RNA–Protein interactions for RNA: ENST00000544154.1

NPIPB3-213, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 5

Gene NPIPB3, Length 526 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-213ENST00000544154 KDF1Q8NAX2 398 aaPredicted RBP4.44□□□□□ -1.7
NPIPB3-213ENST00000544154 PGPEP1Q9NXJ5 209 aa4.44□□□□□ -1.7
NPIPB3-213ENST00000544154 H7C1W4 665 aa4.43□□□□□ -1.7
NPIPB3-213ENST00000544154 C2CD2LO14523 706 aa4.43□□□□□ -1.7
NPIPB3-213ENST00000544154 EPXP11678 715 aa4.43□□□□□ -1.7
NPIPB3-213ENST00000544154 PRICKLE2Q7Z3G6 844 aa4.43□□□□□ -1.7
NPIPB3-213ENST00000544154 TRMT44Q8IYL2 757 aaKnown RBP4.43□□□□□ -1.7
NPIPB3-213ENST00000544154 ARHGEF1Q92888 912 aaKnown RBP4.43□□□□□ -1.7
NPIPB3-213ENST00000544154 PLVAPQ9BX97 442 aa4.43□□□□□ -1.7
NPIPB3-213ENST00000544154 CFHR5Q9BXR6 569 aa4.43□□□□□ -1.7
NPIPB3-213ENST00000544154 GGA1Q9UJY5 639 aa4.43□□□□□ -1.7
NPIPB3-213ENST00000544154 FBLN7Q53RD9 439 aa4.42□□□□□ -1.7
NPIPB3-213ENST00000544154 BPHLQ86WA6 291 aaPredicted RBP4.42□□□□□ -1.7
NPIPB3-213ENST00000544154 DYRK1BQ9Y463 629 aa4.42□□□□□ -1.7
NPIPB3-213ENST00000544154 AGERQ15109 404 aa4.41□□□□□ -1.7
NPIPB3-213ENST00000544154 OAS3Q9Y6K5 1087 aaKnown RBP4.41□□□□□ -1.7
NPIPB3-213ENST00000544154 C6orf229H3BNL8 230 aa4.39□□□□□ -1.71
NPIPB3-213ENST00000544154 F12P00748 615 aaPredicted RBP4.39□□□□□ -1.71
NPIPB3-213ENST00000544154 CTHP32929 405 aa4.39□□□□□ -1.71
NPIPB3-213ENST00000544154 DESI1Q6ICB0 168 aa4.39□□□□□ -1.71
NPIPB3-213ENST00000544154 MAP10Q9P2G4 905 aa4.39□□□□□ -1.71
NPIPB3-213ENST00000544154 RNF144AP50876 292 aaPredicted RBP4.38□□□□□ -1.71
NPIPB3-213ENST00000544154 KRTAP1-1Q07627 177 aa4.38□□□□□ -1.71
NPIPB3-213ENST00000544154 CHSY3Q70JA7 882 aa4.38□□□□□ -1.71
NPIPB3-213ENST00000544154 PRR7Q8TB68 274 aa4.38□□□□□ -1.71
NPIPB3-213ENST00000544154 GAS2L1Q99501 681 aaPredicted RBP4.38□□□□□ -1.71
NPIPB3-213ENST00000544154 NUCKS1Q9H1E3 243 aaKnown RBP4.38□□□□□ -1.71
NPIPB3-213ENST00000544154 PCMTD2Q9NV79 361 aa4.38□□□□□ -1.71
NPIPB3-213ENST00000544154 GNPATO15228 680 aa4.37□□□□□ -1.71
NPIPB3-213ENST00000544154 C8AP07357 584 aa4.37□□□□□ -1.71
NPIPB3-213ENST00000544154 UBAP2LQ14157 1087 aaKnown RBP4.37□□□□□ -1.71
NPIPB3-213ENST00000544154 LYPD8Q6UX82 237 aa4.37□□□□□ -1.71
NPIPB3-213ENST00000544154 SPOCD1Q6ZMY3 1216 aa4.37□□□□□ -1.71
NPIPB3-213ENST00000544154 RNF135Q8IUD6 432 aa4.37□□□□□ -1.71
NPIPB3-213ENST00000544154 PTGIRP43119 386 aa4.36□□□□□ -1.71
NPIPB3-213ENST00000544154 KCNV2Q8TDN2 545 aa4.36□□□□□ -1.71
NPIPB3-213ENST00000544154 TSHZ2Q9NRE2 1034 aa4.36□□□□□ -1.71
NPIPB3-213ENST00000544154 GPR37O15354 613 aa4.35□□□□□ -1.71
NPIPB3-213ENST00000544154 FDX1P10109 184 aa4.35□□□□□ -1.71
NPIPB3-213ENST00000544154 ADD1P35611 737 aaKnown RBP4.35□□□□□ -1.71
NPIPB3-213ENST00000544154 AMER1Q5JTC6 1135 aaPredicted RBP4.35□□□□□ -1.71
NPIPB3-213ENST00000544154 OGFOD2Q6N063 350 aa4.35□□□□□ -1.71
NPIPB3-213ENST00000544154 APBA3O96018 575 aa4.34□□□□□ -1.71
NPIPB3-213ENST00000544154 ADH1AP07327 375 aa4.34□□□□□ -1.71
NPIPB3-213ENST00000544154 SH3BP5LQ7L8J4 393 aa4.34□□□□□ -1.71
NPIPB3-213ENST00000544154 CTBSQ01459 385 aa4.33□□□□□ -1.72
NPIPB3-213ENST00000544154 NEURL1BA8MQ27 555 aa4.32□□□□□ -1.72
NPIPB3-213ENST00000544154 FAM229AH3BQW9 127 aa4.32□□□□□ -1.72
NPIPB3-213ENST00000544154 SEMA3EO15041 775 aa4.32□□□□□ -1.72
NPIPB3-213ENST00000544154 SSTR4P31391 388 aa4.32□□□□□ -1.72
NPIPB3-213ENST00000544154 GP2P55259 537 aaKnown RBP4.32□□□□□ -1.72
NPIPB3-213ENST00000544154 POU4F2Q12837 409 aa4.32□□□□□ -1.72
NPIPB3-213ENST00000544154 KLF15Q9UIH9 416 aa4.32□□□□□ -1.72
NPIPB3-213ENST00000544154 BMP4P12644 408 aa4.31□□□□□ -1.72
NPIPB3-213ENST00000544154 CD97P48960 835 aa4.31□□□□□ -1.72
NPIPB3-213ENST00000544154 ADGRE1Q14246 886 aa4.31□□□□□ -1.72
NPIPB3-213ENST00000544154 P3H3Q8IVL6 736 aa4.31□□□□□ -1.72
NPIPB3-213ENST00000544154 SSBP4Q9BWG4 385 aaPredicted RBP4.31□□□□□ -1.72
NPIPB3-213ENST00000544154 LILRA1O75019 489 aa4.3□□□□□ -1.72
NPIPB3-213ENST00000544154 ARAFP10398 606 aa4.3□□□□□ -1.72
NPIPB3-213ENST00000544154 COL9A3Q14050 684 aaPredicted RBP4.3□□□□□ -1.72
NPIPB3-213ENST00000544154 GRIK4Q16099 956 aa4.3□□□□□ -1.72
NPIPB3-213ENST00000544154 ERFEQ4G0M1 354 aa4.3□□□□□ -1.72
NPIPB3-213ENST00000544154 PRRT3Q5FWE3 981 aa4.3□□□□□ -1.72
NPIPB3-213ENST00000544154 SMYD5Q6GMV2 418 aa4.3□□□□□ -1.72
NPIPB3-213ENST00000544154 KCTD15Q96SI1 283 aaPredicted RBP4.3□□□□□ -1.72
NPIPB3-213ENST00000544154 RTN4Q9NQC3 1192 aaKnown RBP4.3□□□□□ -1.72
NPIPB3-213ENST00000544154 TMPRSS4Q9NRS4 437 aa4.3□□□□□ -1.72
NPIPB3-213ENST00000544154 PHF24Q9UPV7 400 aa4.3□□□□□ -1.72
NPIPB3-213ENST00000544154 ADAMTS4O75173 837 aa4.29□□□□□ -1.72
NPIPB3-213ENST00000544154 MED26O95402 600 aa4.29□□□□□ -1.72
NPIPB3-213ENST00000544154 F11P03951 625 aa4.29□□□□□ -1.72
NPIPB3-213ENST00000544154 DHX9Q08211 1270 aaKnown RBP4.29□□□□□ -1.72
NPIPB3-213ENST00000544154 MBTPS1Q14703 1052 aa4.29□□□□□ -1.72
NPIPB3-213ENST00000544154 INTS6LQ5JSJ4 861 aaKnown RBP4.29□□□□□ -1.72
NPIPB3-213ENST00000544154 RBM26Q5T8P6 1007 aaKnown RBP4.29□□□□□ -1.72
NPIPB3-213ENST00000544154 POU5F2Q8N7G0 328 aa4.29□□□□□ -1.72
NPIPB3-213ENST00000544154 MAGEB6P1A0A0J9YX57 407 aa4.28□□□□□ -1.72
NPIPB3-213ENST00000544154 FCHSD1Q86WN1 690 aa4.28□□□□□ -1.72
NPIPB3-213ENST00000544154 TP53INP1Q96A56 240 aa4.28□□□□□ -1.72
NPIPB3-213ENST00000544154 NACC1Q96RE7 527 aa4.28□□□□□ -1.72
NPIPB3-213ENST00000544154 NDFIP2Q9NV92 336 aa4.28□□□□□ -1.72
NPIPB3-213ENST00000544154 TESPA1A2RU30 521 aaPredicted RBP4.27□□□□□ -1.73
NPIPB3-213ENST00000544154 NBPF14Q5TI25 921 aa4.27□□□□□ -1.73
NPIPB3-213ENST00000544154 NBPF10Q6P3W6 841 aaKnown RBP4.27□□□□□ -1.73
NPIPB3-213ENST00000544154 NBPF15Q8N660 670 aa4.27□□□□□ -1.73
NPIPB3-213ENST00000544154 ZNF784Q8NCA9 323 aaPredicted RBP4.27□□□□□ -1.73
NPIPB3-213ENST00000544154 NCANO14594 1321 aa4.26□□□□□ -1.73
NPIPB3-213ENST00000544154 ZNF865P0CJ78 1059 aaPredicted RBP4.26□□□□□ -1.73
NPIPB3-213ENST00000544154 GPC1P35052 558 aa4.26□□□□□ -1.73
NPIPB3-213ENST00000544154 ATXN7L1Q9ULK2 861 aaPredicted RBP4.26□□□□□ -1.73
NPIPB3-213ENST00000544154 JAG2Q9Y219 1238 aa4.26□□□□□ -1.73
NPIPB3-213ENST00000544154 SPDYE3A6NKU9 549 aa4.25□□□□□ -1.73
NPIPB3-213ENST00000544154 SELPP16109 830 aa4.25□□□□□ -1.73
NPIPB3-213ENST00000544154 NDUFV2P19404 249 aa4.25□□□□□ -1.73
NPIPB3-213ENST00000544154 FGFR3P22607 806 aa4.25□□□□□ -1.73
NPIPB3-213ENST00000544154 MTMR2Q13614 643 aa4.25□□□□□ -1.73
NPIPB3-213ENST00000544154 TXNRD3Q86VQ6 643 aa4.25□□□□□ -1.73
NPIPB3-213ENST00000544154 ABHD17AQ96GS6 310 aa4.25□□□□□ -1.73
NPIPB3-213ENST00000544154 SPDYE5A6NIY4 337 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms