RNA–Protein interactions for RNA: ENST00000544079.2

CCT4-204, Transcript of chaperonin containing TCP1 subunit 4, humanhuman

TSL 2 BASIC

Gene CCT4, Length 2,261 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT4-204ENST00000544079 VAMP4O75379 141 aa22.11■■□□□ 1.13
CCT4-204ENST00000544079 CCDC183Q5T5S1 534 aa22.11■■□□□ 1.13
CCT4-204ENST00000544079 API5Q9BZZ5 524 aaKnown RBP22.11■■□□□ 1.13
CCT4-204ENST00000544079 TTC12Q9H892 705 aaPredicted RBP22.11■■□□□ 1.13
CCT4-204ENST00000544079 ERC2O15083 957 aa22.11■■□□□ 1.13
CCT4-204ENST00000544079 USP25Q9UHP3 1055 aa22.11■■□□□ 1.13
CCT4-204ENST00000544079 TMEM51Q9NW97 253 aa22.1■■□□□ 1.13
CCT4-204ENST00000544079 SDSP20132 328 aa22.1■■□□□ 1.13
CCT4-204ENST00000544079 ZNF830Q96NB3 372 aaPredicted RBP22.1■■□□□ 1.13
CCT4-204ENST00000544079 C14orf93Q9H972 538 aaKnown RBP22.1■■□□□ 1.13
CCT4-204ENST00000544079 SPAG9O60271 1321 aaKnown RBP22.09■■□□□ 1.13
CCT4-204ENST00000544079 ASXL2Q76L83 1435 aa22.09■■□□□ 1.13
CCT4-204ENST00000544079 KDM4AO75164 1064 aa22.09■■□□□ 1.13
CCT4-204ENST00000544079 EVC2Q86UK5 1308 aa22.09■■□□□ 1.13
CCT4-204ENST00000544079 RIOK3O14730 519 aaKnown RBP22.09■■□□□ 1.13
CCT4-204ENST00000544079 PNPLA6Q8IY17 1366 aa22.09■■□□□ 1.13
CCT4-204ENST00000544079 UGGT1Q9NYU2 1555 aa22.09■■□□□ 1.13
CCT4-204ENST00000544079 EFCAB6Q5THR3 1501 aa22.08■■□□□ 1.12
CCT4-204ENST00000544079 PPLO60437 1756 aa22.08■■□□□ 1.12
CCT4-204ENST00000544079 ATAD2Q6PL18 1390 aa22.08■■□□□ 1.12
CCT4-204ENST00000544079 SPDYE4A6NLX3 237 aa22.08■■□□□ 1.12
CCT4-204ENST00000544079 IL17RAQ96F46 866 aa22.08■■□□□ 1.12
CCT4-204ENST00000544079 CHAMP1Q96JM3 812 aa22.08■■□□□ 1.12
CCT4-204ENST00000544079 ARAP3Q8WWN8 1544 aa22.07■■□□□ 1.12
CCT4-204ENST00000544079 TULP4Q9NRJ4 1543 aa22.07■■□□□ 1.12
CCT4-204ENST00000544079 U2AF2P26368 475 aaKnown RBP eCLIP22.07■■□□□ 1.122e-22■■■■■ 36.9
CCT4-204ENST00000544079 FCHSD2O94868 740 aa22.06■■□□□ 1.12
CCT4-204ENST00000544079 RTL1A6NKG5 1358 aa22.06■■□□□ 1.12
CCT4-204ENST00000544079 MX1P20591 662 aa22.06■■□□□ 1.12
CCT4-204ENST00000544079 ANAPC15P60006 121 aa22.06■■□□□ 1.12
CCT4-204ENST00000544079 TRAK1Q9UPV9 953 aa22.06■■□□□ 1.12
CCT4-204ENST00000544079 WDR33Q9C0J8 1336 aaKnown RBP22.06■■□□□ 1.12
CCT4-204ENST00000544079 ANKRD44Q8N8A2 993 aa22.05■■□□□ 1.12
CCT4-204ENST00000544079 MROH1Q8NDA8 1641 aa22.05■■□□□ 1.12
CCT4-204ENST00000544079 GOLGA6L6A8MZA4 724 aa22.05■■□□□ 1.12
CCT4-204ENST00000544079 RPAP2Q8IXW5 612 aaPredicted RBP22.05■■□□□ 1.12
CCT4-204ENST00000544079 ABCA9Q8IUA7 1624 aa22.04■■□□□ 1.12
CCT4-204ENST00000544079 FAM135BQ49AJ0 1406 aa22.04■■□□□ 1.12
CCT4-204ENST00000544079 ZNF771Q7L3S4 317 aaPredicted RBP22.04■■□□□ 1.12
CCT4-204ENST00000544079 LRRC7Q96NW7 1537 aa22.04■■□□□ 1.12
CCT4-204ENST00000544079 DIAPH1O60610 1272 aaKnown RBP22.04■■□□□ 1.12
CCT4-204ENST00000544079 NEK4P51957 841 aa22.04■■□□□ 1.12
CCT4-204ENST00000544079 USP48Q86UV5 1035 aa22.04■■□□□ 1.12
CCT4-204ENST00000544079 C17orf53Q8N3J3 647 aaPredicted RBP22.04■■□□□ 1.12
CCT4-204ENST00000544079 FAM193AP78312 1265 aa22.03■■□□□ 1.12
CCT4-204ENST00000544079 IFT57Q9NWB7 429 aa22.03■■□□□ 1.12
CCT4-204ENST00000544079 ZFYVE9O95405 1425 aa22.03■■□□□ 1.12
CCT4-204ENST00000544079 ATP10DQ9P241 1426 aa22.03■■□□□ 1.12
CCT4-204ENST00000544079 GNAI1P63096 354 aa22.03■■□□□ 1.12
CCT4-204ENST00000544079 OSBPL3Q9H4L5 887 aa22.03■■□□□ 1.12
CCT4-204ENST00000544079 ARHGEF28Q8N1W1 1705 aaKnown RBP22.02■■□□□ 1.12
CCT4-204ENST00000544079 FAM177BA6PVY3 158 aa22.02■■□□□ 1.12
CCT4-204ENST00000544079 GADD45BO75293 160 aaPredicted RBP22.02■■□□□ 1.12
CCT4-204ENST00000544079 CGNQ9P2M7 1197 aaKnown RBP22.02■■□□□ 1.12
CCT4-204ENST00000544079 LMTK2Q8IWU2 1503 aa22.02■■□□□ 1.12
CCT4-204ENST00000544079 MCCP23508 829 aa22.01■■□□□ 1.11
CCT4-204ENST00000544079 FOXD4L5Q5VV16 416 aaPredicted RBP22.01■■□□□ 1.11
CCT4-204ENST00000544079 FOXD4L4Q8WXT5 416 aaPredicted RBP22.01■■□□□ 1.11
CCT4-204ENST00000544079 CTNNA3Q9UI47 895 aa22.01■■□□□ 1.11
CCT4-204ENST00000544079 RGS12O14924 1447 aa22.01■■□□□ 1.11
CCT4-204ENST00000544079 RPAP1Q9BWH6 1393 aaPredicted RBP22■■□□□ 1.11
CCT4-204ENST00000544079 CCDC66A2RUB6 948 aa22■■□□□ 1.11
CCT4-204ENST00000544079 C16orf71Q8IYS4 520 aaPredicted RBP22■■□□□ 1.11
CCT4-204ENST00000544079 IPO4Q8TEX9 1081 aaKnown RBP22■■□□□ 1.11
CCT4-204ENST00000544079 DDX41Q9UJV9 622 aaKnown RBP22■■□□□ 1.11
CCT4-204ENST00000544079 SSH2Q76I76 1423 aa22■■□□□ 1.11
CCT4-204ENST00000544079 ZNF853P0CG23 659 aa22■■□□□ 1.11
CCT4-204ENST00000544079 NCBP1Q09161 790 aaKnown RBP22■■□□□ 1.11
CCT4-204ENST00000544079 FUCA2Q9BTY2 467 aa22■■□□□ 1.11
CCT4-204ENST00000544079 KCNF1Q9H3M0 494 aa22■■□□□ 1.11
CCT4-204ENST00000544079 MORC2Q9Y6X9 1032 aaPredicted RBP22■■□□□ 1.11
CCT4-204ENST00000544079 GLI2P10070 1586 aa21.99■■□□□ 1.11
CCT4-204ENST00000544079 HCLS1P14317 486 aaPredicted RBP21.99■■□□□ 1.11
CCT4-204ENST00000544079 UBE2HP62256 183 aa21.99■■□□□ 1.11
CCT4-204ENST00000544079 ZBTB7CA1YPR0 619 aa21.99■■□□□ 1.11
CCT4-204ENST00000544079 SMTNL1A8MU46 457 aa21.99■■□□□ 1.11
CCT4-204ENST00000544079 SLC20A2Q08357 652 aa21.99■■□□□ 1.11
CCT4-204ENST00000544079 PYCARDQ9ULZ3 195 aa21.99■■□□□ 1.11
CCT4-204ENST00000544079 ATP7AQ04656 1500 aa21.99■■□□□ 1.11
CCT4-204ENST00000544079 EPB41L2O43491 1005 aaKnown RBP21.98■■□□□ 1.11
CCT4-204ENST00000544079 NAP1L2Q9ULW6 460 aaPredicted RBP21.98■■□□□ 1.11
CCT4-204ENST00000544079 A0A1W2PP64 1363 aa21.98■■□□□ 1.11
CCT4-204ENST00000544079 RPGRIP1LQ68CZ1 1315 aa21.98■■□□□ 1.11
CCT4-204ENST00000544079 SLFN14P0C7P3 912 aa21.97■■□□□ 1.11
CCT4-204ENST00000544079 CREBRFQ8IUR6 639 aa21.97■■□□□ 1.11
CCT4-204ENST00000544079 NFE2L2Q16236 605 aa21.97■■□□□ 1.11
CCT4-204ENST00000544079 MPNDQ8N594 471 aa21.96■■□□□ 1.11
CCT4-204ENST00000544079 DIP2BQ9P265 1576 aa21.96■■□□□ 1.11
CCT4-204ENST00000544079 OTUD7AQ8TE49 926 aaPredicted RBP21.96■■□□□ 1.11
CCT4-204ENST00000544079 FRMPD1Q5SYB0 1578 aa21.95■■□□□ 1.11
CCT4-204ENST00000544079 ZCCHC11Q5TAX3 1644 aaKnown RBP21.95■■□□□ 1.1
CCT4-204ENST00000544079 TWISTNBQ3B726 338 aaPredicted RBP21.95■■□□□ 1.1
CCT4-204ENST00000544079 TSPYL6Q8N831 410 aa21.95■■□□□ 1.1
CCT4-204ENST00000544079 PAXBP1Q9Y5B6 917 aa21.95■■□□□ 1.1
CCT4-204ENST00000544079 ARHGEF40Q8TER5 1519 aa21.94■■□□□ 1.1
CCT4-204ENST00000544079 CEP85Q6P2H3 762 aa21.94■■□□□ 1.1
CCT4-204ENST00000544079 TUBGCP6Q96RT7 1819 aa21.94■■□□□ 1.1
CCT4-204ENST00000544079 SMARCA5O60264 1052 aaPredicted RBP21.93■■□□□ 1.1
CCT4-204ENST00000544079 ESYT1Q9BSJ8 1104 aa21.92■■□□□ 1.1
CCT4-204ENST00000544079 NPM1P06748 294 aaKnown RBP eCLIP21.92■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms