RNA–Protein interactions for RNA: ENST00000545331.5

TULP3-208, Transcript of tubby like protein 3, humanhuman

TSL 2

Gene TULP3, Length 1,373 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TULP3-208ENST00000545331 COL3A1P02461 1466 aaPredicted RBP24.77■■□□□ 1.56
TULP3-208ENST00000545331 CFAP53Q96M91 514 aa24.77■■□□□ 1.56
TULP3-208ENST00000545331 DIAPH1O60610 1272 aaKnown RBP24.76■■□□□ 1.55
TULP3-208ENST00000545331 PKD1L3Q7Z443 1732 aa24.76■■□□□ 1.55
TULP3-208ENST00000545331 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.75■■□□□ 1.555e-6■■■■□ 22.9
TULP3-208ENST00000545331 KDRP35968 1356 aa24.75■■□□□ 1.55
TULP3-208ENST00000545331 SHANK3Q9BYB0 1731 aa24.74■■□□□ 1.55
TULP3-208ENST00000545331 PCDH11XQ9BZA7 1347 aa24.73■■□□□ 1.55
TULP3-208ENST00000545331 PCDH11YQ9BZA8 1340 aa24.73■■□□□ 1.55
TULP3-208ENST00000545331 SBF2Q86WG5 1849 aa24.73■■□□□ 1.55
TULP3-208ENST00000545331 TNS1Q9HBL0 1735 aaKnown RBP24.72■■□□□ 1.55
TULP3-208ENST00000545331 DDX54Q8TDD1 881 aaKnown RBP24.7■■□□□ 1.55
TULP3-208ENST00000545331 SPG7Q9UQ90 795 aa24.7■■□□□ 1.55
TULP3-208ENST00000545331 TRIM37O94972 964 aa24.69■■□□□ 1.54
TULP3-208ENST00000545331 BAG6P46379 1132 aa24.69■■□□□ 1.54
TULP3-208ENST00000545331 SULT6B1Q6IMI4 303 aa24.68■■□□□ 1.54
TULP3-208ENST00000545331 BCL11BQ9C0K0 894 aaPredicted RBP24.67■■□□□ 1.54
TULP3-208ENST00000545331 NUDCQ9Y266 331 aa24.67■■□□□ 1.54
TULP3-208ENST00000545331 NHSQ6T4R5 1651 aa24.67■■□□□ 1.54
TULP3-208ENST00000545331 AMOTQ4VCS5 1084 aa24.67■■□□□ 1.54
TULP3-208ENST00000545331 MYBBP1AQ9BQG0 1328 aaKnown RBP24.66■■□□□ 1.54
TULP3-208ENST00000545331 AEBP1Q8IUX7 1158 aa24.66■■□□□ 1.54
TULP3-208ENST00000545331 PLEKHO1Q53GL0 409 aaPredicted RBP24.65■■□□□ 1.54
TULP3-208ENST00000545331 PRKRIP1Q9H875 184 aaPredicted RBP24.65■■□□□ 1.54
TULP3-208ENST00000545331 U2SURPO15042 1029 aaKnown RBP24.63■■□□□ 1.53
TULP3-208ENST00000545331 CYP27B1O15528 508 aa24.63■■□□□ 1.53
TULP3-208ENST00000545331 IFNL2Q8IZJ0 200 aa24.62■■□□□ 1.53
TULP3-208ENST00000545331 RGPD3A6NKT7 1758 aaPredicted RBP24.62■■□□□ 1.53
TULP3-208ENST00000545331 RGPD4Q7Z3J3 1758 aa24.62■■□□□ 1.53
TULP3-208ENST00000545331 APBA3O96018 575 aa24.61■■□□□ 1.53
TULP3-208ENST00000545331 NKX1-1Q15270 411 aaPredicted RBP24.61■■□□□ 1.53
TULP3-208ENST00000545331 DOT1LQ8TEK3 1739 aa24.61■■□□□ 1.53
TULP3-208ENST00000545331 KAT6BQ8WYB5 2073 aa24.6■■□□□ 1.53
TULP3-208ENST00000545331 HMOX1P09601 288 aa24.6■■□□□ 1.53
TULP3-208ENST00000545331 DEFB132Q7Z7B7 95 aa24.6■■□□□ 1.53
TULP3-208ENST00000545331 PHKG2P15735 406 aa24.59■■□□□ 1.53
TULP3-208ENST00000545331 PLSCR1O15162 318 aa24.58■■□□□ 1.53
TULP3-208ENST00000545331 HSP90AB1P08238 724 aaKnown RBP24.58■■□□□ 1.53
TULP3-208ENST00000545331 ACSBG1Q96GR2 724 aa24.58■■□□□ 1.53
TULP3-208ENST00000545331 KCNQ2O43526 872 aa24.56■■□□□ 1.52
TULP3-208ENST00000545331 EN1Q05925 392 aaPredicted RBP24.56■■□□□ 1.52
TULP3-208ENST00000545331 ZNF530Q6P9A1 599 aaPredicted RBP24.55■■□□□ 1.52
TULP3-208ENST00000545331 CAMKK2Q96RR4 588 aa24.55■■□□□ 1.52
TULP3-208ENST00000545331 BTAF1O14981 1849 aa24.55■■□□□ 1.52
TULP3-208ENST00000545331 FCHSD2O94868 740 aa24.54■■□□□ 1.52
TULP3-208ENST00000545331 U2AF1L5P0DN76 240 aaPredicted RBP24.54■■□□□ 1.52
TULP3-208ENST00000545331 U2AF1Q01081 240 aaKnown RBP eCLIP24.54■■□□□ 1.52
TULP3-208ENST00000545331 C1orf141Q5JVX7 400 aa24.54■■□□□ 1.52
TULP3-208ENST00000545331 PRIM1P49642 420 aaKnown RBP24.54■■□□□ 1.52
TULP3-208ENST00000545331 PTF1AQ7RTS3 328 aa24.54■■□□□ 1.52
TULP3-208ENST00000545331 RSPH6AQ9H0K4 717 aa24.54■■□□□ 1.52
TULP3-208ENST00000545331 TOGARAM1Q9Y4F4 1720 aa24.53■■□□□ 1.52
TULP3-208ENST00000545331 DCAF5Q96JK2 942 aa24.53■■□□□ 1.52
TULP3-208ENST00000545331 RREB1Q92766 1687 aa24.52■■□□□ 1.52
TULP3-208ENST00000545331 AKAP4Q5JQC9 854 aa24.52■■□□□ 1.52
TULP3-208ENST00000545331 SYTL4Q96C24 671 aaPredicted RBP24.52■■□□□ 1.52
TULP3-208ENST00000545331 ANP32CO43423 234 aa24.51■■□□□ 1.51
TULP3-208ENST00000545331 EZH2Q15910 746 aaKnown RBP24.51■■□□□ 1.51
TULP3-208ENST00000545331 PRKAR2BP31323 418 aa24.5■■□□□ 1.51
TULP3-208ENST00000545331 GAS2L2Q8NHY3 880 aa24.5■■□□□ 1.51
TULP3-208ENST00000545331 ITGB4P16144 1822 aa24.49■■□□□ 1.51
TULP3-208ENST00000545331 PNNQ9H307 717 aaKnown RBP24.49■■□□□ 1.51
TULP3-208ENST00000545331 ERVV-2B6SEH9 535 aa24.48■■□□□ 1.51
TULP3-208ENST00000545331 MTHFSDQ2M296 383 aaKnown RBP24.47■■□□□ 1.51
TULP3-208ENST00000545331 KDM6AO15550 1401 aaPredicted RBP24.47■■□□□ 1.51
TULP3-208ENST00000545331 NEFMP07197 916 aa24.46■■□□□ 1.51
TULP3-208ENST00000545331 NUP188Q5SRE5 1749 aa24.45■■□□□ 1.51
TULP3-208ENST00000545331 SCN11AQ9UI33 1791 aa24.44■■□□□ 1.5
TULP3-208ENST00000545331 MPRIPQ6WCQ1 1025 aa24.44■■□□□ 1.5
TULP3-208ENST00000545331 TMOD3Q9NYL9 352 aa24.44■■□□□ 1.5
TULP3-208ENST00000545331 ADAMTS7Q9UKP4 1686 aa24.44■■□□□ 1.5
TULP3-208ENST00000545331 TXNRD1Q16881 649 aa24.43■■□□□ 1.5
TULP3-208ENST00000545331 LY75O60449 1722 aa24.43■■□□□ 1.5
TULP3-208ENST00000545331 SMARCC1Q92922 1105 aaPredicted RBP24.42■■□□□ 1.5
TULP3-208ENST00000545331 MAP3K5Q99683 1374 aa24.42■■□□□ 1.5
TULP3-208ENST00000545331 HMGB2P26583 209 aaKnown RBP24.42■■□□□ 1.5
TULP3-208ENST00000545331 SLC27A3Q5K4L6 730 aa24.42■■□□□ 1.5
TULP3-208ENST00000545331 PIGBQ92521 554 aa24.42■■□□□ 1.5
TULP3-208ENST00000545331 PHACTR3Q96KR7 559 aa24.42■■□□□ 1.5
TULP3-208ENST00000545331 MRC1P22897 1456 aa24.41■■□□□ 1.5
TULP3-208ENST00000545331 WDR43Q15061 677 aaKnown RBP eCLIP24.41■■□□□ 1.5
TULP3-208ENST00000545331 PROM2Q8N271 834 aa24.41■■□□□ 1.5
TULP3-208ENST00000545331 GNAT3A8MTJ3 354 aa24.4■■□□□ 1.5
TULP3-208ENST00000545331 CABP4P57796 275 aa24.4■■□□□ 1.5
TULP3-208ENST00000545331 PLEKHF1Q96S99 279 aa24.4■■□□□ 1.5
TULP3-208ENST00000545331 VIRMAQ69YN4 1812 aaKnown RBP24.39■■□□□ 1.5
TULP3-208ENST00000545331 RNMTO43148 476 aaKnown RBP24.39■■□□□ 1.49
TULP3-208ENST00000545331 NBPF14Q5TI25 921 aa24.39■■□□□ 1.49
TULP3-208ENST00000545331 PALLDQ8WX93 1383 aa24.38■■□□□ 1.49
TULP3-208ENST00000545331 MAPK8IP3Q9UPT6 1336 aa24.37■■□□□ 1.49
TULP3-208ENST00000545331 SLC52A2Q9HAB3 445 aa24.36■■□□□ 1.49
TULP3-208ENST00000545331 HTATSF1O43719 755 aaKnown RBP24.35■■□□□ 1.49
TULP3-208ENST00000545331 PAPPAQ13219 1627 aa24.34■■□□□ 1.49
TULP3-208ENST00000545331 LGR6Q9HBX8 967 aa24.34■■□□□ 1.49
TULP3-208ENST00000545331 CEMIPQ8WUJ3 1361 aa24.33■■□□□ 1.49
TULP3-208ENST00000545331 NFATC2IPQ8NCF5 419 aa24.33■■□□□ 1.49
TULP3-208ENST00000545331 CCNL1Q9UK58 526 aaPredicted RBP24.33■■□□□ 1.49
TULP3-208ENST00000545331 RTF1Q92541 710 aaKnown RBP24.32■■□□□ 1.48
TULP3-208ENST00000545331 ATG3Q9NT62 314 aa24.32■■□□□ 1.48
TULP3-208ENST00000545331 NFE2L2Q16236 605 aa24.31■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms