RNA–Protein interactions for RNA: ENST00000543729.5

TRIM46-209, Transcript of tripartite motif containing 46, humanhuman

TSL 5 BASIC

Gene TRIM46, Length 1,703 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM46-209ENST00000543729 PPP1R1BQ9UD71 204 aaPredicted RBP21.5■■□□□ 1.03
TRIM46-209ENST00000543729 ANKRD26Q9UPS8 1709 aa21.49■■□□□ 1.03
TRIM46-209ENST00000543729 SUPT16HQ9Y5B9 1047 aaKnown RBP21.49■■□□□ 1.03
TRIM46-209ENST00000543729 CASZ1Q86V15 1759 aa21.48■■□□□ 1.03
TRIM46-209ENST00000543729 MAP3K19Q56UN5 1328 aa21.48■■□□□ 1.03
TRIM46-209ENST00000543729 ACSBG1Q96GR2 724 aa21.48■■□□□ 1.03
TRIM46-209ENST00000543729 PRKRIP1Q9H875 184 aaPredicted RBP21.48■■□□□ 1.03
TRIM46-209ENST00000543729 STK32BQ9NY57 414 aa21.48■■□□□ 1.03
TRIM46-209ENST00000543729 LTV1Q96GA3 475 aaPredicted RBP21.47■■□□□ 1.03
TRIM46-209ENST00000543729 AMPHP49418 695 aa21.46■■□□□ 1.03
TRIM46-209ENST00000543729 HOXC9P31274 260 aa21.46■■□□□ 1.03
TRIM46-209ENST00000543729 KAT6BQ8WYB5 2073 aa21.45■■□□□ 1.02
TRIM46-209ENST00000543729 TNNT2P45379 298 aaPredicted RBP21.45■■□□□ 1.02
TRIM46-209ENST00000543729 SLC15A2Q16348 729 aa21.44■■□□□ 1.02
TRIM46-209ENST00000543729 RTL1A6NKG5 1358 aa21.44■■□□□ 1.02
TRIM46-209ENST00000543729 BTAF1O14981 1849 aa21.43■■□□□ 1.02
TRIM46-209ENST00000543729 FBLN1P23142 703 aa21.41■■□□□ 1.02
TRIM46-209ENST00000543729 RALBP1Q15311 655 aa21.41■■□□□ 1.02
TRIM46-209ENST00000543729 DDX54Q8TDD1 881 aaKnown RBP21.41■■□□□ 1.02
TRIM46-209ENST00000543729 PDGFDQ9GZP0 370 aaPredicted RBP21.41■■□□□ 1.02
TRIM46-209ENST00000543729 ZBTB7AO95365 584 aa21.4■■□□□ 1.02
TRIM46-209ENST00000543729 DCAF8L1A6NGE4 600 aa21.38■■□□□ 1.01
TRIM46-209ENST00000543729 RRS1Q15050 365 aaKnown RBP21.38■■□□□ 1.01
TRIM46-209ENST00000543729 RGPD2P0DJD1 1756 aa21.38■■□□□ 1.01
TRIM46-209ENST00000543729 PAPPAQ13219 1627 aa21.38■■□□□ 1.01
TRIM46-209ENST00000543729 SMG6Q86US8 1419 aaKnown RBP21.37■■□□□ 1.01
TRIM46-209ENST00000543729 ZCRB1Q8TBF4 217 aaKnown RBP21.37■■□□□ 1.01
TRIM46-209ENST00000543729 PPM1GO15355 546 aaPredicted RBP21.36■■□□□ 1.01
TRIM46-209ENST00000543729 PTGER2P43116 358 aa21.35■■□□□ 1.01
TRIM46-209ENST00000543729 MTFR1LQ9H019 292 aa21.35■■□□□ 1.01
TRIM46-209ENST00000543729 ATF5Q9Y2D1 282 aaPredicted RBP21.35■■□□□ 1.01
TRIM46-209ENST00000543729 SLC27A3Q5K4L6 730 aa21.35■■□□□ 1.01
TRIM46-209ENST00000543729 MEGF6O75095 1541 aa21.34■■□□□ 1.01
TRIM46-209ENST00000543729 KIF24Q5T7B8 1368 aa21.34■■□□□ 1.01
TRIM46-209ENST00000543729 SHANK3Q9BYB0 1731 aa21.33■■□□□ 1.01
TRIM46-209ENST00000543729 NBPF6Q5VWK0 638 aa21.33■■□□□ 1.01
TRIM46-209ENST00000543729 NBPF4Q96M43 638 aa21.33■■□□□ 1.01
TRIM46-209ENST00000543729 INSRP06213 1382 aa21.33■■□□□ 1
TRIM46-209ENST00000543729 DOT1LQ8TEK3 1739 aa21.33■■□□□ 1
TRIM46-209ENST00000543729 PPP2R1AP30153 589 aa21.32■■□□□ 1
TRIM46-209ENST00000543729 SYTL4Q96C24 671 aaPredicted RBP21.32■■□□□ 1
TRIM46-209ENST00000543729 LRRC4BQ9NT99 713 aa21.32■■□□□ 1
TRIM46-209ENST00000543729 POLKQ9UBT6 870 aa21.32■■□□□ 1
TRIM46-209ENST00000543729 MYBBP1AQ9BQG0 1328 aaKnown RBP21.32■■□□□ 1
TRIM46-209ENST00000543729 FLT4P35916 1363 aa21.32■■□□□ 1
TRIM46-209ENST00000543729 PRIM1P49642 420 aaKnown RBP21.32■■□□□ 1
TRIM46-209ENST00000543729 RAPGEF4Q8WZA2 1011 aa21.32■■□□□ 1
TRIM46-209ENST00000543729 EMILIN1Q9Y6C2 1016 aa21.32■■□□□ 1
TRIM46-209ENST00000543729 MAP2P11137 1827 aaKnown RBP21.31■■□□□ 1
TRIM46-209ENST00000543729 NEFLP07196 543 aa21.3■■□□□ 1
TRIM46-209ENST00000543729 MTHFSP49914 203 aa21.3■■□□□ 1
TRIM46-209ENST00000543729 HNRNPUQ00839 825 aaKnown RBP eCLIP21.3■■□□□ 1
TRIM46-209ENST00000543729 ZNF827Q17R98 1081 aa21.3■■□□□ 1
TRIM46-209ENST00000543729 TATP17735 454 aaPredicted RBP21.29■■□□□ 1
TRIM46-209ENST00000543729 HSP90AB2PQ58FF8 381 aa21.29■■□□□ 1
TRIM46-209ENST00000543729 USHBP1Q8N6Y0 703 aa21.29■■□□□ 1
TRIM46-209ENST00000543729 CFAP53Q96M91 514 aa21.29■■□□□ 1
TRIM46-209ENST00000543729 YY1P25490 414 aa21.29■■□□□ 1
TRIM46-209ENST00000543729 MRS2Q9HD23 443 aa21.29■■□□□ 1
TRIM46-209ENST00000543729 AKT1S1Q96B36 256 aa21.28■■□□□ 1
TRIM46-209ENST00000543729 SGIP1Q9BQI5 828 aa21.28■■□□□ 1
TRIM46-209ENST00000543729 QSER1Q2KHR3 1735 aa21.27■■□□□ 1
TRIM46-209ENST00000543729 LY75O60449 1722 aa21.27■■□□□ 1
TRIM46-209ENST00000543729 SLC16A10Q8TF71 515 aa21.26■□□□□ 0.99
TRIM46-209ENST00000543729 ZBED9Q6R2W3 1325 aa21.25■□□□□ 0.99
TRIM46-209ENST00000543729 FHDC1Q9C0D6 1143 aaPredicted RBP21.25■□□□□ 0.99
TRIM46-209ENST00000543729 PCDH11XQ9BZA7 1347 aa21.24■□□□□ 0.99
TRIM46-209ENST00000543729 PCDH11YQ9BZA8 1340 aa21.24■□□□□ 0.99
TRIM46-209ENST00000543729 ARXQ96QS3 562 aa21.24■□□□□ 0.99
TRIM46-209ENST00000543729 SYT17Q9BSW7 474 aa21.24■□□□□ 0.99
TRIM46-209ENST00000543729 TFCP2L1Q9NZI6 479 aa21.23■□□□□ 0.99
TRIM46-209ENST00000543729 CCNL1Q9UK58 526 aaPredicted RBP21.22■□□□□ 0.99
TRIM46-209ENST00000543729 CCDC184Q52MB2 194 aa21.21■□□□□ 0.99
TRIM46-209ENST00000543729 PNPLA7Q6ZV29 1317 aa21.21■□□□□ 0.99
TRIM46-209ENST00000543729 KCNQ4P56696 695 aa21.21■□□□□ 0.99
TRIM46-209ENST00000543729 MAP3K5Q99683 1374 aa21.21■□□□□ 0.99
TRIM46-209ENST00000543729 HMGB2P26583 209 aaKnown RBP21.2■□□□□ 0.98
TRIM46-209ENST00000543729 FKBP8Q14318 412 aa21.2■□□□□ 0.98
TRIM46-209ENST00000543729 TUBGCP6Q96RT7 1819 aa21.2■□□□□ 0.98
TRIM46-209ENST00000543729 DIAPH1O60610 1272 aaKnown RBP21.19■□□□□ 0.98
TRIM46-209ENST00000543729 ERICH6BQ5W0A0 696 aa21.19■□□□□ 0.98
TRIM46-209ENST00000543729 NCAPD2Q15021 1401 aa21.19■□□□□ 0.98
TRIM46-209ENST00000543729 POLD1P28340 1107 aa21.18■□□□□ 0.98
TRIM46-209ENST00000543729 NUDCQ9Y266 331 aa21.18■□□□□ 0.98
TRIM46-209ENST00000543729 PKD1L3Q7Z443 1732 aa21.18■□□□□ 0.98
TRIM46-209ENST00000543729 COL24A1Q17RW2 1714 aa21.18■□□□□ 0.98
TRIM46-209ENST00000543729 CYP27B1O15528 508 aa21.17■□□□□ 0.98
TRIM46-209ENST00000543729 EIF4A2Q14240 407 aaKnown RBP21.16■□□□□ 0.98
TRIM46-209ENST00000543729 SPG7Q9UQ90 795 aa21.15■□□□□ 0.98
TRIM46-209ENST00000543729 U2SURPO15042 1029 aaKnown RBP21.14■□□□□ 0.97
TRIM46-209ENST00000543729 MPRIPQ6WCQ1 1025 aa21.14■□□□□ 0.97
TRIM46-209ENST00000543729 FAM9BQ8IZU0 186 aa21.14■□□□□ 0.97
TRIM46-209ENST00000543729 PALLDQ8WX93 1383 aa21.14■□□□□ 0.97
TRIM46-209ENST00000543729 COL3A1P02461 1466 aaPredicted RBP21.14■□□□□ 0.97
TRIM46-209ENST00000543729 C5P01031 1676 aa21.13■□□□□ 0.97
TRIM46-209ENST00000543729 SMARCC1Q92922 1105 aaPredicted RBP21.13■□□□□ 0.97
TRIM46-209ENST00000543729 EYA1Q99502 592 aa21.13■□□□□ 0.97
TRIM46-209ENST00000543729 ITGB4P16144 1822 aa21.13■□□□□ 0.97
TRIM46-209ENST00000543729 TOGARAM1Q9Y4F4 1720 aa21.13■□□□□ 0.97
TRIM46-209ENST00000543729 IL13P35225 146 aa21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms