RNA–Protein interactions for RNA: ENST00000544299.5

CHERP-202, Transcript of calcium homeostasis endoplasmic reticulum protein, humanhuman

TSL 2

Gene CHERP, Length 1,755 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHERP-202ENST00000544299 PLIN1O60240 522 aa23.47■■□□□ 1.35
CHERP-202ENST00000544299 CFAP44Q96MT7 982 aa23.47■■□□□ 1.35
CHERP-202ENST00000544299 HTATSF1O43719 755 aaKnown RBP23.47■■□□□ 1.35
CHERP-202ENST00000544299 MBIPQ9NS73 344 aa23.47■■□□□ 1.35
CHERP-202ENST00000544299 NLRP2Q9NX02 1062 aa23.47■■□□□ 1.35
CHERP-202ENST00000544299 LAS1LQ9Y4W2 734 aaKnown RBP23.47■■□□□ 1.35
CHERP-202ENST00000544299 BCAR3O75815 825 aa23.46■■□□□ 1.35
CHERP-202ENST00000544299 CT47B1P0C2W7 299 aaPredicted RBP23.46■■□□□ 1.35
CHERP-202ENST00000544299 RARSP54136 660 aaKnown RBP23.46■■□□□ 1.35
CHERP-202ENST00000544299 PIP4K2BP78356 416 aa23.46■■□□□ 1.35
CHERP-202ENST00000544299 UBAP1LF5GYI3 381 aa23.45■■□□□ 1.34
CHERP-202ENST00000544299 GNAT3A8MTJ3 354 aa23.45■■□□□ 1.34
CHERP-202ENST00000544299 MEGF6O75095 1541 aa23.45■■□□□ 1.34
CHERP-202ENST00000544299 CSB-PGBD3P0DP91 1061 aa23.44■■□□□ 1.34
CHERP-202ENST00000544299 WDR17Q8IZU2 1322 aa23.43■■□□□ 1.34
CHERP-202ENST00000544299 RTF1Q92541 710 aaKnown RBP23.43■■□□□ 1.34
CHERP-202ENST00000544299 COL14A1Q05707 1796 aaKnown RBP23.43■■□□□ 1.34
CHERP-202ENST00000544299 CHL1O00533 1208 aa23.42■■□□□ 1.34
CHERP-202ENST00000544299 PLEKHO1Q53GL0 409 aaPredicted RBP23.42■■□□□ 1.34
CHERP-202ENST00000544299 IL17REQ8NFR9 667 aa23.42■■□□□ 1.34
CHERP-202ENST00000544299 AMOTQ4VCS5 1084 aa23.41■■□□□ 1.34
CHERP-202ENST00000544299 ZNF530Q6P9A1 599 aaPredicted RBP23.4■■□□□ 1.34
CHERP-202ENST00000544299 CEMIPQ8WUJ3 1361 aa23.4■■□□□ 1.34
CHERP-202ENST00000544299 PLEKHG2Q9H7P9 1386 aa23.4■■□□□ 1.34
CHERP-202ENST00000544299 PKD1L3Q7Z443 1732 aa23.4■■□□□ 1.34
CHERP-202ENST00000544299 C20orf194Q5TEA3 1177 aa23.4■■□□□ 1.34
CHERP-202ENST00000544299 CERKQ8TCT0 537 aa23.39■■□□□ 1.33
CHERP-202ENST00000544299 ADAMTS7Q9UKP4 1686 aa23.39■■□□□ 1.33
CHERP-202ENST00000544299 VIRMAQ69YN4 1812 aaKnown RBP23.39■■□□□ 1.33
CHERP-202ENST00000544299 AKAP4Q5JQC9 854 aa23.38■■□□□ 1.33
CHERP-202ENST00000544299 TSPYL6Q8N831 410 aa23.37■■□□□ 1.33
CHERP-202ENST00000544299 RAPGEF4Q8WZA2 1011 aa23.37■■□□□ 1.33
CHERP-202ENST00000544299 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.37■■□□□ 1.33
CHERP-202ENST00000544299 VAMP4O75379 141 aa23.36■■□□□ 1.33
CHERP-202ENST00000544299 TATP17735 454 aaPredicted RBP23.36■■□□□ 1.33
CHERP-202ENST00000544299 C8orf58Q8NAV2 365 aa23.36■■□□□ 1.33
CHERP-202ENST00000544299 EXOC6Q8TAG9 804 aa23.36■■□□□ 1.33
CHERP-202ENST00000544299 BCL2L13Q9BXK5 485 aa23.36■■□□□ 1.33
CHERP-202ENST00000544299 PARP4Q9UKK3 1724 aaKnown RBP23.36■■□□□ 1.33
CHERP-202ENST00000544299 SSH1Q8WYL5 1049 aa23.35■■□□□ 1.33
CHERP-202ENST00000544299 OVOS2A0A0G2JMS6 1433 aa23.35■■□□□ 1.33
CHERP-202ENST00000544299 LARP1Q6PKG0 1096 aaKnown RBP23.35■■□□□ 1.33
CHERP-202ENST00000544299 CARD10Q9BWT7 1032 aa23.35■■□□□ 1.33
CHERP-202ENST00000544299 TSHZ2Q9NRE2 1034 aa23.35■■□□□ 1.33
CHERP-202ENST00000544299 TOM1L2Q6ZVM7 507 aa23.34■■□□□ 1.33
CHERP-202ENST00000544299 CRBNQ96SW2 442 aa23.34■■□□□ 1.33
CHERP-202ENST00000544299 LGR6Q9HBX8 967 aa23.34■■□□□ 1.33
CHERP-202ENST00000544299 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.34■■□□□ 1.33
CHERP-202ENST00000544299 MIS18AQ9NYP9 233 aa23.34■■□□□ 1.33
CHERP-202ENST00000544299 PLCH1Q4KWH8 1693 aa23.34■■□□□ 1.33
CHERP-202ENST00000544299 STRN4Q9NRL3 753 aa23.33■■□□□ 1.33
CHERP-202ENST00000544299 BTG4Q9NY30 223 aa23.32■■□□□ 1.32
CHERP-202ENST00000544299 KRT24Q2M2I5 525 aa23.32■■□□□ 1.32
CHERP-202ENST00000544299 C1orf141Q5JVX7 400 aa23.32■■□□□ 1.32
CHERP-202ENST00000544299 TSPYL4Q9UJ04 414 aa23.32■■□□□ 1.32
CHERP-202ENST00000544299 SIPA1L3O60292 1781 aaPredicted RBP23.31■■□□□ 1.32
CHERP-202ENST00000544299 RNMTO43148 476 aaKnown RBP23.31■■□□□ 1.32
CHERP-202ENST00000544299 TWISTNBQ3B726 338 aaPredicted RBP23.31■■□□□ 1.32
CHERP-202ENST00000544299 ALDH1L2Q3SY69 923 aa23.31■■□□□ 1.32
CHERP-202ENST00000544299 ZNF428Q96B54 188 aa23.31■■□□□ 1.32
CHERP-202ENST00000544299 SMC4Q9NTJ3 1288 aa23.31■■□□□ 1.32
CHERP-202ENST00000544299 NRAPQ86VF7 1730 aa23.31■■□□□ 1.32
CHERP-202ENST00000544299 KDM3BQ7LBC6 1761 aa23.31■■□□□ 1.32
CHERP-202ENST00000544299 TAF7Q15545 349 aaPredicted RBP23.3■■□□□ 1.32
CHERP-202ENST00000544299 MPRIPQ6WCQ1 1025 aa23.3■■□□□ 1.32
CHERP-202ENST00000544299 BABAM1Q9NWV8 329 aa23.3■■□□□ 1.32
CHERP-202ENST00000544299 SCN11AQ9UI33 1791 aa23.3■■□□□ 1.32
CHERP-202ENST00000544299 ELL2O00472 640 aaPredicted RBP23.29■■□□□ 1.32
CHERP-202ENST00000544299 EVA1CP58658 441 aa23.29■■□□□ 1.32
CHERP-202ENST00000544299 SPG7Q9UQ90 795 aa23.29■■□□□ 1.32
CHERP-202ENST00000544299 KDM6AO15550 1401 aaPredicted RBP23.29■■□□□ 1.32
CHERP-202ENST00000544299 TNNQ9UQP3 1299 aa23.29■■□□□ 1.32
CHERP-202ENST00000544299 SHANK3Q9BYB0 1731 aa23.29■■□□□ 1.32
CHERP-202ENST00000544299 PHKG2P15735 406 aa23.28■■□□□ 1.32
CHERP-202ENST00000544299 FRAT1Q92837 279 aaPredicted RBP23.28■■□□□ 1.32
CHERP-202ENST00000544299 BRPF1P55201 1214 aaPredicted RBP23.27■■□□□ 1.32
CHERP-202ENST00000544299 PDE3AQ14432 1141 aa23.27■■□□□ 1.32
CHERP-202ENST00000544299 CYP27B1O15528 508 aa23.27■■□□□ 1.32
CHERP-202ENST00000544299 ADAMTS2O95450 1211 aa23.26■■□□□ 1.31
CHERP-202ENST00000544299 MRPL50Q8N5N7 158 aaKnown RBP23.26■■□□□ 1.31
CHERP-202ENST00000544299 JCADQ9P266 1359 aa23.25■■□□□ 1.31
CHERP-202ENST00000544299 CANXP27824 592 aaKnown RBP23.25■■□□□ 1.31
CHERP-202ENST00000544299 B4GALNT3Q6L9W6 998 aa23.25■■□□□ 1.31
CHERP-202ENST00000544299 PANK1Q8TE04 598 aa23.24■■□□□ 1.31
CHERP-202ENST00000544299 NUTM2BA6NNL0 878 aaPredicted RBP23.24■■□□□ 1.31
CHERP-202ENST00000544299 NUTM2EB1AL46 878 aaPredicted RBP23.24■■□□□ 1.31
CHERP-202ENST00000544299 RLBP1P12271 317 aa23.24■■□□□ 1.31
CHERP-202ENST00000544299 IL2RBP14784 551 aa23.24■■□□□ 1.31
CHERP-202ENST00000544299 ZKSCAN2Q63HK3 967 aa23.24■■□□□ 1.31
CHERP-202ENST00000544299 NUTM2AQ8IVF1 878 aaPredicted RBP23.24■■□□□ 1.31
CHERP-202ENST00000544299 IFNL2Q8IZJ0 200 aa23.24■■□□□ 1.31
CHERP-202ENST00000544299 MRC1P22897 1456 aa23.23■■□□□ 1.31
CHERP-202ENST00000544299 DISP2A7MBM2 1401 aa23.23■■□□□ 1.31
CHERP-202ENST00000544299 NWD2Q9ULI1 1742 aa23.23■■□□□ 1.31
CHERP-202ENST00000544299 NOB1Q9ULX3 412 aaKnown RBP23.23■■□□□ 1.31
CHERP-202ENST00000544299 WNK3Q9BYP7 1800 aa23.23■■□□□ 1.31
CHERP-202ENST00000544299 KIF16BQ96L93 1317 aa23.22■■□□□ 1.31
CHERP-202ENST00000544299 SLIT2O94813 1529 aa23.22■■□□□ 1.31
CHERP-202ENST00000544299 TEFQ10587 303 aa23.22■■□□□ 1.31
CHERP-202ENST00000544299 TCERG1O14776 1098 aaKnown RBP23.21■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms