RNA–Protein interactions for RNA: ENST00000545015.1

POLE-222, Transcript of DNA polymerase epsilon, catalytic subunit, human

TSL 2

Gene POLE, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
POLE-222	ENST00000545015	LRP5	O75197	1615 aa		18.4	■□□□□ 0.54
POLE-222	ENST00000545015	KNSTRN	Q9Y448	316 aa		18.39	■□□□□ 0.53
POLE-222	ENST00000545015	PLEKHG2	Q9H7P9	1386 aa		18.39	■□□□□ 0.53
POLE-222	ENST00000545015	MAP2	P11137	1827 aa	Known RBP	18.38	■□□□□ 0.53
POLE-222	ENST00000545015	TAT	P17735	454 aa	Predicted RBP	18.38	■□□□□ 0.53
POLE-222	ENST00000545015	AMER1	Q5JTC6	1135 aa	Predicted RBP	18.38	■□□□□ 0.53
POLE-222	ENST00000545015	USHBP1	Q8N6Y0	703 aa		18.38	■□□□□ 0.53
POLE-222	ENST00000545015	DDX54	Q8TDD1	881 aa	Known RBP	18.38	■□□□□ 0.53
POLE-222	ENST00000545015	SHANK3	Q9BYB0	1731 aa		18.37	■□□□□ 0.53
POLE-222	ENST00000545015	PPM1G	O15355	546 aa	Predicted RBP	18.37	■□□□□ 0.53
POLE-222	ENST00000545015	PER1	O15534	1290 aa	Predicted RBP	18.37	■□□□□ 0.53
POLE-222	ENST00000545015	TXNRD1	Q16881	649 aa		18.37	■□□□□ 0.53
POLE-222	ENST00000545015	ACSBG1	Q96GR2	724 aa		18.37	■□□□□ 0.53
POLE-222	ENST00000545015	EYA1	Q99502	592 aa		18.36	■□□□□ 0.53
POLE-222	ENST00000545015	MORC1	Q86VD1	984 aa		18.35	■□□□□ 0.53
POLE-222	ENST00000545015	PCDH11X	Q9BZA7	1347 aa		18.34	■□□□□ 0.53
POLE-222	ENST00000545015	PCDH11Y	Q9BZA8	1340 aa		18.34	■□□□□ 0.53
POLE-222	ENST00000545015	EIF4A2	Q14240	407 aa	Known RBP	18.34	■□□□□ 0.53
POLE-222	ENST00000545015	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	18.34	■□□□□ 0.53
POLE-222	ENST00000545015	NPC1L1	Q9UHC9	1359 aa		18.33	■□□□□ 0.53
POLE-222	ENST00000545015	TNNT2	P45379	298 aa	Predicted RBP	18.33	■□□□□ 0.52
POLE-222	ENST00000545015	ANO8	Q9HCE9	1232 aa	Predicted RBP	18.33	■□□□□ 0.52
POLE-222	ENST00000545015	BTAF1	O14981	1849 aa		18.33	■□□□□ 0.52
POLE-222	ENST00000545015	PKD1L3	Q7Z443	1732 aa		18.32	■□□□□ 0.52
POLE-222	ENST00000545015	IGSF1	Q8N6C5	1336 aa		18.32	■□□□□ 0.52
POLE-222	ENST00000545015	PRIM1	P49642	420 aa	Known RBP	18.31	■□□□□ 0.52
POLE-222	ENST00000545015	CYP27B1	O15528	508 aa		18.3	■□□□□ 0.52
POLE-222	ENST00000545015	NKX1-1	Q15270	411 aa	Predicted RBP	18.3	■□□□□ 0.52
POLE-222	ENST00000545015	SLC27A3	Q5K4L6	730 aa		18.3	■□□□□ 0.52
POLE-222	ENST00000545015	PAPPA	Q13219	1627 aa		18.29	■□□□□ 0.52
POLE-222	ENST00000545015	DOT1L	Q8TEK3	1739 aa		18.29	■□□□□ 0.52
POLE-222	ENST00000545015	SLC15A2	Q16348	729 aa		18.28	■□□□□ 0.52
POLE-222	ENST00000545015	SPG7	Q9UQ90	795 aa		18.28	■□□□□ 0.52
POLE-222	ENST00000545015	STK32B	Q9NY57	414 aa		18.27	■□□□□ 0.52
POLE-222	ENST00000545015	LRRC4B	Q9NT99	713 aa		18.26	■□□□□ 0.51
POLE-222	ENST00000545015	CASZ1	Q86V15	1759 aa		18.25	■□□□□ 0.51
POLE-222	ENST00000545015	SYTL4	Q96C24	671 aa	Predicted RBP	18.25	■□□□□ 0.51
POLE-222	ENST00000545015	IL13	P35225	146 aa		18.24	■□□□□ 0.51
POLE-222	ENST00000545015	KDR	P35968	1356 aa		18.24	■□□□□ 0.51
POLE-222	ENST00000545015	LY75	O60449	1722 aa		18.23	■□□□□ 0.51
POLE-222	ENST00000545015	PHKG2	P15735	406 aa		18.23	■□□□□ 0.51
POLE-222	ENST00000545015	SPON1	Q9HCB6	807 aa		18.23	■□□□□ 0.51
POLE-222	ENST00000545015	MTHFS	P49914	203 aa		18.22	■□□□□ 0.51
POLE-222	ENST00000545015	IFNL2	Q8IZJ0	200 aa		18.22	■□□□□ 0.51
POLE-222	ENST00000545015	AKT1S1	Q96B36	256 aa		18.22	■□□□□ 0.51
POLE-222	ENST00000545015	KAT6B	Q8WYB5	2073 aa		18.21	■□□□□ 0.51
POLE-222	ENST00000545015	HMGB2	P26583	209 aa	Known RBP	18.21	■□□□□ 0.51
POLE-222	ENST00000545015	TOGARAM1	Q9Y4F4	1720 aa		18.2	■□□□□ 0.5
POLE-222	ENST00000545015	ZNF827	Q17R98	1081 aa		18.2	■□□□□ 0.5
POLE-222	ENST00000545015	AMOT	Q4VCS5	1084 aa		18.2	■□□□□ 0.5
POLE-222	ENST00000545015	PLEKHO1	Q53GL0	409 aa	Predicted RBP	18.19	■□□□□ 0.5
POLE-222	ENST00000545015	CC2D1B	Q5T0F9	858 aa	Known RBP	18.19	■□□□□ 0.5
POLE-222	ENST00000545015	PDGFD	Q9GZP0	370 aa	Predicted RBP	18.19	■□□□□ 0.5
POLE-222	ENST00000545015	MPRIP	Q6WCQ1	1025 aa		18.18	■□□□□ 0.5
POLE-222	ENST00000545015	PIGB	Q92521	554 aa		18.18	■□□□□ 0.5
POLE-222	ENST00000545015	SMARCC1	Q92922	1105 aa	Predicted RBP	18.18	■□□□□ 0.5
POLE-222	ENST00000545015	PALLD	Q8WX93	1383 aa		18.17	■□□□□ 0.5
POLE-222	ENST00000545015	HSP90AB1	P08238	724 aa	Known RBP	18.17	■□□□□ 0.5
POLE-222	ENST00000545015	AEBP1	Q8IUX7	1158 aa		18.17	■□□□□ 0.5
POLE-222	ENST00000545015	CCNL1	Q9UK58	526 aa	Predicted RBP	18.17	■□□□□ 0.5
POLE-222	ENST00000545015	QSER1	Q2KHR3	1735 aa		18.16	■□□□□ 0.5
POLE-222	ENST00000545015	SULT6B1	Q6IMI4	303 aa		18.16	■□□□□ 0.5
POLE-222	ENST00000545015	DCAF5	Q96JK2	942 aa		18.16	■□□□□ 0.5
POLE-222	ENST00000545015	MTFR1L	Q9H019	292 aa		18.16	■□□□□ 0.5
POLE-222	ENST00000545015	ITGB4	P16144	1822 aa		18.15	■□□□□ 0.5
POLE-222	ENST00000545015	ERVV-2	B6SEH9	535 aa		18.15	■□□□□ 0.5
POLE-222	ENST00000545015	PTGER2	P43116	358 aa		18.15	■□□□□ 0.5
POLE-222	ENST00000545015	SLC16A10	Q8TF71	515 aa		18.15	■□□□□ 0.5
POLE-222	ENST00000545015	SGIP1	Q9BQI5	828 aa		18.15	■□□□□ 0.5
POLE-222	ENST00000545015	COL3A1	P02461	1466 aa	Predicted RBP	18.14	■□□□□ 0.5
POLE-222	ENST00000545015	TMOD3	Q9NYL9	352 aa		18.14	■□□□□ 0.49
POLE-222	ENST00000545015	DIAPH1	O60610	1272 aa	Known RBP	18.13	■□□□□ 0.49
POLE-222	ENST00000545015	ZBTB7A	O95365	584 aa		18.13	■□□□□ 0.49
POLE-222	ENST00000545015	KCNQ4	P56696	695 aa		18.13	■□□□□ 0.49
POLE-222	ENST00000545015	ZNF530	Q6P9A1	599 aa	Predicted RBP	18.13	■□□□□ 0.49
POLE-222	ENST00000545015	PNPLA7	Q6ZV29	1317 aa		18.13	■□□□□ 0.49
POLE-222	ENST00000545015	KDM6A	O15550	1401 aa	Predicted RBP	18.12	■□□□□ 0.49
POLE-222	ENST00000545015	TFCP2L1	Q9NZI6	479 aa		18.11	■□□□□ 0.49
POLE-222	ENST00000545015	PPP1R1B	Q9UD71	204 aa	Predicted RBP	18.1	■□□□□ 0.49
POLE-222	ENST00000545015	LOC102724428	A0A0B4J2F2	783 aa		18.09	■□□□□ 0.49
POLE-222	ENST00000545015	SIK1	P57059	783 aa		18.09	■□□□□ 0.49
POLE-222	ENST00000545015	C1orf141	Q5JVX7	400 aa		18.09	■□□□□ 0.49
POLE-222	ENST00000545015	ATG3	Q9NT62	314 aa		18.09	■□□□□ 0.49
POLE-222	ENST00000545015	ASAP1	Q9ULH1	1129 aa		18.09	■□□□□ 0.49
POLE-222	ENST00000545015	ATF5	Q9Y2D1	282 aa	Predicted RBP	18.09	■□□□□ 0.49
POLE-222	ENST00000545015	C5	P01031	1676 aa		18.09	■□□□□ 0.49
POLE-222	ENST00000545015	AKAP4	Q5JQC9	854 aa		18.08	■□□□□ 0.48
POLE-222	ENST00000545015	COL24A1	Q17RW2	1714 aa		18.08	■□□□□ 0.48
POLE-222	ENST00000545015	TAF1L	Q8IZX4	1826 aa		18.07	■□□□□ 0.48
POLE-222	ENST00000545015	FLAD1	Q8NFF5	587 aa		18.07	■□□□□ 0.48
POLE-222	ENST00000545015	TUBGCP6	Q96RT7	1819 aa		18.07	■□□□□ 0.48
POLE-222	ENST00000545015	MAP3K5	Q99683	1374 aa		18.06	■□□□□ 0.48
POLE-222	ENST00000545015	ZNF831	Q5JPB2	1677 aa		18.06	■□□□□ 0.48
POLE-222	ENST00000545015	HMOX1	P09601	288 aa		18.06	■□□□□ 0.48
POLE-222	ENST00000545015	PPP2R1A	P30153	589 aa		18.05	■□□□□ 0.48
POLE-222	ENST00000545015	CABP4	P57796	275 aa		18.05	■□□□□ 0.48
POLE-222	ENST00000545015	COL23A1	Q86Y22	540 aa	Predicted RBP	18.05	■□□□□ 0.48
POLE-222	ENST00000545015	CFAP53	Q96M91	514 aa		18.05	■□□□□ 0.48
POLE-222	ENST00000545015	C4B	P0C0L5	1744 aa		18.05	■□□□□ 0.48
POLE-222	ENST00000545015	MRC1	P22897	1456 aa		18.03	■□□□□ 0.48

Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms