RNA–Protein interactions for RNA: ENST00000543824.5

PHC1-212, Transcript of polyhomeotic homolog 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHC1, Length 4,292 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC1-212ENST00000543824 PIK3C2GO75747 1445 aa21.67■■□□□ 1.06
PHC1-212ENST00000543824 AIMP1Q12904 312 aaKnown RBP21.66■■□□□ 1.06
PHC1-212ENST00000543824 TFIP11Q9UBB9 837 aaKnown RBP21.66■■□□□ 1.06
PHC1-212ENST00000543824 TAF7LQ5H9L4 462 aa21.66■■□□□ 1.06
PHC1-212ENST00000543824 TAF3Q5VWG9 929 aa21.66■■□□□ 1.06
PHC1-212ENST00000543824 CNPY2Q9Y2B0 182 aa21.66■■□□□ 1.06
PHC1-212ENST00000543824 STX6O43752 255 aa21.66■■□□□ 1.06
PHC1-212ENST00000543824 UVSSAQ2YD98 709 aa21.66■■□□□ 1.06
PHC1-212ENST00000543824 TTLL5Q6EMB2 1281 aa21.66■■□□□ 1.06
PHC1-212ENST00000543824 CLIP2Q9UDT6 1046 aa21.66■■□□□ 1.06
PHC1-212ENST00000543824 FAM83GA6ND36 823 aa21.65■■□□□ 1.06
PHC1-212ENST00000543824 KDM4AO75164 1064 aa21.65■■□□□ 1.06
PHC1-212ENST00000543824 BLOC1S2Q6QNY1 142 aa21.65■■□□□ 1.06
PHC1-212ENST00000543824 SMAP1Q8IYB5 467 aaPredicted RBP21.65■■□□□ 1.06
PHC1-212ENST00000543824 RASSF8Q8NHQ8 419 aa21.65■■□□□ 1.06
PHC1-212ENST00000543824 BBXQ8WY36 941 aaPredicted RBP21.65■■□□□ 1.06
PHC1-212ENST00000543824 UHRF1BP1Q6BDS2 1440 aa21.65■■□□□ 1.06
PHC1-212ENST00000543824 NOC3LQ8WTT2 800 aaKnown RBP21.65■■□□□ 1.06
PHC1-212ENST00000543824 NEXNQ0ZGT2 675 aa21.64■■□□□ 1.06
PHC1-212ENST00000543824 MBIPQ9NS73 344 aa21.64■■□□□ 1.06
PHC1-212ENST00000543824 HDGFL1Q5TGJ6 251 aa21.64■■□□□ 1.05
PHC1-212ENST00000543824 PRPF40BQ6NWY9 871 aaKnown RBP21.64■■□□□ 1.05
PHC1-212ENST00000543824 DDX11Q96FC9 970 aa21.64■■□□□ 1.05
PHC1-212ENST00000543824 CWC15Q9P013 229 aaKnown RBP21.64■■□□□ 1.05
PHC1-212ENST00000543824 POLR3AO14802 1390 aaPredicted RBP21.64■■□□□ 1.05
PHC1-212ENST00000543824 COL17A1Q9UMD9 1497 aaPredicted RBP21.64■■□□□ 1.05
PHC1-212ENST00000543824 ZNF445P59923 1031 aa21.64■■□□□ 1.05
PHC1-212ENST00000543824 UBE2HP62256 183 aa21.64■■□□□ 1.05
PHC1-212ENST00000543824 EMILIN1Q9Y6C2 1016 aa21.64■■□□□ 1.05
PHC1-212ENST00000543824 TPM1P09493 284 aa21.63■■□□□ 1.05
PHC1-212ENST00000543824 LIMCH1Q9UPQ0 1083 aa21.63■■□□□ 1.05
PHC1-212ENST00000543824 USP19O94966 1318 aa21.63■■□□□ 1.05
PHC1-212ENST00000543824 CC2D2AQ9P2K1 1620 aa21.63■■□□□ 1.05
PHC1-212ENST00000543824 UBXN4Q92575 508 aa21.63■■□□□ 1.05
PHC1-212ENST00000543824 CHMP4CQ96CF2 233 aa21.63■■□□□ 1.05
PHC1-212ENST00000543824 SPG7Q9UQ90 795 aa21.63■■□□□ 1.05
PHC1-212ENST00000543824 NUTM2GQ5VZR2 741 aa21.62■■□□□ 1.05
PHC1-212ENST00000543824 CPLX2Q6PUV4 134 aaKnown RBP21.62■■□□□ 1.05
PHC1-212ENST00000543824 CCDC186Q7Z3E2 898 aa21.62■■□□□ 1.05
PHC1-212ENST00000543824 ZSCAN31Q96LW9 406 aaPredicted RBP21.62■■□□□ 1.05
PHC1-212ENST00000543824 KIF18AQ8NI77 898 aa21.62■■□□□ 1.05
PHC1-212ENST00000543824 MEIS3Q99687 375 aa21.62■■□□□ 1.05
PHC1-212ENST00000543824 LMBRD1Q9NUN5 540 aa21.62■■□□□ 1.05
PHC1-212ENST00000543824 PPP6R1Q9UPN7 881 aa21.62■■□□□ 1.05
PHC1-212ENST00000543824 NOM1Q5C9Z4 860 aaKnown RBP21.61■■□□□ 1.05
PHC1-212ENST00000543824 PLEKHM2Q8IWE5 1019 aa21.61■■□□□ 1.05
PHC1-212ENST00000543824 TSPYL6Q8N831 410 aa21.61■■□□□ 1.05
PHC1-212ENST00000543824 ERBB4Q15303 1308 aa21.61■■□□□ 1.05
PHC1-212ENST00000543824 STK38Q15208 465 aa21.61■■□□□ 1.05
PHC1-212ENST00000543824 NOL12Q9UGY1 213 aaKnown RBP eCLIP21.61■■□□□ 1.05
PHC1-212ENST00000543824 V9GYY5 206 aaPredicted RBP21.61■■□□□ 1.05
PHC1-212ENST00000543824 PPP1R9BQ96SB3 815 aa21.61■■□□□ 1.05
PHC1-212ENST00000543824 USP26Q9BXU7 913 aa21.61■■□□□ 1.05
PHC1-212ENST00000543824 POLR3GO15318 223 aaPredicted RBP21.6■■□□□ 1.05
PHC1-212ENST00000543824 CHAMP1Q96JM3 812 aa21.6■■□□□ 1.05
PHC1-212ENST00000543824 NEUROD6Q96NK8 337 aa21.6■■□□□ 1.05
PHC1-212ENST00000543824 SERPINC1P01008 464 aa21.6■■□□□ 1.05
PHC1-212ENST00000543824 CEP57L1Q8IYX8 460 aa21.6■■□□□ 1.05
PHC1-212ENST00000543824 IL16Q14005 1332 aa21.6■■□□□ 1.05
PHC1-212ENST00000543824 ZNF165P49910 485 aa21.6■■□□□ 1.05
PHC1-212ENST00000543824 TSR1Q2NL82 804 aaKnown RBP21.6■■□□□ 1.05
PHC1-212ENST00000543824 CSB-PGBD3P0DP91 1061 aa21.59■■□□□ 1.05
PHC1-212ENST00000543824 DNAJC2Q99543 621 aaKnown RBP21.59■■□□□ 1.05
PHC1-212ENST00000543824 SIL1Q9H173 461 aa21.59■■□□□ 1.05
PHC1-212ENST00000543824 TMEM63CQ9P1W3 806 aa21.59■■□□□ 1.05
PHC1-212ENST00000543824 PKP1Q13835 747 aa21.59■■□□□ 1.05
PHC1-212ENST00000543824 TRIM29Q14134 588 aa21.59■■□□□ 1.05
PHC1-212ENST00000543824 GJB2P29033 226 aa21.58■■□□□ 1.05
PHC1-212ENST00000543824 OTUD7AQ8TE49 926 aaPredicted RBP21.58■■□□□ 1.05
PHC1-212ENST00000543824 TERF1P54274 439 aa21.58■■□□□ 1.04
PHC1-212ENST00000543824 C1orf141Q5JVX7 400 aa21.58■■□□□ 1.04
PHC1-212ENST00000543824 OLFM4Q6UX06 510 aa21.58■■□□□ 1.04
PHC1-212ENST00000543824 ANKRD1Q15327 319 aa21.58■■□□□ 1.04
PHC1-212ENST00000543824 APPP05067 770 aa21.57■■□□□ 1.04
PHC1-212ENST00000543824 GTF2F1P35269 517 aaKnown RBP eCLIP21.57■■□□□ 1.04
PHC1-212ENST00000543824 PDE1AP54750 535 aa21.57■■□□□ 1.04
PHC1-212ENST00000543824 LEKR1Q6ZMV7 388 aa21.57■■□□□ 1.04
PHC1-212ENST00000543824 ARHGAP45Q92619 1136 aa21.57■■□□□ 1.04
PHC1-212ENST00000543824 ARHGEF12Q9NZN5 1544 aa21.57■■□□□ 1.04
PHC1-212ENST00000543824 RAB11FIP3O75154 756 aa21.57■■□□□ 1.04
PHC1-212ENST00000543824 ZSCAN22P10073 491 aaPredicted RBP21.57■■□□□ 1.04
PHC1-212ENST00000543824 TMCO3Q6UWJ1 677 aa21.57■■□□□ 1.04
PHC1-212ENST00000543824 C8orf58Q8NAV2 365 aa21.57■■□□□ 1.04
PHC1-212ENST00000543824 SCAND2PQ9GZW5 306 aaPredicted RBP21.57■■□□□ 1.04
PHC1-212ENST00000543824 GTPBP4Q9BZE4 634 aaKnown RBP21.57■■□□□ 1.04
PHC1-212ENST00000543824 SETQ01105 290 aaPredicted RBP21.56■■□□□ 1.04
PHC1-212ENST00000543824 MRPL50Q8N5N7 158 aaKnown RBP21.56■■□□□ 1.04
PHC1-212ENST00000543824 ZNF396Q96N95 335 aaPredicted RBP21.56■■□□□ 1.04
PHC1-212ENST00000543824 CFAP45Q9UL16 551 aa21.56■■□□□ 1.04
PHC1-212ENST00000543824 ATAD2Q6PL18 1390 aa21.56■■□□□ 1.04
PHC1-212ENST00000543824 AK7Q96M32 723 aa21.56■■□□□ 1.04
PHC1-212ENST00000543824 KDM6BO15054 1643 aa21.55■■□□□ 1.04
PHC1-212ENST00000543824 ZBTB7BO15156 539 aaPredicted RBP21.55■■□□□ 1.04
PHC1-212ENST00000543824 CD2BP2O95400 341 aaKnown RBP21.55■■□□□ 1.04
PHC1-212ENST00000543824 DDX58O95786 925 aaKnown RBP21.55■■□□□ 1.04
PHC1-212ENST00000543824 ANKRD44Q8N8A2 993 aa21.55■■□□□ 1.04
PHC1-212ENST00000543824 LRRFIP2Q9Y608 721 aaKnown RBP21.55■■□□□ 1.04
PHC1-212ENST00000543824 ZNF521Q96K83 1311 aa21.55■■□□□ 1.04
PHC1-212ENST00000543824 AACSQ86V21 672 aa21.55■■□□□ 1.04
PHC1-212ENST00000543824 TXNDC2Q86VQ3 553 aa21.55■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 419.5 ms