RNA–Protein interactions for RNA: ENST00000545445.1

LTBR-214, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 379 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-214ENST00000545445 NFAT5O94916 1531 aa16.16■□□□□ 0.18
LTBR-214ENST00000545445 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.16■□□□□ 0.18
LTBR-214ENST00000545445 RGPD5Q99666 1765 aa16.15■□□□□ 0.18
LTBR-214ENST00000545445 USP31Q70CQ4 1352 aa16.15■□□□□ 0.18
LTBR-214ENST00000545445 NPC1L1Q9UHC9 1359 aa16.15■□□□□ 0.18
LTBR-214ENST00000545445 KCNH5Q8NCM2 988 aa16.15■□□□□ 0.18
LTBR-214ENST00000545445 SHANK3Q9BYB0 1731 aa16.14■□□□□ 0.17
LTBR-214ENST00000545445 FYB1O15117 783 aa16.14■□□□□ 0.17
LTBR-214ENST00000545445 LRRC4BQ9NT99 713 aa16.14■□□□□ 0.17
LTBR-214ENST00000545445 AMER1Q5JTC6 1135 aaPredicted RBP16.13■□□□□ 0.17
LTBR-214ENST00000545445 NME9Q86XW9 330 aa16.13■□□□□ 0.17
LTBR-214ENST00000545445 COG3Q96JB2 828 aa16.13■□□□□ 0.17
LTBR-214ENST00000545445 NLGN2Q8NFZ4 835 aa16.12■□□□□ 0.17
LTBR-214ENST00000545445 BTAF1O14981 1849 aa16.12■□□□□ 0.17
LTBR-214ENST00000545445 POLD1P28340 1107 aa16.11■□□□□ 0.17
LTBR-214ENST00000545445 AKT1S1Q96B36 256 aa16.11■□□□□ 0.17
LTBR-214ENST00000545445 NLRP2Q9NX02 1062 aa16.11■□□□□ 0.17
LTBR-214ENST00000545445 GGNBP2Q9H3C7 697 aa16.1■□□□□ 0.17
LTBR-214ENST00000545445 PNPLA7Q6ZV29 1317 aa16.1■□□□□ 0.17
LTBR-214ENST00000545445 ERBB3P21860 1342 aa16.09■□□□□ 0.17
LTBR-214ENST00000545445 IL2RBP14784 551 aa16.08■□□□□ 0.16
LTBR-214ENST00000545445 SLC16A10Q8TF71 515 aa16.08■□□□□ 0.16
LTBR-214ENST00000545445 USP54Q70EL1 1684 aa16.08■□□□□ 0.16
LTBR-214ENST00000545445 YBX3P16989 372 aaKnown RBP eCLIP16.07■□□□□ 0.166e-11■■□□□ 12.3
LTBR-214ENST00000545445 KIF20BQ96Q89 1820 aa16.07■□□□□ 0.16
LTBR-214ENST00000545445 ATP10DQ9P241 1426 aa16.06■□□□□ 0.16
LTBR-214ENST00000545445 KCNQ4P56696 695 aa16.06■□□□□ 0.16
LTBR-214ENST00000545445 MORC1Q86VD1 984 aa16.06■□□□□ 0.16
LTBR-214ENST00000545445 SLC27A3Q5K4L6 730 aa16.05■□□□□ 0.16
LTBR-214ENST00000545445 CC2D1BQ5T0F9 858 aaKnown RBP16.05■□□□□ 0.16
LTBR-214ENST00000545445 TFCP2L1Q9NZI6 479 aa16.05■□□□□ 0.16
LTBR-214ENST00000545445 COL24A1Q17RW2 1714 aa16.05■□□□□ 0.16
LTBR-214ENST00000545445 ANKRD24Q8TF21 1146 aa16.04■□□□□ 0.16
LTBR-214ENST00000545445 QSER1Q2KHR3 1735 aa16.04■□□□□ 0.16
LTBR-214ENST00000545445 TUBGCP6Q96RT7 1819 aa16.03■□□□□ 0.16
LTBR-214ENST00000545445 RALBP1Q15311 655 aa16.03■□□□□ 0.16
LTBR-214ENST00000545445 ANKRD26Q9UPS8 1709 aa16.02■□□□□ 0.16
LTBR-214ENST00000545445 GRIN3BO60391 1043 aa16.02■□□□□ 0.16
LTBR-214ENST00000545445 DDX54Q8TDD1 881 aaKnown RBP16.02■□□□□ 0.16
LTBR-214ENST00000545445 SYTL4Q96C24 671 aaPredicted RBP16.01■□□□□ 0.15
LTBR-214ENST00000545445 KIF24Q5T7B8 1368 aa16■□□□□ 0.15
LTBR-214ENST00000545445 MSH5O43196 834 aa15.99■□□□□ 0.15
LTBR-214ENST00000545445 ANP32CO43423 234 aa15.99■□□□□ 0.15
LTBR-214ENST00000545445 MSL1Q68DK7 614 aa15.99■□□□□ 0.15
LTBR-214ENST00000545445 LTN1O94822 1766 aa15.98■□□□□ 0.15
LTBR-214ENST00000545445 PRIM1P49642 420 aaKnown RBP15.98■□□□□ 0.15
LTBR-214ENST00000545445 ZNF526Q8TF50 670 aaPredicted RBP15.98■□□□□ 0.15
LTBR-214ENST00000545445 PRKRIP1Q9H875 184 aaPredicted RBP15.98■□□□□ 0.15
LTBR-214ENST00000545445 GPBP1L1Q9HC44 474 aaPredicted RBP15.98■□□□□ 0.15
LTBR-214ENST00000545445 HSPA6P17066 643 aa15.97■□□□□ 0.15
LTBR-214ENST00000545445 TNNT2P45379 298 aaPredicted RBP15.97■□□□□ 0.15
LTBR-214ENST00000545445 CNGB1Q14028 1251 aaPredicted RBP15.97■□□□□ 0.15
LTBR-214ENST00000545445 DIEXFQ68CQ4 756 aaKnown RBP15.97■□□□□ 0.15
LTBR-214ENST00000545445 CCNL1Q9UK58 526 aaPredicted RBP15.97■□□□□ 0.15
LTBR-214ENST00000545445 DOT1LQ8TEK3 1739 aa15.97■□□□□ 0.15
LTBR-214ENST00000545445 MAP3K19Q56UN5 1328 aa15.96■□□□□ 0.15
LTBR-214ENST00000545445 COL23A1Q86Y22 540 aaPredicted RBP15.96■□□□□ 0.15
LTBR-214ENST00000545445 LTV1Q96GA3 475 aaPredicted RBP15.96■□□□□ 0.15
LTBR-214ENST00000545445 POLKQ9UBT6 870 aa15.96■□□□□ 0.15
LTBR-214ENST00000545445 RTL1A6NKG5 1358 aa15.96■□□□□ 0.15
LTBR-214ENST00000545445 ADCY9O60503 1353 aa15.96■□□□□ 0.15
LTBR-214ENST00000545445 AMPHP49418 695 aa15.95■□□□□ 0.14
LTBR-214ENST00000545445 RRS1Q15050 365 aaKnown RBP15.95■□□□□ 0.14
LTBR-214ENST00000545445 MYBBP1AQ9BQG0 1328 aaKnown RBP15.94■□□□□ 0.14
LTBR-214ENST00000545445 LY75O60449 1722 aa15.94■□□□□ 0.14
LTBR-214ENST00000545445 PPP2R1AP30153 589 aa15.94■□□□□ 0.14
LTBR-214ENST00000545445 IP6K1Q92551 441 aa15.94■□□□□ 0.14
LTBR-214ENST00000545445 FLT4P35916 1363 aa15.94■□□□□ 0.14
LTBR-214ENST00000545445 SMG6Q86US8 1419 aaKnown RBP15.94■□□□□ 0.14
LTBR-214ENST00000545445 KAT6BQ8WYB5 2073 aa15.93■□□□□ 0.14
LTBR-214ENST00000545445 FBLN1P23142 703 aa15.93■□□□□ 0.14
LTBR-214ENST00000545445 HOXC9P31274 260 aa15.92■□□□□ 0.14
LTBR-214ENST00000545445 MTHFSP49914 203 aa15.92■□□□□ 0.14
LTBR-214ENST00000545445 EMILIN1Q9Y6C2 1016 aa15.92■□□□□ 0.14
LTBR-214ENST00000545445 MEGF6O75095 1541 aa15.92■□□□□ 0.14
LTBR-214ENST00000545445 PPM1GO15355 546 aaPredicted RBP15.91■□□□□ 0.14
LTBR-214ENST00000545445 CFAP53Q96M91 514 aa15.91■□□□□ 0.14
LTBR-214ENST00000545445 WWC3Q9ULE0 1092 aa15.91■□□□□ 0.14
LTBR-214ENST00000545445 CD2APQ9Y5K6 639 aa15.91■□□□□ 0.14
LTBR-214ENST00000545445 INSRP06213 1382 aa15.9■□□□□ 0.14
LTBR-214ENST00000545445 FAM208AQ9UK61 1670 aaKnown RBP15.9■□□□□ 0.14
LTBR-214ENST00000545445 MAP2P11137 1827 aaKnown RBP15.89■□□□□ 0.13
LTBR-214ENST00000545445 ZCRB1Q8TBF4 217 aaKnown RBP15.89■□□□□ 0.13
LTBR-214ENST00000545445 HSP90AB2PQ58FF8 381 aa15.87■□□□□ 0.13
LTBR-214ENST00000545445 IGSF1Q8N6C5 1336 aa15.87■□□□□ 0.13
LTBR-214ENST00000545445 C5P01031 1676 aa15.86■□□□□ 0.13
LTBR-214ENST00000545445 KIF3CO14782 793 aa15.85■□□□□ 0.13
LTBR-214ENST00000545445 DIAPH1O60610 1272 aaKnown RBP15.84■□□□□ 0.13
LTBR-214ENST00000545445 AMIGO3Q86WK7 504 aa15.84■□□□□ 0.13
LTBR-214ENST00000545445 USHBP1Q8N6Y0 703 aa15.84■□□□□ 0.13
LTBR-214ENST00000545445 NUDCQ9Y266 331 aa15.84■□□□□ 0.13
LTBR-214ENST00000545445 PALLDQ8WX93 1383 aa15.84■□□□□ 0.13
LTBR-214ENST00000545445 EIF4A2Q14240 407 aaKnown RBP15.83■□□□□ 0.12
LTBR-214ENST00000545445 SMIM5Q71RC9 77 aa15.83■□□□□ 0.12
LTBR-214ENST00000545445 PHF14O94880 888 aa15.82■□□□□ 0.12
LTBR-214ENST00000545445 IL13P35225 146 aa15.82■□□□□ 0.12
LTBR-214ENST00000545445 FLAD1Q8NFF5 587 aa15.82■□□□□ 0.12
LTBR-214ENST00000545445 RGPD2P0DJD1 1756 aa15.82■□□□□ 0.12
LTBR-214ENST00000545445 CCER2I3L3R5 266 aa15.81■□□□□ 0.12
LTBR-214ENST00000545445 AK7Q96M32 723 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms