RNA–Protein interactions for RNA: ENST00000544872.1

CIT-216, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 524 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-216ENST00000544872 COG3Q96JB2 828 aa13.02□□□□□ -0.33
CIT-216ENST00000544872 TRPM3Q9HCF6 1732 aaPredicted RBP13.02□□□□□ -0.33
CIT-216ENST00000544872 ZBTB7CA1YPR0 619 aa13.01□□□□□ -0.33
CIT-216ENST00000544872 CTCFP49711 727 aaPredicted RBP13.01□□□□□ -0.33
CIT-216ENST00000544872 RGS19P49795 217 aa13.01□□□□□ -0.33
CIT-216ENST00000544872 AKT1S1Q96B36 256 aa13.01□□□□□ -0.33
CIT-216ENST00000544872 ACSBG1Q96GR2 724 aa13.01□□□□□ -0.33
CIT-216ENST00000544872 KNSTRNQ9Y448 316 aa13.01□□□□□ -0.33
CIT-216ENST00000544872 PDE4DIPQ5VU43 2346 aa13□□□□□ -0.33
CIT-216ENST00000544872 USP6P35125 1406 aa13□□□□□ -0.33
CIT-216ENST00000544872 ANKRD36BQ8N2N9 1353 aa13□□□□□ -0.33
CIT-216ENST00000544872 IGSF1Q8N6C5 1336 aa13□□□□□ -0.33
CIT-216ENST00000544872 LRRC37A3O60309 1634 aa12.99□□□□□ -0.33
CIT-216ENST00000544872 CRB1P82279 1406 aa12.99□□□□□ -0.33
CIT-216ENST00000544872 CGNL1Q0VF96 1302 aa12.99□□□□□ -0.33
CIT-216ENST00000544872 TOM1L2Q6ZVM7 507 aa12.99□□□□□ -0.33
CIT-216ENST00000544872 LRRC4BQ9NT99 713 aa12.99□□□□□ -0.33
CIT-216ENST00000544872 PAPPAQ13219 1627 aa12.99□□□□□ -0.33
CIT-216ENST00000544872 BCL9O00512 1426 aa12.98□□□□□ -0.33
CIT-216ENST00000544872 EDC4Q6P2E9 1401 aaKnown RBP12.98□□□□□ -0.33
CIT-216ENST00000544872 GCP02774 474 aa12.98□□□□□ -0.33
CIT-216ENST00000544872 PANK3Q9H999 370 aa12.98□□□□□ -0.33
CIT-216ENST00000544872 CRYBG1Q9Y4K1 1723 aa12.98□□□□□ -0.33
CIT-216ENST00000544872 CPSF1Q10570 1443 aaKnown RBP12.97□□□□□ -0.33
CIT-216ENST00000544872 A0A1W2PP64 1363 aa12.96□□□□□ -0.33
CIT-216ENST00000544872 KDM2BQ8NHM5 1336 aa12.96□□□□□ -0.33
CIT-216ENST00000544872 SOX12O15370 315 aa12.96□□□□□ -0.33
CIT-216ENST00000544872 LBX1P52954 281 aa12.96□□□□□ -0.33
CIT-216ENST00000544872 RRAGCQ9HB90 399 aa12.96□□□□□ -0.33
CIT-216ENST00000544872 KIF7Q2M1P5 1343 aa12.95□□□□□ -0.34
CIT-216ENST00000544872 AKAP12Q02952 1782 aa12.95□□□□□ -0.34
CIT-216ENST00000544872 EXOC5O00471 708 aa12.95□□□□□ -0.34
CIT-216ENST00000544872 NME9Q86XW9 330 aa12.95□□□□□ -0.34
CIT-216ENST00000544872 CDCA7Q9BWT1 371 aaPredicted RBP12.95□□□□□ -0.34
CIT-216ENST00000544872 MKRN1Q9UHC7 482 aaKnown RBP12.95□□□□□ -0.34
CIT-216ENST00000544872 ITSN1Q15811 1721 aa12.95□□□□□ -0.34
CIT-216ENST00000544872 COL24A1Q17RW2 1714 aa12.95□□□□□ -0.34
CIT-216ENST00000544872 PHRF1Q9P1Y6 1649 aaKnown RBP12.95□□□□□ -0.34
CIT-216ENST00000544872 COL5A2P05997 1499 aaPredicted RBP12.93□□□□□ -0.34
CIT-216ENST00000544872 SLC27A3Q5K4L6 730 aa12.93□□□□□ -0.34
CIT-216ENST00000544872 ARHGAP27Q6ZUM4 889 aa12.93□□□□□ -0.34
CIT-216ENST00000544872 KAT6BQ8WYB5 2073 aa12.92□□□□□ -0.34
CIT-216ENST00000544872 FYB1O15117 783 aa12.92□□□□□ -0.34
CIT-216ENST00000544872 AMPHP49418 695 aa12.92□□□□□ -0.34
CIT-216ENST00000544872 MORC1Q86VD1 984 aa12.92□□□□□ -0.34
CIT-216ENST00000544872 GGNBP2Q9H3C7 697 aa12.92□□□□□ -0.34
CIT-216ENST00000544872 CCDC7Q96M83 1385 aa12.92□□□□□ -0.34
CIT-216ENST00000544872 CSB-PGBD3P0DP91 1061 aa12.91□□□□□ -0.34
CIT-216ENST00000544872 USP31Q70CQ4 1352 aa12.91□□□□□ -0.34
CIT-216ENST00000544872 NSD3Q9BZ95 1437 aa12.9□□□□□ -0.34
CIT-216ENST00000544872 KCNQ4P56696 695 aa12.9□□□□□ -0.34
CIT-216ENST00000544872 COL23A1Q86Y22 540 aaPredicted RBP12.9□□□□□ -0.34
CIT-216ENST00000544872 CARD14Q9BXL6 1004 aa12.9□□□□□ -0.34
CIT-216ENST00000544872 CPDO75976 1380 aa12.9□□□□□ -0.34
CIT-216ENST00000544872 WASHC2AQ641Q2 1341 aa12.89□□□□□ -0.35
CIT-216ENST00000544872 QSER1Q2KHR3 1735 aa12.89□□□□□ -0.35
CIT-216ENST00000544872 C9orf131Q5VYM1 1079 aa12.89□□□□□ -0.35
CIT-216ENST00000544872 KCPQ6ZWJ8 1503 aa12.88□□□□□ -0.35
CIT-216ENST00000544872 ARHGEF25Q86VW2 580 aa12.88□□□□□ -0.35
CIT-216ENST00000544872 BCS1LQ9Y276 419 aa12.88□□□□□ -0.35
CIT-216ENST00000544872 NSD2O96028 1365 aa12.88□□□□□ -0.35
CIT-216ENST00000544872 PLEKHG2Q9H7P9 1386 aa12.88□□□□□ -0.35
CIT-216ENST00000544872 LMO7Q8WWI1 1683 aa12.88□□□□□ -0.35
CIT-216ENST00000544872 PPM1GO15355 546 aaPredicted RBP12.87□□□□□ -0.35
CIT-216ENST00000544872 NHSQ6T4R5 1651 aa12.86□□□□□ -0.35
CIT-216ENST00000544872 CD163L1Q9NR16 1453 aa12.86□□□□□ -0.35
CIT-216ENST00000544872 ZNF316A6NFI3 1004 aaPredicted RBP12.86□□□□□ -0.35
CIT-216ENST00000544872 TNNT2P45379 298 aaPredicted RBP12.85□□□□□ -0.35
CIT-216ENST00000544872 PRPF38BQ5VTL8 546 aaKnown RBP12.85□□□□□ -0.35
CIT-216ENST00000544872 C10orf71Q711Q0 1435 aa12.85□□□□□ -0.35
CIT-216ENST00000544872 CICQ96RK0 1608 aaPredicted RBP12.84□□□□□ -0.35
CIT-216ENST00000544872 TUBGCP6Q96RT7 1819 aa12.84□□□□□ -0.35
CIT-216ENST00000544872 CNGB1Q14028 1251 aaPredicted RBP12.84□□□□□ -0.35
CIT-216ENST00000544872 CC2D1BQ5T0F9 858 aaKnown RBP12.84□□□□□ -0.35
CIT-216ENST00000544872 IP6K1Q92551 441 aa12.84□□□□□ -0.35
CIT-216ENST00000544872 BTAF1O14981 1849 aa12.83□□□□□ -0.35
CIT-216ENST00000544872 DDX10Q13206 875 aaKnown RBP12.83□□□□□ -0.36
CIT-216ENST00000544872 CREBZFQ9NS37 354 aa12.83□□□□□ -0.36
CIT-216ENST00000544872 NLRP2Q9NX02 1062 aa12.83□□□□□ -0.36
CIT-216ENST00000544872 HSPA8P11142 646 aaKnown RBP12.82□□□□□ -0.36
CIT-216ENST00000544872 RNF181Q9P0P0 153 aa12.82□□□□□ -0.36
CIT-216ENST00000544872 WDR17Q8IZU2 1322 aa12.82□□□□□ -0.36
CIT-216ENST00000544872 SMG6Q86US8 1419 aaKnown RBP12.81□□□□□ -0.36
CIT-216ENST00000544872 PXDNLA1KZ92 1463 aa12.81□□□□□ -0.36
CIT-216ENST00000544872 RRS1Q15050 365 aaKnown RBP12.81□□□□□ -0.36
CIT-216ENST00000544872 ANKRD24Q8TF21 1146 aa12.81□□□□□ -0.36
CIT-216ENST00000544872 LTV1Q96GA3 475 aaPredicted RBP12.81□□□□□ -0.36
CIT-216ENST00000544872 CFAP53Q96M91 514 aa12.81□□□□□ -0.36
CIT-216ENST00000544872 WBP1LQ9NX94 342 aa12.81□□□□□ -0.36
CIT-216ENST00000544872 MAP3K19Q56UN5 1328 aa12.81□□□□□ -0.36
CIT-216ENST00000544872 KIF24Q5T7B8 1368 aa12.81□□□□□ -0.36
CIT-216ENST00000544872 PER1O15534 1290 aaPredicted RBP12.8□□□□□ -0.36
CIT-216ENST00000544872 HOXC9P31274 260 aa12.8□□□□□ -0.36
CIT-216ENST00000544872 AMER1Q5JTC6 1135 aaPredicted RBP12.8□□□□□ -0.36
CIT-216ENST00000544872 SYTL4Q96C24 671 aaPredicted RBP12.8□□□□□ -0.36
CIT-216ENST00000544872 CCNL1Q9UK58 526 aaPredicted RBP12.8□□□□□ -0.36
CIT-216ENST00000544872 FCHSD2O94868 740 aa12.79□□□□□ -0.36
CIT-216ENST00000544872 VEGFAP15692 232 aaPredicted RBP12.79□□□□□ -0.36
CIT-216ENST00000544872 CARD10Q9BWT7 1032 aa12.79□□□□□ -0.36
CIT-216ENST00000544872 RTL1A6NKG5 1358 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms