RNA–Protein interactions for RNA: ENST00000546000.1

CADM1-220, Transcript of cell adhesion molecule 1, humanhuman

TSL 1 (best)

Gene CADM1, Length 734 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CADM1-220ENST00000546000 GLI3P10071 1580 aa22.5■■□□□ 1.19
CADM1-220ENST00000546000 VPS72Q15906 364 aa22.5■■□□□ 1.19
CADM1-220ENST00000546000 MTHFSDQ2M296 383 aaKnown RBP22.5■■□□□ 1.19
CADM1-220ENST00000546000 RAPGEF4Q8WZA2 1011 aa22.5■■□□□ 1.19
CADM1-220ENST00000546000 DLG5Q8TDM6 1919 aa22.49■■□□□ 1.19
CADM1-220ENST00000546000 SHANK3Q9BYB0 1731 aa22.49■■□□□ 1.19
CADM1-220ENST00000546000 TATP17735 454 aaPredicted RBP22.49■■□□□ 1.19
CADM1-220ENST00000546000 TMPOP42166 694 aaKnown RBP22.49■■□□□ 1.19
CADM1-220ENST00000546000 POTEAQ6S8J7 498 aa22.49■■□□□ 1.19
CADM1-220ENST00000546000 NFE2L2Q16236 605 aa22.48■■□□□ 1.19
CADM1-220ENST00000546000 PNNQ9H307 717 aaKnown RBP22.48■■□□□ 1.19
CADM1-220ENST00000546000 IL2RBP14784 551 aa22.47■■□□□ 1.19
CADM1-220ENST00000546000 LRRC37A3O60309 1634 aa22.46■■□□□ 1.19
CADM1-220ENST00000546000 NEFMP07197 916 aa22.46■■□□□ 1.19
CADM1-220ENST00000546000 RIPK4P57078 832 aa22.44■■□□□ 1.18
CADM1-220ENST00000546000 ZNF530Q6P9A1 599 aaPredicted RBP22.44■■□□□ 1.18
CADM1-220ENST00000546000 FAM98CQ17RN3 349 aaKnown RBP22.43■■□□□ 1.18
CADM1-220ENST00000546000 THUMPD2Q9BTF0 503 aaKnown RBP22.43■■□□□ 1.18
CADM1-220ENST00000546000 TRIM35Q9UPQ4 493 aa22.43■■□□□ 1.18
CADM1-220ENST00000546000 ZBED9Q6R2W3 1325 aa22.42■■□□□ 1.18
CADM1-220ENST00000546000 DCTN1Q14203 1278 aa22.42■■□□□ 1.18
CADM1-220ENST00000546000 PLEKHO1Q53GL0 409 aaPredicted RBP22.42■■□□□ 1.18
CADM1-220ENST00000546000 GAS2L2Q8NHY3 880 aa22.42■■□□□ 1.18
CADM1-220ENST00000546000 THSD7AQ9UPZ6 1657 aa22.42■■□□□ 1.18
CADM1-220ENST00000546000 TNS2Q63HR2 1409 aa22.41■■□□□ 1.18
CADM1-220ENST00000546000 MAP3K5Q99683 1374 aa22.41■■□□□ 1.18
CADM1-220ENST00000546000 TRPC5Q9UL62 973 aaPredicted RBP22.41■■□□□ 1.18
CADM1-220ENST00000546000 ZNF521Q96K83 1311 aa22.4■■□□□ 1.18
CADM1-220ENST00000546000 GJD4Q96KN9 370 aaPredicted RBP22.4■■□□□ 1.18
CADM1-220ENST00000546000 QTRT2Q9H974 415 aaKnown RBP22.4■■□□□ 1.18
CADM1-220ENST00000546000 THRAP3Q9Y2W1 955 aaKnown RBP22.4■■□□□ 1.18
CADM1-220ENST00000546000 AMOTQ4VCS5 1084 aa22.39■■□□□ 1.17
CADM1-220ENST00000546000 ZCRB1Q8TBF4 217 aaKnown RBP22.39■■□□□ 1.17
CADM1-220ENST00000546000 CYP27B1O15528 508 aa22.38■■□□□ 1.17
CADM1-220ENST00000546000 BARGINQ6ZT62 677 aa22.38■■□□□ 1.17
CADM1-220ENST00000546000 MCM10Q7L590 875 aa22.38■■□□□ 1.17
CADM1-220ENST00000546000 WWC1Q8IX03 1113 aa22.38■■□□□ 1.17
CADM1-220ENST00000546000 SPG7Q9UQ90 795 aa22.38■■□□□ 1.17
CADM1-220ENST00000546000 KDM6AO15550 1401 aaPredicted RBP22.37■■□□□ 1.17
CADM1-220ENST00000546000 PLEKHG2Q9H7P9 1386 aa22.37■■□□□ 1.17
CADM1-220ENST00000546000 A0A0G2JS52 829 aa22.36■■□□□ 1.17
CADM1-220ENST00000546000 PHKG2P15735 406 aa22.36■■□□□ 1.17
CADM1-220ENST00000546000 MYT1Q01538 1121 aa22.36■■□□□ 1.17
CADM1-220ENST00000546000 PCDH11XQ9BZA7 1347 aa22.35■■□□□ 1.17
CADM1-220ENST00000546000 PCDH11YQ9BZA8 1340 aa22.35■■□□□ 1.17
CADM1-220ENST00000546000 GNAT3A8MTJ3 354 aa22.35■■□□□ 1.17
CADM1-220ENST00000546000 AKAP4Q5JQC9 854 aa22.35■■□□□ 1.17
CADM1-220ENST00000546000 C1orf141Q5JVX7 400 aa22.35■■□□□ 1.17
CADM1-220ENST00000546000 DDX54Q8TDD1 881 aaKnown RBP22.35■■□□□ 1.17
CADM1-220ENST00000546000 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.35■■□□□ 1.17
CADM1-220ENST00000546000 VIRMAQ69YN4 1812 aaKnown RBP22.35■■□□□ 1.17
CADM1-220ENST00000546000 TOGARAM1Q9Y4F4 1720 aa22.34■■□□□ 1.17
CADM1-220ENST00000546000 ADAMTS7Q9UKP4 1686 aa22.34■■□□□ 1.17
CADM1-220ENST00000546000 CCDC27Q2M243 656 aa22.34■■□□□ 1.17
CADM1-220ENST00000546000 ZNF772Q68DY9 489 aaPredicted RBP22.34■■□□□ 1.17
CADM1-220ENST00000546000 MPRIPQ6WCQ1 1025 aa22.34■■□□□ 1.17
CADM1-220ENST00000546000 CDCA7LQ96GN5 454 aa22.34■■□□□ 1.17
CADM1-220ENST00000546000 SPINK5Q9NQ38 1064 aaPredicted RBP22.34■■□□□ 1.17
CADM1-220ENST00000546000 LGR6Q9HBX8 967 aa22.33■■□□□ 1.17
CADM1-220ENST00000546000 LMOD3Q0VAK6 560 aa22.32■■□□□ 1.16
CADM1-220ENST00000546000 DDB1Q16531 1140 aa22.32■■□□□ 1.16
CADM1-220ENST00000546000 IL17REQ8NFR9 667 aa22.32■■□□□ 1.16
CADM1-220ENST00000546000 CDCA7Q9BWT1 371 aaPredicted RBP22.32■■□□□ 1.16
CADM1-220ENST00000546000 SCN11AQ9UI33 1791 aa22.31■■□□□ 1.16
CADM1-220ENST00000546000 IFNL2Q8IZJ0 200 aa22.31■■□□□ 1.16
CADM1-220ENST00000546000 EXOC5O00471 708 aa22.3■■□□□ 1.16
CADM1-220ENST00000546000 RNMTO43148 476 aaKnown RBP22.3■■□□□ 1.16
CADM1-220ENST00000546000 RTF1Q92541 710 aaKnown RBP22.3■■□□□ 1.16
CADM1-220ENST00000546000 NCBP3Q53F19 620 aaKnown RBP22.29■■□□□ 1.16
CADM1-220ENST00000546000 NGEFQ8N5V2 710 aa22.29■■□□□ 1.16
CADM1-220ENST00000546000 MARCH10Q8NA82 808 aaPredicted RBP22.29■■□□□ 1.16
CADM1-220ENST00000546000 DOT1LQ8TEK3 1739 aa22.28■■□□□ 1.16
CADM1-220ENST00000546000 CEMIPQ8WUJ3 1361 aa22.28■■□□□ 1.16
CADM1-220ENST00000546000 SEPT12Q8IYM1 358 aa22.28■■□□□ 1.16
CADM1-220ENST00000546000 MRC1P22897 1456 aa22.28■■□□□ 1.16
CADM1-220ENST00000546000 BRWD3Q6RI45 1802 aa22.27■■□□□ 1.16
CADM1-220ENST00000546000 RGS12O14924 1447 aa22.27■■□□□ 1.16
CADM1-220ENST00000546000 RBM6P78332 1123 aaKnown RBP22.27■■□□□ 1.16
CADM1-220ENST00000546000 LAS1LQ9Y4W2 734 aaKnown RBP22.27■■□□□ 1.16
CADM1-220ENST00000546000 SIPA1L3O60292 1781 aaPredicted RBP22.26■■□□□ 1.15
CADM1-220ENST00000546000 HTATSF1O43719 755 aaKnown RBP22.26■■□□□ 1.15
CADM1-220ENST00000546000 GOLGA2Q08379 1002 aa22.26■■□□□ 1.15
CADM1-220ENST00000546000 ONECUT3O60422 494 aaPredicted RBP22.25■■□□□ 1.15
CADM1-220ENST00000546000 FAM182BQ5T319 152 aa22.25■■□□□ 1.15
CADM1-220ENST00000546000 WDR63Q8IWG1 891 aa22.25■■□□□ 1.15
CADM1-220ENST00000546000 TSR2Q969E8 191 aaKnown RBP22.25■■□□□ 1.15
CADM1-220ENST00000546000 SLFN5Q08AF3 891 aa22.24■■□□□ 1.15
CADM1-220ENST00000546000 MIS18AQ9NYP9 233 aa22.24■■□□□ 1.15
CADM1-220ENST00000546000 NKX1-1Q15270 411 aaPredicted RBP22.23■■□□□ 1.15
CADM1-220ENST00000546000 DCAF5Q96JK2 942 aa22.23■■□□□ 1.15
CADM1-220ENST00000546000 RXRBP28702 533 aa22.22■■□□□ 1.15
CADM1-220ENST00000546000 IL16Q14005 1332 aa22.22■■□□□ 1.15
CADM1-220ENST00000546000 FANCIQ9NVI1 1328 aa22.22■■□□□ 1.15
CADM1-220ENST00000546000 HSP90AB1P08238 724 aaKnown RBP22.21■■□□□ 1.15
CADM1-220ENST00000546000 KDM3BQ7LBC6 1761 aa22.2■■□□□ 1.14
CADM1-220ENST00000546000 E9PSI1 815 aa22.2■■□□□ 1.14
CADM1-220ENST00000546000 ZNF853P0CG23 659 aa22.2■■□□□ 1.14
CADM1-220ENST00000546000 TEFQ10587 303 aa22.2■■□□□ 1.14
CADM1-220ENST00000546000 PDE3BQ13370 1112 aa22.2■■□□□ 1.14
CADM1-220ENST00000546000 DUSP27Q5VZP5 1158 aa22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms