RNA–Protein interactions for RNA: ENST00000544293.1

C2CD3-220, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 2

Gene C2CD3, Length 731 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-220ENST00000544293 AKAP12Q02952 1782 aa13.55□□□□□ -0.24
C2CD3-220ENST00000544293 HOXC9P31274 260 aa13.55□□□□□ -0.24
C2CD3-220ENST00000544293 AMIGO3Q86WK7 504 aa13.55□□□□□ -0.24
C2CD3-220ENST00000544293 SYTL4Q96C24 671 aaPredicted RBP13.55□□□□□ -0.24
C2CD3-220ENST00000544293 MAP3K19Q56UN5 1328 aa13.55□□□□□ -0.24
C2CD3-220ENST00000544293 A0A1W2PP64 1363 aa13.55□□□□□ -0.24
C2CD3-220ENST00000544293 GRIN3BO60391 1043 aa13.54□□□□□ -0.24
C2CD3-220ENST00000544293 NBPF6Q5VWK0 638 aa13.54□□□□□ -0.24
C2CD3-220ENST00000544293 ZCRB1Q8TBF4 217 aaKnown RBP13.54□□□□□ -0.24
C2CD3-220ENST00000544293 NBPF4Q96M43 638 aa13.54□□□□□ -0.24
C2CD3-220ENST00000544293 CCNL1Q9UK58 526 aaPredicted RBP13.54□□□□□ -0.24
C2CD3-220ENST00000544293 SHANK3Q9BYB0 1731 aa13.53□□□□□ -0.24
C2CD3-220ENST00000544293 CEP350Q5VT06 3117 aa13.53□□□□□ -0.24
C2CD3-220ENST00000544293 BTAF1O14981 1849 aa13.53□□□□□ -0.24
C2CD3-220ENST00000544293 MSL1Q68DK7 614 aa13.53□□□□□ -0.24
C2CD3-220ENST00000544293 HDGFL2Q7Z4V5 671 aaPredicted RBP13.53□□□□□ -0.24
C2CD3-220ENST00000544293 PUS7Q96PZ0 661 aaKnown RBP13.53□□□□□ -0.24
C2CD3-220ENST00000544293 EDC4Q6P2E9 1401 aaKnown RBP13.53□□□□□ -0.24
C2CD3-220ENST00000544293 COL24A1Q17RW2 1714 aa13.53□□□□□ -0.24
C2CD3-220ENST00000544293 SMIM5Q71RC9 77 aa13.52□□□□□ -0.25
C2CD3-220ENST00000544293 MEGF6O75095 1541 aa13.51□□□□□ -0.25
C2CD3-220ENST00000544293 TESK2Q96S53 571 aa13.51□□□□□ -0.25
C2CD3-220ENST00000544293 CARD11Q9BXL7 1154 aa13.51□□□□□ -0.25
C2CD3-220ENST00000544293 USP54Q70EL1 1684 aa13.5□□□□□ -0.25
C2CD3-220ENST00000544293 ATP10DQ9P241 1426 aa13.5□□□□□ -0.25
C2CD3-220ENST00000544293 RNF216Q9NWF9 866 aaPredicted RBP13.5□□□□□ -0.25
C2CD3-220ENST00000544293 TERF2IPQ9NYB0 399 aa13.5□□□□□ -0.25
C2CD3-220ENST00000544293 CD2APQ9Y5K6 639 aa13.5□□□□□ -0.25
C2CD3-220ENST00000544293 CHD4Q14839 1912 aa13.5□□□□□ -0.25
C2CD3-220ENST00000544293 ADCY9O60503 1353 aa13.49□□□□□ -0.25
C2CD3-220ENST00000544293 USHBP1Q8N6Y0 703 aa13.49□□□□□ -0.25
C2CD3-220ENST00000544293 MON2Q7Z3U7 1717 aa13.49□□□□□ -0.25
C2CD3-220ENST00000544293 RRS1Q15050 365 aaKnown RBP13.48□□□□□ -0.25
C2CD3-220ENST00000544293 FYB1O15117 783 aa13.47□□□□□ -0.25
C2CD3-220ENST00000544293 AMPHP49418 695 aa13.47□□□□□ -0.25
C2CD3-220ENST00000544293 COG3Q96JB2 828 aa13.47□□□□□ -0.25
C2CD3-220ENST00000544293 USP47Q96K76 1375 aa13.46□□□□□ -0.25
C2CD3-220ENST00000544293 CYP27B1O15528 508 aa13.46□□□□□ -0.25
C2CD3-220ENST00000544293 HSPA6P17066 643 aa13.46□□□□□ -0.25
C2CD3-220ENST00000544293 HSP90AB2PQ58FF8 381 aa13.46□□□□□ -0.25
C2CD3-220ENST00000544293 FAM208AQ9UK61 1670 aaKnown RBP13.45□□□□□ -0.26
C2CD3-220ENST00000544293 KIF3CO14782 793 aa13.45□□□□□ -0.26
C2CD3-220ENST00000544293 GPBP1L1Q9HC44 474 aaPredicted RBP13.45□□□□□ -0.26
C2CD3-220ENST00000544293 ST20-MTHFSA0A0A6YYL1 179 aa13.44□□□□□ -0.26
C2CD3-220ENST00000544293 WWC3Q9ULE0 1092 aa13.44□□□□□ -0.26
C2CD3-220ENST00000544293 QSER1Q2KHR3 1735 aa13.44□□□□□ -0.26
C2CD3-220ENST00000544293 CGNL1Q0VF96 1302 aa13.43□□□□□ -0.26
C2CD3-220ENST00000544293 MPRIPQ6WCQ1 1025 aa13.43□□□□□ -0.26
C2CD3-220ENST00000544293 ZNF526Q8TF50 670 aaPredicted RBP13.43□□□□□ -0.26
C2CD3-220ENST00000544293 PIGBQ92521 554 aa13.43□□□□□ -0.26
C2CD3-220ENST00000544293 GGNBP2Q9H3C7 697 aa13.43□□□□□ -0.26
C2CD3-220ENST00000544293 PALLDQ8WX93 1383 aa13.43□□□□□ -0.26
C2CD3-220ENST00000544293 LY75O60449 1722 aa13.42□□□□□ -0.26
C2CD3-220ENST00000544293 TUBGCP6Q96RT7 1819 aa13.42□□□□□ -0.26
C2CD3-220ENST00000544293 FLAD1Q8NFF5 587 aa13.42□□□□□ -0.26
C2CD3-220ENST00000544293 LTN1O94822 1766 aa13.42□□□□□ -0.26
C2CD3-220ENST00000544293 IGSF1Q8N6C5 1336 aa13.41□□□□□ -0.26
C2CD3-220ENST00000544293 NKX1-1Q15270 411 aaPredicted RBP13.41□□□□□ -0.26
C2CD3-220ENST00000544293 DNAJC5GQ8N7S2 189 aa13.41□□□□□ -0.26
C2CD3-220ENST00000544293 LINC00116Q8NCU8 138 aa13.41□□□□□ -0.26
C2CD3-220ENST00000544293 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.4□□□□□ -0.26
C2CD3-220ENST00000544293 TATP17735 454 aaPredicted RBP13.4□□□□□ -0.26
C2CD3-220ENST00000544293 ITPK1Q13572 414 aa13.4□□□□□ -0.26
C2CD3-220ENST00000544293 RAPGEF4Q8WZA2 1011 aa13.4□□□□□ -0.26
C2CD3-220ENST00000544293 RTL1A6NKG5 1358 aa13.4□□□□□ -0.26
C2CD3-220ENST00000544293 KAT6BQ8WYB5 2073 aa13.4□□□□□ -0.27
C2CD3-220ENST00000544293 HOXD11P31277 338 aaPredicted RBP13.39□□□□□ -0.27
C2CD3-220ENST00000544293 INSRP06213 1382 aa13.38□□□□□ -0.27
C2CD3-220ENST00000544293 PHF14O94880 888 aa13.38□□□□□ -0.27
C2CD3-220ENST00000544293 CARD14Q9BXL6 1004 aa13.38□□□□□ -0.27
C2CD3-220ENST00000544293 DOT1LQ8TEK3 1739 aa13.38□□□□□ -0.27
C2CD3-220ENST00000544293 PCDH11XQ9BZA7 1347 aa13.38□□□□□ -0.27
C2CD3-220ENST00000544293 PCDH11YQ9BZA8 1340 aa13.38□□□□□ -0.27
C2CD3-220ENST00000544293 LOC102724428A0A0B4J2F2 783 aa13.37□□□□□ -0.27
C2CD3-220ENST00000544293 SIK1P57059 783 aa13.37□□□□□ -0.27
C2CD3-220ENST00000544293 ASAP1Q9ULH1 1129 aa13.37□□□□□ -0.27
C2CD3-220ENST00000544293 SSFA2P28290 1259 aa13.36□□□□□ -0.27
C2CD3-220ENST00000544293 SMARCC1Q92922 1105 aaPredicted RBP13.36□□□□□ -0.27
C2CD3-220ENST00000544293 AK7Q96M32 723 aa13.36□□□□□ -0.27
C2CD3-220ENST00000544293 SLC4A9Q96Q91 983 aa13.36□□□□□ -0.27
C2CD3-220ENST00000544293 EMILIN1Q9Y6C2 1016 aa13.36□□□□□ -0.27
C2CD3-220ENST00000544293 ATG3Q9NT62 314 aa13.35□□□□□ -0.27
C2CD3-220ENST00000544293 NCAPD2Q15021 1401 aa13.34□□□□□ -0.27
C2CD3-220ENST00000544293 RGPD2P0DJD1 1756 aa13.34□□□□□ -0.27
C2CD3-220ENST00000544293 MMP10P09238 476 aa13.33□□□□□ -0.28
C2CD3-220ENST00000544293 EYA1Q99502 592 aa13.33□□□□□ -0.28
C2CD3-220ENST00000544293 TOGARAM1Q9Y4F4 1720 aa13.33□□□□□ -0.28
C2CD3-220ENST00000544293 FLT4P35916 1363 aa13.32□□□□□ -0.28
C2CD3-220ENST00000544293 NSD3Q9BZ95 1437 aa13.32□□□□□ -0.28
C2CD3-220ENST00000544293 A0A0G2JLW4 131 aa13.32□□□□□ -0.28
C2CD3-220ENST00000544293 KCNA3P22001 575 aa13.32□□□□□ -0.28
C2CD3-220ENST00000544293 HMGB2P26583 209 aaKnown RBP13.32□□□□□ -0.28
C2CD3-220ENST00000544293 KIF24Q5T7B8 1368 aa13.32□□□□□ -0.28
C2CD3-220ENST00000544293 PXDNLA1KZ92 1463 aa13.31□□□□□ -0.28
C2CD3-220ENST00000544293 GNPATO15228 680 aa13.31□□□□□ -0.28
C2CD3-220ENST00000544293 TOMM70O94826 608 aa13.31□□□□□ -0.28
C2CD3-220ENST00000544293 ATP6V1AP38606 617 aa13.31□□□□□ -0.28
C2CD3-220ENST00000544293 NMRK2Q9NPI5 230 aa13.31□□□□□ -0.28
C2CD3-220ENST00000544293 TONSLQ96HA7 1378 aa13.31□□□□□ -0.28
C2CD3-220ENST00000544293 C4BP0C0L5 1744 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms