RNA–Protein interactions for RNA: ENST00000544276.1

LMO3-230, Transcript of LIM domain only 3, humanhuman

TSL 3

Gene LMO3, Length 460 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-230ENST00000544276 ADRA2BP18089 450 aa14.61□□□□□ -0.07
LMO3-230ENST00000544276 PRIM1P49642 420 aaKnown RBP14.61□□□□□ -0.07
LMO3-230ENST00000544276 PIAS4Q8N2W9 510 aaPredicted RBP14.61□□□□□ -0.07
LMO3-230ENST00000544276 RAPGEF4Q8WZA2 1011 aa14.61□□□□□ -0.07
LMO3-230ENST00000544276 AKT1S1Q96B36 256 aa14.61□□□□□ -0.07
LMO3-230ENST00000544276 PAPPAQ13219 1627 aa14.61□□□□□ -0.07
LMO3-230ENST00000544276 NSD2O96028 1365 aa14.6□□□□□ -0.07
LMO3-230ENST00000544276 ZNF827Q17R98 1081 aa14.6□□□□□ -0.07
LMO3-230ENST00000544276 HSP90AB2PQ58FF8 381 aa14.6□□□□□ -0.07
LMO3-230ENST00000544276 SLC16A10Q8TF71 515 aa14.6□□□□□ -0.07
LMO3-230ENST00000544276 ATF5Q9Y2D1 282 aaPredicted RBP14.6□□□□□ -0.07
LMO3-230ENST00000544276 NSD3Q9BZ95 1437 aa14.59□□□□□ -0.07
LMO3-230ENST00000544276 TATP17735 454 aaPredicted RBP14.59□□□□□ -0.07
LMO3-230ENST00000544276 HMGB2P26583 209 aaKnown RBP14.58□□□□□ -0.08
LMO3-230ENST00000544276 SYTL4Q96C24 671 aaPredicted RBP14.58□□□□□ -0.08
LMO3-230ENST00000544276 MAP3K5Q99683 1374 aa14.58□□□□□ -0.08
LMO3-230ENST00000544276 YY1P25490 414 aa14.57□□□□□ -0.08
LMO3-230ENST00000544276 SYT17Q9BSW7 474 aa14.57□□□□□ -0.08
LMO3-230ENST00000544276 PCDH11XQ9BZA7 1347 aa14.57□□□□□ -0.08
LMO3-230ENST00000544276 PCDH11YQ9BZA8 1340 aa14.57□□□□□ -0.08
LMO3-230ENST00000544276 BTAF1O14981 1849 aa14.57□□□□□ -0.08
LMO3-230ENST00000544276 NCAPD2Q15021 1401 aa14.57□□□□□ -0.08
LMO3-230ENST00000544276 USHBP1Q8N6Y0 703 aa14.56□□□□□ -0.08
LMO3-230ENST00000544276 ARXQ96QS3 562 aa14.56□□□□□ -0.08
LMO3-230ENST00000544276 FHDC1Q9C0D6 1143 aaPredicted RBP14.56□□□□□ -0.08
LMO3-230ENST00000544276 WASHC2AQ641Q2 1341 aa14.56□□□□□ -0.08
LMO3-230ENST00000544276 PCGF6Q9BYE7 350 aa14.55□□□□□ -0.08
LMO3-230ENST00000544276 EMILIN1Q9Y6C2 1016 aa14.55□□□□□ -0.08
LMO3-230ENST00000544276 PNPLA7Q6ZV29 1317 aa14.55□□□□□ -0.08
LMO3-230ENST00000544276 UTRNP46939 3433 aa14.55□□□□□ -0.08
LMO3-230ENST00000544276 TFCP2L1Q9NZI6 479 aa14.54□□□□□ -0.08
LMO3-230ENST00000544276 CCNL1Q9UK58 526 aaPredicted RBP14.54□□□□□ -0.08
LMO3-230ENST00000544276 MYOM1P52179 1685 aa14.53□□□□□ -0.08
LMO3-230ENST00000544276 EIF4G2P78344 907 aaKnown RBP eCLIP14.53□□□□□ -0.08
LMO3-230ENST00000544276 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.53□□□□□ -0.08
LMO3-230ENST00000544276 PLEKHG2Q9H7P9 1386 aa14.52□□□□□ -0.08
LMO3-230ENST00000544276 CYP27B1O15528 508 aa14.52□□□□□ -0.09
LMO3-230ENST00000544276 NKX1-1Q15270 411 aaPredicted RBP14.52□□□□□ -0.09
LMO3-230ENST00000544276 POLKQ9UBT6 870 aa14.52□□□□□ -0.09
LMO3-230ENST00000544276 POLD1P28340 1107 aa14.51□□□□□ -0.09
LMO3-230ENST00000544276 KCNQ4P56696 695 aa14.51□□□□□ -0.09
LMO3-230ENST00000544276 SPG7Q9UQ90 795 aa14.51□□□□□ -0.09
LMO3-230ENST00000544276 SHANK3Q9BYB0 1731 aa14.51□□□□□ -0.09
LMO3-230ENST00000544276 KIF20BQ96Q89 1820 aa14.5□□□□□ -0.09
LMO3-230ENST00000544276 PPM1GO15355 546 aaPredicted RBP14.5□□□□□ -0.09
LMO3-230ENST00000544276 SMARCC1Q92922 1105 aaPredicted RBP14.5□□□□□ -0.09
LMO3-230ENST00000544276 EYA1Q99502 592 aa14.5□□□□□ -0.09
LMO3-230ENST00000544276 DOT1LQ8TEK3 1739 aa14.49□□□□□ -0.09
LMO3-230ENST00000544276 PALLDQ8WX93 1383 aa14.48□□□□□ -0.09
LMO3-230ENST00000544276 HSPA5P11021 654 aaKnown RBP14.48□□□□□ -0.09
LMO3-230ENST00000544276 MPRIPQ6WCQ1 1025 aa14.48□□□□□ -0.09
LMO3-230ENST00000544276 FLAD1Q8NFF5 587 aa14.48□□□□□ -0.09
LMO3-230ENST00000544276 LY75O60449 1722 aa14.48□□□□□ -0.09
LMO3-230ENST00000544276 RGPD2P0DJD1 1756 aa14.47□□□□□ -0.09
LMO3-230ENST00000544276 QSER1Q2KHR3 1735 aa14.47□□□□□ -0.09
LMO3-230ENST00000544276 COL23A1Q86Y22 540 aaPredicted RBP14.47□□□□□ -0.09
LMO3-230ENST00000544276 ANKRD26Q9UPS8 1709 aa14.46□□□□□ -0.09
LMO3-230ENST00000544276 PIGBQ92521 554 aa14.46□□□□□ -0.09
LMO3-230ENST00000544276 PANK3Q9H999 370 aa14.46□□□□□ -0.09
LMO3-230ENST00000544276 EIF4A2Q14240 407 aaKnown RBP14.45□□□□□ -0.1
LMO3-230ENST00000544276 IFNL2Q8IZJ0 200 aa14.45□□□□□ -0.1
LMO3-230ENST00000544276 CCER1Q8TC90 406 aaPredicted RBP14.45□□□□□ -0.1
LMO3-230ENST00000544276 POLR3GLQ9BT43 218 aa14.45□□□□□ -0.1
LMO3-230ENST00000544276 COL24A1Q17RW2 1714 aa14.44□□□□□ -0.1
LMO3-230ENST00000544276 PHKG2P15735 406 aa14.44□□□□□ -0.1
LMO3-230ENST00000544276 PKD1L3Q7Z443 1732 aa14.44□□□□□ -0.1
LMO3-230ENST00000544276 IGSF1Q8N6C5 1336 aa14.43□□□□□ -0.1
LMO3-230ENST00000544276 LOC102724428A0A0B4J2F2 783 aa14.42□□□□□ -0.1
LMO3-230ENST00000544276 TNNT2P45379 298 aaPredicted RBP14.42□□□□□ -0.1
LMO3-230ENST00000544276 SIK1P57059 783 aa14.42□□□□□ -0.1
LMO3-230ENST00000544276 TMOD3Q9NYL9 352 aa14.42□□□□□ -0.1
LMO3-230ENST00000544276 GPR162Q16538 588 aa14.41□□□□□ -0.1
LMO3-230ENST00000544276 ZNF784Q8NCA9 323 aaPredicted RBP14.41□□□□□ -0.1
LMO3-230ENST00000544276 AK7Q96M32 723 aa14.41□□□□□ -0.1
LMO3-230ENST00000544276 KAT6BQ8WYB5 2073 aa14.4□□□□□ -0.1
LMO3-230ENST00000544276 ERVV-2B6SEH9 535 aa14.4□□□□□ -0.1
LMO3-230ENST00000544276 HSP90AB1P08238 724 aaKnown RBP14.4□□□□□ -0.1
LMO3-230ENST00000544276 SSFA2P28290 1259 aa14.4□□□□□ -0.1
LMO3-230ENST00000544276 AMOTQ4VCS5 1084 aa14.4□□□□□ -0.1
LMO3-230ENST00000544276 CD2APQ9Y5K6 639 aa14.4□□□□□ -0.1
LMO3-230ENST00000544276 PLEKHO1Q53GL0 409 aaPredicted RBP14.39□□□□□ -0.11
LMO3-230ENST00000544276 MORC1Q86VD1 984 aa14.39□□□□□ -0.11
LMO3-230ENST00000544276 NLGN2Q8NFZ4 835 aa14.39□□□□□ -0.11
LMO3-230ENST00000544276 DCAF5Q96JK2 942 aa14.39□□□□□ -0.11
LMO3-230ENST00000544276 ASAP1Q9ULH1 1129 aa14.39□□□□□ -0.11
LMO3-230ENST00000544276 KNSTRNQ9Y448 316 aa14.39□□□□□ -0.11
LMO3-230ENST00000544276 GOLGB1Q14789 3259 aaKnown RBP14.39□□□□□ -0.11
LMO3-230ENST00000544276 TOGARAM1Q9Y4F4 1720 aa14.38□□□□□ -0.11
LMO3-230ENST00000544276 GRIN3BO60391 1043 aa14.38□□□□□ -0.11
LMO3-230ENST00000544276 KLHL34Q8N239 644 aa14.38□□□□□ -0.11
LMO3-230ENST00000544276 ATG3Q9NT62 314 aa14.38□□□□□ -0.11
LMO3-230ENST00000544276 C5P01031 1676 aa14.37□□□□□ -0.11
LMO3-230ENST00000544276 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.37□□□□□ -0.11
LMO3-230ENST00000544276 AMIGO3Q86WK7 504 aa14.37□□□□□ -0.11
LMO3-230ENST00000544276 LINC00116Q8NCU8 138 aa14.37□□□□□ -0.11
LMO3-230ENST00000544276 TUBGCP6Q96RT7 1819 aa14.36□□□□□ -0.11
LMO3-230ENST00000544276 ATP6V1AP38606 617 aa14.36□□□□□ -0.11
LMO3-230ENST00000544276 ITPK1Q13572 414 aa14.36□□□□□ -0.11
LMO3-230ENST00000544276 AMER1Q5JTC6 1135 aaPredicted RBP14.36□□□□□ -0.11
LMO3-230ENST00000544276 MSL1Q68DK7 614 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms