RNA–Protein interactions for RNA: ENST00000544223.6

HCFC2-202, Transcript of host cell factor C2, humanhuman

TSL 2

Gene HCFC2, Length 2,538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-202ENST00000544223 ITPRIPQ8IWB1 547 aa17.56■□□□□ 0.4
HCFC2-202ENST00000544223 DZIP1LQ8IYY4 767 aaKnown RBP17.55■□□□□ 0.4
HCFC2-202ENST00000544223 IL17REQ8NFR9 667 aa17.55■□□□□ 0.4
HCFC2-202ENST00000544223 TMEM57Q8N5G2 664 aa17.55■□□□□ 0.4
HCFC2-202ENST00000544223 LGR6Q9HBX8 967 aa17.55■□□□□ 0.4
HCFC2-202ENST00000544223 KDM2BQ8NHM5 1336 aa17.55■□□□□ 0.4
HCFC2-202ENST00000544223 ATF7IPQ6VMQ6 1270 aa17.54■□□□□ 0.4
HCFC2-202ENST00000544223 USP19O94966 1318 aa17.54■□□□□ 0.4
HCFC2-202ENST00000544223 KIF1AQ12756 1690 aa17.54■□□□□ 0.4
HCFC2-202ENST00000544223 CALD1Q05682 793 aaKnown RBP17.54■□□□□ 0.4
HCFC2-202ENST00000544223 NPHP3Q7Z494 1330 aa17.54■□□□□ 0.4
HCFC2-202ENST00000544223 CRB1P82279 1406 aa17.53■□□□□ 0.4
HCFC2-202ENST00000544223 CHL1O00533 1208 aa17.53■□□□□ 0.4
HCFC2-202ENST00000544223 ALS2Q96Q42 1657 aa17.53■□□□□ 0.4
HCFC2-202ENST00000544223 TSPYL4Q9UJ04 414 aa17.53■□□□□ 0.4
HCFC2-202ENST00000544223 GNAT3A8MTJ3 354 aa17.52■□□□□ 0.4
HCFC2-202ENST00000544223 RGS3P49796 1198 aa17.52■□□□□ 0.4
HCFC2-202ENST00000544223 MRPL50Q8N5N7 158 aaKnown RBP17.52■□□□□ 0.4
HCFC2-202ENST00000544223 MVPQ14764 893 aaKnown RBP17.52■□□□□ 0.39
HCFC2-202ENST00000544223 MPRIPQ6WCQ1 1025 aa17.52■□□□□ 0.39
HCFC2-202ENST00000544223 RTL1A6NKG5 1358 aa17.52■□□□□ 0.39
HCFC2-202ENST00000544223 SLIT3O75094 1523 aa17.52■□□□□ 0.39
HCFC2-202ENST00000544223 GAS2L2Q8NHY3 880 aa17.51■□□□□ 0.39
HCFC2-202ENST00000544223 DCCP43146 1447 aa17.51■□□□□ 0.39
HCFC2-202ENST00000544223 NLRP2Q9NX02 1062 aa17.51■□□□□ 0.39
HCFC2-202ENST00000544223 PXDNQ92626 1479 aa17.5■□□□□ 0.39
HCFC2-202ENST00000544223 KIF24Q5T7B8 1368 aa17.5■□□□□ 0.39
HCFC2-202ENST00000544223 CT47B1P0C2W7 299 aaPredicted RBP17.5■□□□□ 0.39
HCFC2-202ENST00000544223 SPATA31A3Q5VYP0 1347 aa17.5■□□□□ 0.39
HCFC2-202ENST00000544223 C1orf115Q9H7X2 142 aa17.5■□□□□ 0.39
HCFC2-202ENST00000544223 KIAA0232Q92628 1395 aa17.49■□□□□ 0.39
HCFC2-202ENST00000544223 ERBB3P21860 1342 aa17.48■□□□□ 0.39
HCFC2-202ENST00000544223 CSB-PGBD3P0DP91 1061 aa17.48■□□□□ 0.39
HCFC2-202ENST00000544223 ZNF530Q6P9A1 599 aaPredicted RBP17.48■□□□□ 0.39
HCFC2-202ENST00000544223 TNS3Q68CZ2 1445 aa17.48■□□□□ 0.39
HCFC2-202ENST00000544223 MAP3K5Q99683 1374 aa17.48■□□□□ 0.39
HCFC2-202ENST00000544223 KCNQ3O43525 872 aa17.48■□□□□ 0.39
HCFC2-202ENST00000544223 ALDH1L2Q3SY69 923 aa17.47■□□□□ 0.39
HCFC2-202ENST00000544223 CENPQQ7L2Z9 268 aaPredicted RBP17.47■□□□□ 0.39
HCFC2-202ENST00000544223 NCOA3Q9Y6Q9 1424 aa17.46■□□□□ 0.39
HCFC2-202ENST00000544223 G2E3Q7L622 706 aa17.46■□□□□ 0.38
HCFC2-202ENST00000544223 KIF16BQ96L93 1317 aa17.45■□□□□ 0.38
HCFC2-202ENST00000544223 BCL11AQ9H165 835 aa17.45■□□□□ 0.38
HCFC2-202ENST00000544223 HAP1P54257 671 aaPredicted RBP17.45■□□□□ 0.38
HCFC2-202ENST00000544223 PHRF1Q9P1Y6 1649 aaKnown RBP17.44■□□□□ 0.38
HCFC2-202ENST00000544223 SLC4A2P04920 1241 aa17.44■□□□□ 0.38
HCFC2-202ENST00000544223 F6X3S4 739 aa17.43■□□□□ 0.38
HCFC2-202ENST00000544223 IPO8O15397 1037 aaKnown RBP17.43■□□□□ 0.38
HCFC2-202ENST00000544223 TAF7Q15545 349 aaPredicted RBP17.41■□□□□ 0.38
HCFC2-202ENST00000544223 PRDM11Q9NQV5 511 aa17.41■□□□□ 0.38
HCFC2-202ENST00000544223 USP35Q9P2H5 1018 aa17.41■□□□□ 0.38
HCFC2-202ENST00000544223 STRN4Q9NRL3 753 aa17.41■□□□□ 0.38
HCFC2-202ENST00000544223 PRAMEF22A3QJZ6 481 aa17.4■□□□□ 0.38
HCFC2-202ENST00000544223 EIF2S2P20042 333 aaKnown RBP17.4■□□□□ 0.38
HCFC2-202ENST00000544223 PLEKHO1Q53GL0 409 aaPredicted RBP17.4■□□□□ 0.38
HCFC2-202ENST00000544223 SOS2Q07890 1332 aaPredicted RBP17.4■□□□□ 0.38
HCFC2-202ENST00000544223 ANXA1P04083 346 aa17.4■□□□□ 0.38
HCFC2-202ENST00000544223 ZBTB40Q9NUA8 1239 aa17.4■□□□□ 0.38
HCFC2-202ENST00000544223 DDX19BQ9UMR2 479 aa17.4■□□□□ 0.38
HCFC2-202ENST00000544223 COL18A1P39060 1754 aa17.39■□□□□ 0.37
HCFC2-202ENST00000544223 C1orf141Q5JVX7 400 aa17.39■□□□□ 0.37
HCFC2-202ENST00000544223 SLC4A10Q6U841 1118 aa17.39■□□□□ 0.37
HCFC2-202ENST00000544223 NPM2Q86SE8 214 aaKnown RBP17.39■□□□□ 0.37
HCFC2-202ENST00000544223 MEGF6O75095 1541 aa17.38■□□□□ 0.37
HCFC2-202ENST00000544223 PDE4AP27815 886 aa17.38■□□□□ 0.37
HCFC2-202ENST00000544223 CRYBG1Q9Y4K1 1723 aa17.38■□□□□ 0.37
HCFC2-202ENST00000544223 AKAP4Q5JQC9 854 aa17.38■□□□□ 0.37
HCFC2-202ENST00000544223 RAPGEF4Q8WZA2 1011 aa17.38■□□□□ 0.37
HCFC2-202ENST00000544223 ZNF428Q96B54 188 aa17.38■□□□□ 0.37
HCFC2-202ENST00000544223 ZBTB7BO15156 539 aaPredicted RBP17.37■□□□□ 0.37
HCFC2-202ENST00000544223 TEFQ10587 303 aa17.37■□□□□ 0.37
HCFC2-202ENST00000544223 LRRC37A3O60309 1634 aa17.37■□□□□ 0.37
HCFC2-202ENST00000544223 BTBD11A6QL63 1104 aa17.37■□□□□ 0.37
HCFC2-202ENST00000544223 RNMTO43148 476 aaKnown RBP17.37■□□□□ 0.37
HCFC2-202ENST00000544223 HTATSF1O43719 755 aaKnown RBP17.37■□□□□ 0.37
HCFC2-202ENST00000544223 SLC39A6Q13433 755 aa17.37■□□□□ 0.37
HCFC2-202ENST00000544223 CEMIPQ8WUJ3 1361 aa17.36■□□□□ 0.37
HCFC2-202ENST00000544223 BRPF1P55201 1214 aaPredicted RBP17.36■□□□□ 0.37
HCFC2-202ENST00000544223 VIRMAQ69YN4 1812 aaKnown RBP17.36■□□□□ 0.37
HCFC2-202ENST00000544223 ABCC4O15439 1325 aa17.36■□□□□ 0.37
HCFC2-202ENST00000544223 PHAXQ9H814 394 aaKnown RBP17.36■□□□□ 0.37
HCFC2-202ENST00000544223 PDZRN3Q9UPQ7 1066 aa17.36■□□□□ 0.37
HCFC2-202ENST00000544223 RGS12O14924 1447 aa17.35■□□□□ 0.37
HCFC2-202ENST00000544223 CAMTA1Q9Y6Y1 1673 aa17.35■□□□□ 0.37
HCFC2-202ENST00000544223 MS4A1P11836 297 aa17.35■□□□□ 0.37
HCFC2-202ENST00000544223 TOM1L2Q6ZVM7 507 aa17.35■□□□□ 0.37
HCFC2-202ENST00000544223 PIP4K2BP78356 416 aa17.34■□□□□ 0.37
HCFC2-202ENST00000544223 AMOTQ4VCS5 1084 aa17.34■□□□□ 0.37
HCFC2-202ENST00000544223 LARP1Q6PKG0 1096 aaKnown RBP17.34■□□□□ 0.37
HCFC2-202ENST00000544223 RWDD1Q9H446 243 aaPredicted RBP17.34■□□□□ 0.37
HCFC2-202ENST00000544223 EIF4A1P60842 406 aaKnown RBP17.33■□□□□ 0.36
HCFC2-202ENST00000544223 ARHGAP45Q92619 1136 aa17.33■□□□□ 0.36
HCFC2-202ENST00000544223 CYP27B1O15528 508 aa17.32■□□□□ 0.36
HCFC2-202ENST00000544223 TATP17735 454 aaPredicted RBP17.32■□□□□ 0.36
HCFC2-202ENST00000544223 SIRT2Q8IXJ6 389 aa17.32■□□□□ 0.36
HCFC2-202ENST00000544223 NFATC2IPQ8NCF5 419 aa17.32■□□□□ 0.36
HCFC2-202ENST00000544223 FAM208AQ9UK61 1670 aaKnown RBP17.32■□□□□ 0.36
HCFC2-202ENST00000544223 NCAPD2Q15021 1401 aa17.32■□□□□ 0.36
HCFC2-202ENST00000544223 HDGFL1Q5TGJ6 251 aa17.32■□□□□ 0.36
HCFC2-202ENST00000544223 BACH2Q9BYV9 841 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms