RNA–Protein interactions for RNA: ENST00000544004.1

AP000439.1-201, humanhuman

TSL 4 BASIC

Gene AP000439.1, Length 581 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000439.1-201ENST00000544004 NME9Q86XW9 330 aa16.25■□□□□ 0.19
AP000439.1-201ENST00000544004 CCNL1Q9UK58 526 aaPredicted RBP16.25■□□□□ 0.19
AP000439.1-201ENST00000544004 CD2APQ9Y5K6 639 aa16.24■□□□□ 0.19
AP000439.1-201ENST00000544004 NSD2O96028 1365 aa16.24■□□□□ 0.19
AP000439.1-201ENST00000544004 FAM208AQ9UK61 1670 aaKnown RBP16.22■□□□□ 0.19
AP000439.1-201ENST00000544004 LTV1Q96GA3 475 aaPredicted RBP16.21■□□□□ 0.19
AP000439.1-201ENST00000544004 KIF3CO14782 793 aa16.2■□□□□ 0.18
AP000439.1-201ENST00000544004 USP47Q96K76 1375 aa16.2■□□□□ 0.18
AP000439.1-201ENST00000544004 SBNO2Q9Y2G9 1366 aa16.2■□□□□ 0.18
AP000439.1-201ENST00000544004 C5P01031 1676 aa16.2■□□□□ 0.18
AP000439.1-201ENST00000544004 CD163L1Q9NR16 1453 aa16.18■□□□□ 0.18
AP000439.1-201ENST00000544004 ZCRB1Q8TBF4 217 aaKnown RBP16.18■□□□□ 0.18
AP000439.1-201ENST00000544004 IP6K1Q92551 441 aa16.18■□□□□ 0.18
AP000439.1-201ENST00000544004 WWC3Q9ULE0 1092 aa16.18■□□□□ 0.18
AP000439.1-201ENST00000544004 RGPD2P0DJD1 1756 aa16.18■□□□□ 0.18
AP000439.1-201ENST00000544004 APLP1P51693 650 aa16.17■□□□□ 0.18
AP000439.1-201ENST00000544004 TAF1LQ8IZX4 1826 aa16.17■□□□□ 0.18
AP000439.1-201ENST00000544004 IGSF1Q8N6C5 1336 aa16.17■□□□□ 0.18
AP000439.1-201ENST00000544004 FLAD1Q8NFF5 587 aa16.16■□□□□ 0.18
AP000439.1-201ENST00000544004 ROCK2O75116 1388 aaKnown RBP16.15■□□□□ 0.18
AP000439.1-201ENST00000544004 DNAJC5GQ8N7S2 189 aa16.15■□□□□ 0.18
AP000439.1-201ENST00000544004 TMC1Q8TDI8 760 aa16.15■□□□□ 0.18
AP000439.1-201ENST00000544004 L3MBTL2Q969R5 705 aa16.15■□□□□ 0.18
AP000439.1-201ENST00000544004 HDGFL2Q7Z4V5 671 aaPredicted RBP16.14■□□□□ 0.17
AP000439.1-201ENST00000544004 MEGF6O75095 1541 aa16.14■□□□□ 0.17
AP000439.1-201ENST00000544004 EDC4Q6P2E9 1401 aaKnown RBP16.13■□□□□ 0.17
AP000439.1-201ENST00000544004 SLC12A5Q9H2X9 1139 aa16.12■□□□□ 0.17
AP000439.1-201ENST00000544004 C4BP0C0L5 1744 aa16.11■□□□□ 0.17
AP000439.1-201ENST00000544004 TOMM70O94826 608 aa16.11■□□□□ 0.17
AP000439.1-201ENST00000544004 HMGB2P26583 209 aaKnown RBP16.11■□□□□ 0.17
AP000439.1-201ENST00000544004 TOGARAM1Q9Y4F4 1720 aa16.11■□□□□ 0.17
AP000439.1-201ENST00000544004 HOXC9P31274 260 aa16.1■□□□□ 0.17
AP000439.1-201ENST00000544004 PALLDQ8WX93 1383 aa16.1■□□□□ 0.17
AP000439.1-201ENST00000544004 UBR3Q6ZT12 1888 aa16.1■□□□□ 0.17
AP000439.1-201ENST00000544004 WDR90Q96KV7 1748 aa16.09■□□□□ 0.17
AP000439.1-201ENST00000544004 AMPHP49418 695 aa16.09■□□□□ 0.17
AP000439.1-201ENST00000544004 AMIGO3Q86WK7 504 aa16.09■□□□□ 0.17
AP000439.1-201ENST00000544004 MAP3K19Q56UN5 1328 aa16.09■□□□□ 0.17
AP000439.1-201ENST00000544004 A0A1W2PP64 1363 aa16.09■□□□□ 0.17
AP000439.1-201ENST00000544004 CICQ96RK0 1608 aaPredicted RBP16.08■□□□□ 0.17
AP000439.1-201ENST00000544004 PHF14O94880 888 aa16.08■□□□□ 0.16
AP000439.1-201ENST00000544004 FBLN1P23142 703 aa16.08■□□□□ 0.16
AP000439.1-201ENST00000544004 SMIM5Q71RC9 77 aa16.08■□□□□ 0.16
AP000439.1-201ENST00000544004 AK7Q96M32 723 aa16.08■□□□□ 0.16
AP000439.1-201ENST00000544004 TERF2IPQ9NYB0 399 aa16.08■□□□□ 0.16
AP000439.1-201ENST00000544004 CAPN15O75808 1086 aa16.07■□□□□ 0.16
AP000439.1-201ENST00000544004 COL13A1Q5TAT6 717 aaPredicted RBP16.07■□□□□ 0.16
AP000439.1-201ENST00000544004 NBPF6Q5VWK0 638 aa16.07■□□□□ 0.16
AP000439.1-201ENST00000544004 MPRIPQ6WCQ1 1025 aa16.07■□□□□ 0.16
AP000439.1-201ENST00000544004 NBPF4Q96M43 638 aa16.07■□□□□ 0.16
AP000439.1-201ENST00000544004 CGNL1Q0VF96 1302 aa16.06■□□□□ 0.16
AP000439.1-201ENST00000544004 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.06■□□□□ 0.16
AP000439.1-201ENST00000544004 USHBP1Q8N6Y0 703 aa16.06■□□□□ 0.16
AP000439.1-201ENST00000544004 ITGB4P16144 1822 aa16.05■□□□□ 0.16
AP000439.1-201ENST00000544004 RAPGEF4Q8WZA2 1011 aa16.05■□□□□ 0.16
AP000439.1-201ENST00000544004 COG3Q96JB2 828 aa16.05■□□□□ 0.16
AP000439.1-201ENST00000544004 NMRK2Q9NPI5 230 aa16.04■□□□□ 0.16
AP000439.1-201ENST00000544004 N4BP2Q86UW6 1770 aaPredicted RBP16.04■□□□□ 0.16
AP000439.1-201ENST00000544004 NSD3Q9BZ95 1437 aa16.03■□□□□ 0.16
AP000439.1-201ENST00000544004 PCDH11XQ9BZA7 1347 aa16.03■□□□□ 0.16
AP000439.1-201ENST00000544004 PCDH11YQ9BZA8 1340 aa16.03■□□□□ 0.16
AP000439.1-201ENST00000544004 TATP17735 454 aaPredicted RBP16.03■□□□□ 0.16
AP000439.1-201ENST00000544004 HTRA3P83110 453 aa16.03■□□□□ 0.16
AP000439.1-201ENST00000544004 SMARCC1Q92922 1105 aaPredicted RBP16.03■□□□□ 0.16
AP000439.1-201ENST00000544004 KLRG1Q96E93 195 aa16.03■□□□□ 0.16
AP000439.1-201ENST00000544004 SIN3AQ96ST3 1273 aa16.03■□□□□ 0.16
AP000439.1-201ENST00000544004 KIAA1551Q9HCM1 1747 aa16.02■□□□□ 0.16
AP000439.1-201ENST00000544004 SSFA2P28290 1259 aa16.02■□□□□ 0.16
AP000439.1-201ENST00000544004 BCS1LQ9Y276 419 aa16.02■□□□□ 0.16
AP000439.1-201ENST00000544004 KIF13BQ9NQT8 1826 aa16.02■□□□□ 0.16
AP000439.1-201ENST00000544004 JMYQ8N9B5 988 aa16.01■□□□□ 0.15
AP000439.1-201ENST00000544004 PXDNLA1KZ92 1463 aa16.01■□□□□ 0.15
AP000439.1-201ENST00000544004 MAP2P11137 1827 aaKnown RBP16.01■□□□□ 0.15
AP000439.1-201ENST00000544004 RTL1A6NKG5 1358 aa16■□□□□ 0.15
AP000439.1-201ENST00000544004 RRS1Q15050 365 aaKnown RBP16■□□□□ 0.15
AP000439.1-201ENST00000544004 ARHGAP27Q6ZUM4 889 aa16■□□□□ 0.15
AP000439.1-201ENST00000544004 TNS4Q8IZW8 715 aa16■□□□□ 0.15
AP000439.1-201ENST00000544004 LINC00116Q8NCU8 138 aa16■□□□□ 0.15
AP000439.1-201ENST00000544004 RBM46Q8TBY0 533 aaKnown RBP16■□□□□ 0.15
AP000439.1-201ENST00000544004 CYP27B1O15528 508 aa15.99■□□□□ 0.15
AP000439.1-201ENST00000544004 NEUROD1Q13562 356 aa15.99■□□□□ 0.15
AP000439.1-201ENST00000544004 C16orf71Q8IYS4 520 aaPredicted RBP15.99■□□□□ 0.15
AP000439.1-201ENST00000544004 CARD11Q9BXL7 1154 aa15.99■□□□□ 0.15
AP000439.1-201ENST00000544004 SMG6Q86US8 1419 aaKnown RBP15.99■□□□□ 0.15
AP000439.1-201ENST00000544004 A0A0G2JLW4 131 aa15.98■□□□□ 0.15
AP000439.1-201ENST00000544004 MMP10P09238 476 aa15.98■□□□□ 0.15
AP000439.1-201ENST00000544004 PRELPP51888 382 aa15.98■□□□□ 0.15
AP000439.1-201ENST00000544004 TGFB2P61812 414 aa15.98■□□□□ 0.15
AP000439.1-201ENST00000544004 PIGBQ92521 554 aa15.98■□□□□ 0.15
AP000439.1-201ENST00000544004 LOC102724428A0A0B4J2F2 783 aa15.97■□□□□ 0.15
AP000439.1-201ENST00000544004 GNPATO15228 680 aa15.97■□□□□ 0.15
AP000439.1-201ENST00000544004 SIK1P57059 783 aa15.97■□□□□ 0.15
AP000439.1-201ENST00000544004 PUS7Q96PZ0 661 aaKnown RBP15.97■□□□□ 0.15
AP000439.1-201ENST00000544004 FSTL1Q12841 308 aa15.96■□□□□ 0.15
AP000439.1-201ENST00000544004 BRCA1P38398 1863 aaKnown RBP15.96■□□□□ 0.15
AP000439.1-201ENST00000544004 PCNTO95613 3336 aa15.96■□□□□ 0.15
AP000439.1-201ENST00000544004 PKD1L3Q7Z443 1732 aa15.95■□□□□ 0.14
AP000439.1-201ENST00000544004 FCHSD2O94868 740 aa15.95■□□□□ 0.14
AP000439.1-201ENST00000544004 HSP90AB2PQ58FF8 381 aa15.95■□□□□ 0.14
AP000439.1-201ENST00000544004 DPEP1P16444 411 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms