RNA–Protein interactions for RNA: ENST00000545067.6

CCDC7-210, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 4,001 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-210ENST00000545067 PUS7Q96PZ0 661 aaKnown RBP10.55□□□□□ -0.72
CCDC7-210ENST00000545067 NLRP2Q9NX02 1062 aa10.55□□□□□ -0.72
CCDC7-210ENST00000545067 RIMS2Q9UQ26 1411 aa10.55□□□□□ -0.72
CCDC7-210ENST00000545067 GNAT3A8MTJ3 354 aa10.55□□□□□ -0.72
CCDC7-210ENST00000545067 FIBPO43427 364 aa10.55□□□□□ -0.72
CCDC7-210ENST00000545067 MX1P20591 662 aa10.55□□□□□ -0.72
CCDC7-210ENST00000545067 SRCIN1Q9C0H9 1055 aa10.55□□□□□ -0.72
CCDC7-210ENST00000545067 E9PCH4 1651 aa10.55□□□□□ -0.72
CCDC7-210ENST00000545067 MADDQ8WXG6 1647 aa10.55□□□□□ -0.72
CCDC7-210ENST00000545067 BAG4O95429 457 aaKnown RBP10.55□□□□□ -0.72
CCDC7-210ENST00000545067 TAF7Q15545 349 aaPredicted RBP10.55□□□□□ -0.72
CCDC7-210ENST00000545067 ARHGAP45Q92619 1136 aa10.55□□□□□ -0.72
CCDC7-210ENST00000545067 PLXNC1O60486 1568 aa10.55□□□□□ -0.72
CCDC7-210ENST00000545067 POGZQ7Z3K3 1410 aa10.55□□□□□ -0.72
CCDC7-210ENST00000545067 SYCE3A1L190 88 aa10.55□□□□□ -0.72
CCDC7-210ENST00000545067 CEP85Q6P2H3 762 aa10.55□□□□□ -0.72
CCDC7-210ENST00000545067 ANKRD44Q8N8A2 993 aa10.55□□□□□ -0.72
CCDC7-210ENST00000545067 SYAP1Q96A49 352 aaPredicted RBP10.55□□□□□ -0.72
CCDC7-210ENST00000545067 GPATCH3Q96I76 525 aa10.55□□□□□ -0.72
CCDC7-210ENST00000545067 BCL11BQ9C0K0 894 aaPredicted RBP10.55□□□□□ -0.72
CCDC7-210ENST00000545067 MYL6BP14649 208 aa10.54□□□□□ -0.72
CCDC7-210ENST00000545067 HSP90AA2PQ14568 343 aaPredicted RBP10.54□□□□□ -0.72
CCDC7-210ENST00000545067 CIZ1Q9ULV3 898 aaPredicted RBP10.54□□□□□ -0.72
CCDC7-210ENST00000545067 DCTPP1Q9H773 170 aa10.54□□□□□ -0.72
CCDC7-210ENST00000545067 RRAGDQ9NQL2 400 aaPredicted RBP10.54□□□□□ -0.72
CCDC7-210ENST00000545067 SMC3Q9UQE7 1217 aa10.54□□□□□ -0.72
CCDC7-210ENST00000545067 ZC3H6P61129 1189 aaKnown RBP10.54□□□□□ -0.72
CCDC7-210ENST00000545067 CLASRPQ8N2M8 674 aaKnown RBP10.54□□□□□ -0.72
CCDC7-210ENST00000545067 RIC3Q7Z5B4 369 aa10.53□□□□□ -0.72
CCDC7-210ENST00000545067 SIRT2Q8IXJ6 389 aa10.53□□□□□ -0.72
CCDC7-210ENST00000545067 SPG7Q9UQ90 795 aa10.53□□□□□ -0.72
CCDC7-210ENST00000545067 MAP3K19Q56UN5 1328 aa10.53□□□□□ -0.72
CCDC7-210ENST00000545067 G3BP1Q13283 466 aaKnown RBP eCLIP10.53□□□□□ -0.72
CCDC7-210ENST00000545067 JARID2Q92833 1246 aaPredicted RBP10.53□□□□□ -0.72
CCDC7-210ENST00000545067 EYA1Q99502 592 aa10.53□□□□□ -0.72
CCDC7-210ENST00000545067 PHF23Q9BUL5 403 aaPredicted RBP10.53□□□□□ -0.72
CCDC7-210ENST00000545067 GSPT1P15170 499 aaKnown RBP10.53□□□□□ -0.72
CCDC7-210ENST00000545067 ANTXR1Q9H6X2 564 aa10.53□□□□□ -0.72
CCDC7-210ENST00000545067 FAM13BQ9NYF5 915 aa10.53□□□□□ -0.72
CCDC7-210ENST00000545067 R3HCC1Q9Y3T6 440 aaKnown RBP10.53□□□□□ -0.72
CCDC7-210ENST00000545067 PDE1AP54750 535 aa10.52□□□□□ -0.73
CCDC7-210ENST00000545067 MYOM2P54296 1465 aa10.52□□□□□ -0.73
CCDC7-210ENST00000545067 PI4KAP2A4QPH2 592 aa10.51□□□□□ -0.73
CCDC7-210ENST00000545067 ZKSCAN1P17029 563 aaPredicted RBP10.51□□□□□ -0.73
CCDC7-210ENST00000545067 KIAA2012Q0VF49 1180 aa10.51□□□□□ -0.73
CCDC7-210ENST00000545067 STK3Q13188 491 aa10.51□□□□□ -0.73
CCDC7-210ENST00000545067 PKP1Q13835 747 aa10.51□□□□□ -0.73
CCDC7-210ENST00000545067 PI4KAP1Q8N8J0 262 aa10.51□□□□□ -0.73
CCDC7-210ENST00000545067 PHAXQ9H814 394 aaKnown RBP10.51□□□□□ -0.73
CCDC7-210ENST00000545067 UHRF1BP1LA0JNW5 1464 aa10.51□□□□□ -0.73
CCDC7-210ENST00000545067 BTBD11A6QL63 1104 aa10.51□□□□□ -0.73
CCDC7-210ENST00000545067 PPP1R42Q7Z4L9 355 aa10.51□□□□□ -0.73
CCDC7-210ENST00000545067 FBXW7Q969H0 707 aa10.51□□□□□ -0.73
CCDC7-210ENST00000545067 MSH6P52701 1360 aa10.51□□□□□ -0.73
CCDC7-210ENST00000545067 RBM25P49756 843 aaKnown RBP10.51□□□□□ -0.73
CCDC7-210ENST00000545067 RBM10P98175 930 aaKnown RBP10.51□□□□□ -0.73
CCDC7-210ENST00000545067 ZRSR1Q15695 479 aaKnown RBP10.51□□□□□ -0.73
CCDC7-210ENST00000545067 FERMT3Q86UX7 667 aa10.51□□□□□ -0.73
CCDC7-210ENST00000545067 NEXNQ0ZGT2 675 aa10.5□□□□□ -0.73
CCDC7-210ENST00000545067 GORABQ5T7V8 394 aa10.5□□□□□ -0.73
CCDC7-210ENST00000545067 CNTROBQ8N137 903 aa10.5□□□□□ -0.73
CCDC7-210ENST00000545067 MAP3K4Q9Y6R4 1608 aa10.5□□□□□ -0.73
CCDC7-210ENST00000545067 METP08581 1390 aa10.5□□□□□ -0.73
CCDC7-210ENST00000545067 THEMISQ8N1K5 641 aaPredicted RBP10.5□□□□□ -0.73
CCDC7-210ENST00000545067 NEUROD6Q96NK8 337 aa10.5□□□□□ -0.73
CCDC7-210ENST00000545067 FSD1Q9BTV5 496 aa10.5□□□□□ -0.73
CCDC7-210ENST00000545067 LRRC59Q96AG4 307 aaKnown RBP10.5□□□□□ -0.73
CCDC7-210ENST00000545067 PIP4K2AP48426 406 aaPredicted RBP10.49□□□□□ -0.73
CCDC7-210ENST00000545067 RAB3GAP1Q15042 981 aa10.49□□□□□ -0.73
CCDC7-210ENST00000545067 AACSQ86V21 672 aa10.49□□□□□ -0.73
CCDC7-210ENST00000545067 RAPGEF4Q8WZA2 1011 aa10.49□□□□□ -0.73
CCDC7-210ENST00000545067 SNX21Q969T3 373 aa10.49□□□□□ -0.73
CCDC7-210ENST00000545067 PTPRCP08575 1304 aa10.49□□□□□ -0.73
CCDC7-210ENST00000545067 SPHKAPQ2M3C7 1700 aa10.49□□□□□ -0.73
CCDC7-210ENST00000545067 PNMA6EA0A0J9YXQ4 647 aa10.49□□□□□ -0.73
CCDC7-210ENST00000545067 PPFIA3O75145 1194 aa10.49□□□□□ -0.73
CCDC7-210ENST00000545067 RUFY2Q8WXA3 655 aa10.49□□□□□ -0.73
CCDC7-210ENST00000545067 TMX3Q96JJ7 454 aa10.49□□□□□ -0.73
CCDC7-210ENST00000545067 TCEANC2Q96MN5 208 aa10.49□□□□□ -0.73
CCDC7-210ENST00000545067 DNAJC2Q99543 621 aaKnown RBP10.49□□□□□ -0.73
CCDC7-210ENST00000545067 USP26Q9BXU7 913 aa10.49□□□□□ -0.73
CCDC7-210ENST00000545067 CCDC8Q9H0W5 538 aaPredicted RBP10.49□□□□□ -0.73
CCDC7-210ENST00000545067 ABCA6Q8N139 1617 aa10.49□□□□□ -0.73
CCDC7-210ENST00000545067 TET3O43151 1660 aa10.49□□□□□ -0.73
CCDC7-210ENST00000545067 TTC5Q8N0Z6 440 aa10.49□□□□□ -0.73
CCDC7-210ENST00000545067 VSIG10Q8N0Z9 540 aa10.49□□□□□ -0.73
CCDC7-210ENST00000545067 CWC22Q9HCG8 908 aaKnown RBP10.49□□□□□ -0.73
CCDC7-210ENST00000545067 KIF1BO60333 1816 aa10.49□□□□□ -0.73
CCDC7-210ENST00000545067 CHL1O00533 1208 aa10.49□□□□□ -0.73
CCDC7-210ENST00000545067 CEBPZQ03701 1054 aaKnown RBP10.49□□□□□ -0.73
CCDC7-210ENST00000545067 JAKMIP1Q96N16 626 aaKnown RBP10.49□□□□□ -0.73
CCDC7-210ENST00000545067 EFCAB6Q5THR3 1501 aa10.48□□□□□ -0.73
CCDC7-210ENST00000545067 KDM4AO75164 1064 aa10.48□□□□□ -0.73
CCDC7-210ENST00000545067 CPA1P15085 419 aa10.48□□□□□ -0.73
CCDC7-210ENST00000545067 CASTP20810 708 aaKnown RBP10.48□□□□□ -0.73
CCDC7-210ENST00000545067 LTKP29376 864 aa10.48□□□□□ -0.73
CCDC7-210ENST00000545067 GAS2L3Q86XJ1 694 aa10.48□□□□□ -0.73
CCDC7-210ENST00000545067 CHPF2Q9P2E5 772 aa10.48□□□□□ -0.73
CCDC7-210ENST00000545067 ZMYM3Q14202 1370 aa10.48□□□□□ -0.73
CCDC7-210ENST00000545067 PLEKHO1Q53GL0 409 aaPredicted RBP10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms