 KDM5AP29375 1690 aaKnown RBP11.91□□□□□ -0.5
TRAF1-203ENST00000546084 NLRP1Q9C000 1473 aa11.91□□□□□ -0.5
TRAF1-203ENST00000546084 MADDQ8WXG6 1647 aa11.91□□□□□ -0.5
TRAF1-203ENST00000546084 ATP7AQ04656 1500 aa11.9□□□□□ -0.5
TRAF1-203ENST00000546084 FAM177BA6PVY3 158 aa11.9□□□□□ -0.5
TRAF1-203ENST00000546084 PTMSP20962 102 aa11.9□□□□□ -0.5
TRAF1-203ENST00000546084 DRC7Q8IY82 874 aa11.9□□□□□ -0.5
TRAF1-203ENST00000546084 PHF23Q9BUL5 403 aaPredicted RBP11.9□□□□□ -0.5
TRAF1-203ENST00000546084 CIZ1Q9ULV3 898 aaPredicted RBP11.9□□□□□ -0.5
TRAF1-203ENST00000546084 PHAXQ9H814 394 aaKnown RBP11.9□□□□□ -0.5
TRAF1-203ENST00000546084 IFIT2P09913 472 aaKnown RBP11.9□□□□□ -0.5
TRAF1-203ENST00000546084 BMP2KLQ5H9B9 411 aa11.9□□□□□ -0.5
TRAF1-203ENST00000546084 STK11IPQ8N1F8 1099 aa11.9□□□□□ -0.5
TRAF1-203ENST00000546084 ISY1Q9ULR0 285 aaKnown RBP11.89□□□□□ -0.51
TRAF1-203ENST00000546084 SYCE3A1L190 88 aa11.89□□□□□ -0.51
TRAF1-203ENST00000546084 RBM25P49756 843 aaKnown RBP11.89□□□□□ -0.51
TRAF1-203ENST00000546084 RAB3GAP1Q15042 981 aa11.89□□□□□ -0.51
TRAF1-203ENST00000546084 NEUROD6Q96NK8 337 aa11.89□□□□□ -0.51
TRAF1-203ENST00000546084 PLEKHF1Q96S99 279 aa11.89□□□□□ -0.51
TRAF1-203ENST00000546084 LRRCC1Q9C099 1032 aa11.89□□□□□ -0.51
TRAF1-203ENST00000546084 PPIP5K1Q6PFW1 1433 aa11.89□□□□□ -0.51
TRAF1-203ENST00000546084 CCDC30Q5VVM6 783 aa11.89□□□□□ -0.51
TRAF1-203ENST00000546084 SNX21Q969T3 373 aa11.89□□□□□ -0.51
TRAF1-203ENST00000546084 SYTL4Q96C24 671 aaPredicted RBP11.89□□□□□ -0.51
TRAF1-203ENST00000546084 ERBB4Q15303 1308 aa11.89□□□□□ -0.51
TRAF1-203ENST00000546084 FLIIQ13045 1269 aa11.88□□□□□ -0.51
TRAF1-203ENST00000546084 RIC3Q7Z5B4 369 aa11.88□□□□□ -0.51
TRAF1-203ENST00000546084 RRP9O43818 475 aaKnown RBP11.88□□□□□ -0.51
TRAF1-203ENST00000546084 SLC39A6Q13433 755 aa11.88□□□□□ -0.51
TRAF1-203ENST00000546084 CCDC8Q9H0W5 538 aaPredicted RBP11.88□□□□□ -0.51
TRAF1-203ENST00000546084 FAM13BQ9NYF5 915 aa11.88□□□□□ -0.51
TRAF1-203ENST00000546084 ERC2O15083 957 aa11.87□□□□□ -0.51
TRAF1-203ENST00000546084 IL13P35225 146 aa11.87□□□□□ -0.51
TRAF1-203ENST00000546084 ALDH1L2Q3SY69 923 aa11.87□□□□□ -0.51
TRAF1-203ENST00000546084 DNAJC2Q99543 621 aaKnown RBP11.87□□□□□ -0.51
TRAF1-203ENST00000546084 ZNF692Q9BU19 519 aaPredicted RBP11.87□□□□□ -0.51
TRAF1-203ENST00000546084 PA2G4Q9UQ80 394 aaKnown RBP11.87□□□□□ -0.51
TRAF1-203ENST00000546084 TTC21BQ7Z4L5 1316 aa11.87□□□□□ -0.51
TRAF1-203ENST00000546084 PI4KAP2A4QPH2 592 aa11.87□□□□□ -0.51
TRAF1-203ENST00000546084 TRPM2O94759 1503 aa11.87□□□□□ -0.51
TRAF1-203ENST00000546084 CCDC173Q0VFZ6 552 aa11.87□□□□□ -0.51
TRAF1-203ENST00000546084 PLEKHM2Q8IWE5 1019 aa11.87□□□□□ -0.51
TRAF1-203ENST00000546084 PI4KAP1Q8N8J0 262 aa11.87□□□□□ -0.51
TRAF1-203ENST00000546084 CHMP4CQ96CF2 233 aa11.87□□□□□ -0.51
TRAF1-203ENST00000546084 EYA1Q99502 592 aa11.87□□□□□ -0.51
TRAF1-203ENST00000546084 R3HCC1Q9Y3T6 440 aaKnown RBP11.87□□□□□ -0.51
TRAF1-203ENST00000546084 BAG4O95429 457 aaKnown RBP11.87□□□□□ -0.51
TRAF1-203ENST00000546084 ZNF518AQ6AHZ1 1483 aa11.86□□□□□ -0.51
TRAF1-203ENST00000546084 MAP3K19Q56UN5 1328 aa11.86□□□□□ -0.51
TRAF1-203ENST00000546084 GORABQ5T7V8 394 aa11.86□□□□□ -0.51
TRAF1-203ENST00000546084 SIRT2Q8IXJ6 389 aa11.86□□□□□ -0.51
TRAF1-203ENST00000546084 CABLES1Q8TDN4 633 aa11.86□□□□□ -0.51
TRAF1-203ENST00000546084 CLTCL1P53675 1640 aa11.86□□□□□ -0.51
TRAF1-203ENST00000546084 YTHDC2Q9H6S0 1430 aaKnown RBP11.86□□□□□ -0.51
TRAF1-203ENST00000546084 CHRNA2Q15822 529 aa11.86□□□□□ -0.51
TRAF1-203ENST00000546084 DDX17Q92841 729 aaKnown RBP11.86□□□□□ -0.51
TRAF1-203ENST00000546084 GNAT3A8MTJ3 354 aa11.85□□□□□ -0.51
TRAF1-203ENST00000546084 SRCIN1Q9C0H9 1055 aa11.85□□□□□ -0.51
TRAF1-203ENST00000546084 NDUFB9Q9Y6M9 179 aa11.85□□□□□ -0.51
TRAF1-203ENST00000546084 PLXNC1O60486 1568 aa11.85□□□□□ -0.51
TRAF1-203ENST00000546084 PNMA6EA0A0J9YXQ4 647 aa11.85□□□□□ -0.51
TRAF1-203ENST00000546084 BTBD11A6QL63 1104 aa11.85□□□□□ -0.51
TRAF1-203ENST00000546084 PTCD1O75127 700 aaKnown RBP11.85□□□□□ -0.51
TRAF1-203ENST00000546084 MX1P20591 662 aa11.85□□□□□ -0.51
TRAF1-203ENST00000546084 LTKP29376 864 aa11.85□□□□□ -0.51
TRAF1-203ENST00000546084 NUCB2P80303 420 aa11.85□□□□□ -0.51
TRAF1-203ENST00000546084 BOLA2Q9H3K6 86 aa11.85□□□□□ -0.51
TRAF1-203ENST00000546084 ZMYM3Q14202 1370 aa11.85□□□□□ -0.51
TRAF1-203ENST00000546084 GSPT1P15170 499 aaKnown RBP11.85□□□□□ -0.51
TRAF1-203ENST00000546084 RABEP1Q15276 862 aa11.85□□□□□ -0.51
TRAF1-203ENST00000546084 ZSCAN30Q86W11 494 aa11.85□□□□□ -0.51
TRAF1-203ENST00000546084 KLHDC4Q8TBB5 520 aa11.85□□□□□ -0.51
TRAF1-203ENST00000546084 BBXQ8WY36 941 aaPredicted RBP11.85□□□□□ -0.51
TRAF1-203ENST00000546084 ABCC11Q96J66 1382 aa11.84□□□□□ -0.51
TRAF1-203ENST00000546084 KCNQ3O43525 872 aa11.84□□□□□ -0.51
TRAF1-203ENST00000546084 TTC22Q5TAA0 569 aa11.84□□□□□ -0.51
TRAF1-203ENST00000546084 PPP1R42Q7Z4L9 355 aa11.84□□□□□ -0.51
TRAF1-203ENST00000546084 RNF17Q9BXT8 1623 aaKnown RBP11.84□□□□□ -0.51
TRAF1-203ENST00000546084 GNAI3P08754 354 aa11.84□□□□□ -0.51
TRAF1-203ENST00000546084 G3BP1Q13283 466 aaKnown RBP eCLIP11.84□□□□□ -0.51
TRAF1-203ENST00000546084 CEP85Q6P2H3 762 aa11.84□□□□□ -0.51
TRAF1-203ENST00000546084 HOMEZQ8IX15 550 aa11.84□□□□□ -0.51
TRAF1-203ENST00000546084 STRN4Q9NRL3 753 aa11.84□□□□□ -0.51
TRAF1-203ENST00000546084 CHPF2Q9P2E5 772 aa11.84□□□□□ -0.51
TRAF1-203ENST00000546084 IQGAP1P46940 1657 aa11.84□□□□□ -0.51
TRAF1-203ENST00000546084 ATP5J2-PTCD1G3V325 749 aa11.84□□□□□ -0.51
TRAF1-203ENST00000546084 SPC24Q8NBT2 197 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms