RNA–Protein interactions for RNA: ENST00000545046.5

CHFR-224, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 2,186 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-224ENST00000545046 LMOD2Q6P5Q4 547 aa21.16■□□□□ 0.98
CHFR-224ENST00000545046 TMEM94Q12767 1356 aa21.16■□□□□ 0.98
CHFR-224ENST00000545046 KIAA0232Q92628 1395 aa21.15■□□□□ 0.98
CHFR-224ENST00000545046 ZBTB7CA1YPR0 619 aa21.15■□□□□ 0.98
CHFR-224ENST00000545046 ANP32AP39687 249 aaKnown RBP21.15■□□□□ 0.98
CHFR-224ENST00000545046 CHMP4BQ9H444 224 aaKnown RBP21.14■□□□□ 0.97
CHFR-224ENST00000545046 SLIT3O75094 1523 aa21.13■□□□□ 0.97
CHFR-224ENST00000545046 GCP02774 474 aa21.13■□□□□ 0.97
CHFR-224ENST00000545046 HSPA2P54652 639 aa21.13■□□□□ 0.97
CHFR-224ENST00000545046 DCCP43146 1447 aa21.13■□□□□ 0.97
CHFR-224ENST00000545046 GNAT3A8MTJ3 354 aa21.13■□□□□ 0.97
CHFR-224ENST00000545046 API5Q9BZZ5 524 aaKnown RBP21.12■□□□□ 0.97
CHFR-224ENST00000545046 MST1RQ04912 1400 aa21.11■□□□□ 0.97
CHFR-224ENST00000545046 ZBTB40Q9NUA8 1239 aa21.1■□□□□ 0.97
CHFR-224ENST00000545046 TSPYL4Q9UJ04 414 aa21.1■□□□□ 0.97
CHFR-224ENST00000545046 FAM161AQ3B820 660 aa21.1■□□□□ 0.97
CHFR-224ENST00000545046 ARHGEF25Q86VW2 580 aa21.1■□□□□ 0.97
CHFR-224ENST00000545046 USHBP1Q8N6Y0 703 aa21.1■□□□□ 0.97
CHFR-224ENST00000545046 USP19O94966 1318 aa21.1■□□□□ 0.97
CHFR-224ENST00000545046 MSH5O43196 834 aa21.09■□□□□ 0.97
CHFR-224ENST00000545046 RGPD2P0DJD1 1756 aa21.09■□□□□ 0.97
CHFR-224ENST00000545046 NBPF6Q5VWK0 638 aa21.09■□□□□ 0.97
CHFR-224ENST00000545046 CADPS2Q86UW7 1296 aa21.09■□□□□ 0.97
CHFR-224ENST00000545046 NBPF4Q96M43 638 aa21.09■□□□□ 0.97
CHFR-224ENST00000545046 MAP3K5Q99683 1374 aa21.09■□□□□ 0.97
CHFR-224ENST00000545046 PLEKHG5O94827 1062 aa21.08■□□□□ 0.97
CHFR-224ENST00000545046 HDAC1Q13547 482 aaPredicted RBP21.08■□□□□ 0.97
CHFR-224ENST00000545046 LRRC37A3O60309 1634 aa21.08■□□□□ 0.97
CHFR-224ENST00000545046 ABCC4O15439 1325 aa21.07■□□□□ 0.96
CHFR-224ENST00000545046 KRT24Q2M2I5 525 aa21.07■□□□□ 0.96
CHFR-224ENST00000545046 MIS18AQ9NYP9 233 aa21.07■□□□□ 0.96
CHFR-224ENST00000545046 ALS2Q96Q42 1657 aa21.07■□□□□ 0.96
CHFR-224ENST00000545046 MYT1Q01538 1121 aa21.07■□□□□ 0.96
CHFR-224ENST00000545046 PDZRN3Q9UPQ7 1066 aa21.06■□□□□ 0.96
CHFR-224ENST00000545046 MSH6P52701 1360 aa21.05■□□□□ 0.96
CHFR-224ENST00000545046 ZBTB7BO15156 539 aaPredicted RBP21.04■□□□□ 0.96
CHFR-224ENST00000545046 NPM2Q86SE8 214 aaKnown RBP21.04■□□□□ 0.96
CHFR-224ENST00000545046 C8orf34Q49A92 452 aa21.03■□□□□ 0.96
CHFR-224ENST00000545046 ERICH6Q7L0X2 663 aa21.03■□□□□ 0.96
CHFR-224ENST00000545046 IPO9Q96P70 1041 aaKnown RBP21.03■□□□□ 0.96
CHFR-224ENST00000545046 BABAM1Q9NWV8 329 aa21.03■□□□□ 0.96
CHFR-224ENST00000545046 IL17REQ8NFR9 667 aa21.03■□□□□ 0.96
CHFR-224ENST00000545046 LRRC59Q96AG4 307 aaKnown RBP21.03■□□□□ 0.96
CHFR-224ENST00000545046 NPHP3Q7Z494 1330 aa21.02■□□□□ 0.96
CHFR-224ENST00000545046 KDM4FA0A1W2PPD8 638 aa21.02■□□□□ 0.96
CHFR-224ENST00000545046 TAF7Q15545 349 aaPredicted RBP21.02■□□□□ 0.96
CHFR-224ENST00000545046 ANKRD24Q8TF21 1146 aa21.02■□□□□ 0.96
CHFR-224ENST00000545046 VIRMAQ69YN4 1812 aaKnown RBP21.02■□□□□ 0.96
CHFR-224ENST00000545046 STRCQ7RTU9 1775 aa21.02■□□□□ 0.95
CHFR-224ENST00000545046 PTPRCP08575 1304 aa21.01■□□□□ 0.95
CHFR-224ENST00000545046 XIRP1Q702N8 1843 aaKnown RBP21.01■□□□□ 0.95
CHFR-224ENST00000545046 LMTK3Q96Q04 1460 aa21.01■□□□□ 0.95
CHFR-224ENST00000545046 PLEKHO1Q53GL0 409 aaPredicted RBP21■□□□□ 0.95
CHFR-224ENST00000545046 RGPD5Q99666 1765 aa21■□□□□ 0.95
CHFR-224ENST00000545046 SLC4A2P04920 1241 aa20.99■□□□□ 0.95
CHFR-224ENST00000545046 MED1Q15648 1581 aaPredicted RBP20.99■□□□□ 0.95
CHFR-224ENST00000545046 AMOTQ4VCS5 1084 aa20.99■□□□□ 0.95
CHFR-224ENST00000545046 SMC5Q8IY18 1101 aa20.99■□□□□ 0.95
CHFR-224ENST00000545046 DDX17Q92841 729 aaKnown RBP20.99■□□□□ 0.95
CHFR-224ENST00000545046 INTS3Q68E01 1043 aaKnown RBP20.98■□□□□ 0.95
CHFR-224ENST00000545046 SOS1Q07889 1333 aaPredicted RBP20.98■□□□□ 0.95
CHFR-224ENST00000545046 LMO7Q8WWI1 1683 aa20.98■□□□□ 0.95
CHFR-224ENST00000545046 ZC3H6P61129 1189 aaKnown RBP20.97■□□□□ 0.95
CHFR-224ENST00000545046 NCAPD2Q15021 1401 aa20.97■□□□□ 0.95
CHFR-224ENST00000545046 CACNA1FO60840 1977 aa20.97■□□□□ 0.95
CHFR-224ENST00000545046 AKAP4Q5JQC9 854 aa20.97■□□□□ 0.95
CHFR-224ENST00000545046 STK31Q9BXU1 1019 aa20.97■□□□□ 0.95
CHFR-224ENST00000545046 AXIN2Q9Y2T1 843 aa20.97■□□□□ 0.95
CHFR-224ENST00000545046 CAMTA1Q9Y6Y1 1673 aa20.97■□□□□ 0.95
CHFR-224ENST00000545046 ZNF530Q6P9A1 599 aaPredicted RBP20.96■□□□□ 0.95
CHFR-224ENST00000545046 CEMIPQ8WUJ3 1361 aa20.95■□□□□ 0.95
CHFR-224ENST00000545046 TNS3Q68CZ2 1445 aa20.95■□□□□ 0.94
CHFR-224ENST00000545046 CCDC30Q5VVM6 783 aa20.95■□□□□ 0.94
CHFR-224ENST00000545046 ZBTB47Q9UFB7 747 aaPredicted RBP20.95■□□□□ 0.94
CHFR-224ENST00000545046 NOP58Q9Y2X3 529 aaKnown RBP20.95■□□□□ 0.94
CHFR-224ENST00000545046 RGS12O14924 1447 aa20.94■□□□□ 0.94
CHFR-224ENST00000545046 ANP32EQ9BTT0 268 aa20.94■□□□□ 0.94
CHFR-224ENST00000545046 C1orf141Q5JVX7 400 aa20.93■□□□□ 0.94
CHFR-224ENST00000545046 C1orf115Q9H7X2 142 aa20.93■□□□□ 0.94
CHFR-224ENST00000545046 GCC1Q96CN9 775 aa20.93■□□□□ 0.94
CHFR-224ENST00000545046 LGR6Q9HBX8 967 aa20.93■□□□□ 0.94
CHFR-224ENST00000545046 PXDNQ92626 1479 aa20.93■□□□□ 0.94
CHFR-224ENST00000545046 ERBB3P21860 1342 aa20.92■□□□□ 0.94
CHFR-224ENST00000545046 FAM208AQ9UK61 1670 aaKnown RBP20.92■□□□□ 0.94
CHFR-224ENST00000545046 SPATA31A3Q5VYP0 1347 aa20.92■□□□□ 0.94
CHFR-224ENST00000545046 TEFQ10587 303 aa20.91■□□□□ 0.94
CHFR-224ENST00000545046 NUCB1Q02818 461 aa20.9■□□□□ 0.94
CHFR-224ENST00000545046 DDRGK1Q96HY6 314 aa20.9■□□□□ 0.94
CHFR-224ENST00000545046 G2E3Q7L622 706 aa20.9■□□□□ 0.94
CHFR-224ENST00000545046 KDM3BQ7LBC6 1761 aa20.89■□□□□ 0.94
CHFR-224ENST00000545046 BRINP3Q76B58 766 aa20.89■□□□□ 0.94
CHFR-224ENST00000545046 COL18A1P39060 1754 aa20.89■□□□□ 0.93
CHFR-224ENST00000545046 MPRIPQ6WCQ1 1025 aa20.89■□□□□ 0.93
CHFR-224ENST00000545046 CABLES1Q8TDN4 633 aa20.89■□□□□ 0.93
CHFR-224ENST00000545046 CHMP4AQ9BY43 222 aa20.89■□□□□ 0.93
CHFR-224ENST00000545046 ZNF335Q9H4Z2 1342 aaPredicted RBP20.88■□□□□ 0.93
CHFR-224ENST00000545046 RNMTO43148 476 aaKnown RBP20.88■□□□□ 0.93
CHFR-224ENST00000545046 CRYBG1Q9Y4K1 1723 aa20.88■□□□□ 0.93
CHFR-224ENST00000545046 CCT4P50991 539 aaKnown RBP20.87■□□□□ 0.93
CHFR-224ENST00000545046 CHD1LQ86WJ1 897 aa20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms