RNA–Protein interactions for RNA: ENST00000543585.1

SCNN1A-220, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 4

Gene SCNN1A, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-220ENST00000543585 KNSTRNQ9Y448 316 aa21.7■■□□□ 1.06
SCNN1A-220ENST00000543585 SRCAPQ6ZRS2 3230 aa21.7■■□□□ 1.06
SCNN1A-220ENST00000543585 KCNQ2O43526 872 aa21.68■■□□□ 1.06
SCNN1A-220ENST00000543585 BCL11BQ9C0K0 894 aaPredicted RBP21.68■■□□□ 1.06
SCNN1A-220ENST00000543585 MORC1Q86VD1 984 aa21.67■■□□□ 1.06
SCNN1A-220ENST00000543585 ITGB4P16144 1822 aa21.66■■□□□ 1.06
SCNN1A-220ENST00000543585 PARD3Q8TEW0 1356 aa21.66■■□□□ 1.06
SCNN1A-220ENST00000543585 ACSBG1Q96GR2 724 aa21.66■■□□□ 1.06
SCNN1A-220ENST00000543585 TOGARAM1Q9Y4F4 1720 aa21.66■■□□□ 1.06
SCNN1A-220ENST00000543585 EIF4A2Q14240 407 aaKnown RBP21.65■■□□□ 1.06
SCNN1A-220ENST00000543585 DDX54Q8TDD1 881 aaKnown RBP21.65■■□□□ 1.06
SCNN1A-220ENST00000543585 EYA1Q99502 592 aa21.65■■□□□ 1.06
SCNN1A-220ENST00000543585 ZCRB1Q8TBF4 217 aaKnown RBP21.63■■□□□ 1.05
SCNN1A-220ENST00000543585 PSDA5PKW4 1024 aaPredicted RBP21.62■■□□□ 1.05
SCNN1A-220ENST00000543585 PLSCR1O15162 318 aa21.62■■□□□ 1.05
SCNN1A-220ENST00000543585 PROM2Q8N271 834 aa21.61■■□□□ 1.05
SCNN1A-220ENST00000543585 RAPGEF4Q8WZA2 1011 aa21.61■■□□□ 1.05
SCNN1A-220ENST00000543585 LY75O60449 1722 aa21.6■■□□□ 1.05
SCNN1A-220ENST00000543585 TATP17735 454 aaPredicted RBP21.6■■□□□ 1.05
SCNN1A-220ENST00000543585 CC2D1BQ5T0F9 858 aaKnown RBP21.59■■□□□ 1.05
SCNN1A-220ENST00000543585 NPC1L1Q9UHC9 1359 aa21.59■■□□□ 1.05
SCNN1A-220ENST00000543585 IGSF1Q8N6C5 1336 aa21.57■■□□□ 1.04
SCNN1A-220ENST00000543585 VIRMAQ69YN4 1812 aaKnown RBP21.57■■□□□ 1.04
SCNN1A-220ENST00000543585 R3HDM1Q15032 1099 aaKnown RBP21.57■■□□□ 1.04
SCNN1A-220ENST00000543585 PAPPAQ13219 1627 aa21.57■■□□□ 1.04
SCNN1A-220ENST00000543585 LRP5O75197 1615 aa21.56■■□□□ 1.04
SCNN1A-220ENST00000543585 CYP27B1O15528 508 aa21.56■■□□□ 1.04
SCNN1A-220ENST00000543585 TUBGCP6Q96RT7 1819 aa21.55■■□□□ 1.04
SCNN1A-220ENST00000543585 CASZ1Q86V15 1759 aa21.54■■□□□ 1.04
SCNN1A-220ENST00000543585 CNGB1Q14028 1251 aaPredicted RBP21.54■■□□□ 1.04
SCNN1A-220ENST00000543585 ANO8Q9HCE9 1232 aaPredicted RBP21.54■■□□□ 1.04
SCNN1A-220ENST00000543585 PCDH11XQ9BZA7 1347 aa21.54■■□□□ 1.04
SCNN1A-220ENST00000543585 PCDH11YQ9BZA8 1340 aa21.54■■□□□ 1.04
SCNN1A-220ENST00000543585 PRIM1P49642 420 aaKnown RBP21.53■■□□□ 1.04
SCNN1A-220ENST00000543585 MTHFSP49914 203 aa21.53■■□□□ 1.04
SCNN1A-220ENST00000543585 TXNRD1Q16881 649 aa21.53■■□□□ 1.04
SCNN1A-220ENST00000543585 IL13P35225 146 aa21.52■■□□□ 1.04
SCNN1A-220ENST00000543585 COL3A1P02461 1466 aaPredicted RBP21.52■■□□□ 1.03
SCNN1A-220ENST00000543585 TAF1LQ8IZX4 1826 aa21.51■■□□□ 1.03
SCNN1A-220ENST00000543585 AEBP1Q8IUX7 1158 aa21.51■■□□□ 1.03
SCNN1A-220ENST00000543585 SYTL4Q96C24 671 aaPredicted RBP21.49■■□□□ 1.03
SCNN1A-220ENST00000543585 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.48■■□□□ 1.03
SCNN1A-220ENST00000543585 KDRP35968 1356 aa21.48■■□□□ 1.03
SCNN1A-220ENST00000543585 QSER1Q2KHR3 1735 aa21.47■■□□□ 1.03
SCNN1A-220ENST00000543585 NBPF14Q5TI25 921 aa21.47■■□□□ 1.03
SCNN1A-220ENST00000543585 LRRC4BQ9NT99 713 aa21.47■■□□□ 1.03
SCNN1A-220ENST00000543585 PLEKHG2Q9H7P9 1386 aa21.47■■□□□ 1.03
SCNN1A-220ENST00000543585 SCN11AQ9UI33 1791 aa21.46■■□□□ 1.03
SCNN1A-220ENST00000543585 NKX1-1Q15270 411 aaPredicted RBP21.46■■□□□ 1.03
SCNN1A-220ENST00000543585 SPG7Q9UQ90 795 aa21.46■■□□□ 1.03
SCNN1A-220ENST00000543585 PHKG2P15735 406 aa21.45■■□□□ 1.02
SCNN1A-220ENST00000543585 C5P01031 1676 aa21.44■■□□□ 1.02
SCNN1A-220ENST00000543585 SULT6B1Q6IMI4 303 aa21.44■■□□□ 1.02
SCNN1A-220ENST00000543585 KCNQ4P56696 695 aa21.43■■□□□ 1.02
SCNN1A-220ENST00000543585 PDGFDQ9GZP0 370 aaPredicted RBP21.43■■□□□ 1.02
SCNN1A-220ENST00000543585 IFNL2Q8IZJ0 200 aa21.41■■□□□ 1.02
SCNN1A-220ENST00000543585 KDM6AO15550 1401 aaPredicted RBP21.4■■□□□ 1.02
SCNN1A-220ENST00000543585 ZNF827Q17R98 1081 aa21.4■■□□□ 1.02
SCNN1A-220ENST00000543585 MPRIPQ6WCQ1 1025 aa21.4■■□□□ 1.02
SCNN1A-220ENST00000543585 DIAPH1O60610 1272 aaKnown RBP21.39■■□□□ 1.01
SCNN1A-220ENST00000543585 HMOX1P09601 288 aa21.39■■□□□ 1.01
SCNN1A-220ENST00000543585 SLC15A2Q16348 729 aa21.39■■□□□ 1.01
SCNN1A-220ENST00000543585 PIGBQ92521 554 aa21.39■■□□□ 1.01
SCNN1A-220ENST00000543585 PPP2R1AP30153 589 aa21.38■■□□□ 1.01
SCNN1A-220ENST00000543585 PLEKHO1Q53GL0 409 aaPredicted RBP21.38■■□□□ 1.01
SCNN1A-220ENST00000543585 SLC27A3Q5K4L6 730 aa21.38■■□□□ 1.01
SCNN1A-220ENST00000543585 ZNF530Q6P9A1 599 aaPredicted RBP21.37■■□□□ 1.01
SCNN1A-220ENST00000543585 STK32BQ9NY57 414 aa21.37■■□□□ 1.01
SCNN1A-220ENST00000543585 ADAMTS7Q9UKP4 1686 aa21.37■■□□□ 1.01
SCNN1A-220ENST00000543585 PALLDQ8WX93 1383 aa21.36■■□□□ 1.01
SCNN1A-220ENST00000543585 AKT1S1Q96B36 256 aa21.36■■□□□ 1.01
SCNN1A-220ENST00000543585 COL24A1Q17RW2 1714 aa21.35■■□□□ 1.01
SCNN1A-220ENST00000543585 UBR3Q6ZT12 1888 aa21.35■■□□□ 1.01
SCNN1A-220ENST00000543585 AMOTQ4VCS5 1084 aa21.35■■□□□ 1.01
SCNN1A-220ENST00000543585 CCNL1Q9UK58 526 aaPredicted RBP21.34■■□□□ 1.01
SCNN1A-220ENST00000543585 C4BP0C0L5 1744 aa21.34■■□□□ 1.01
SCNN1A-220ENST00000543585 ZNF831Q5JPB2 1677 aa21.32■■□□□ 1
SCNN1A-220ENST00000543585 ASAP1Q9ULH1 1129 aa21.32■■□□□ 1
SCNN1A-220ENST00000543585 COL5A3P25940 1745 aaPredicted RBP21.32■■□□□ 1
SCNN1A-220ENST00000543585 DDX10Q13206 875 aaKnown RBP21.31■■□□□ 1
SCNN1A-220ENST00000543585 DCAF5Q96JK2 942 aa21.31■■□□□ 1
SCNN1A-220ENST00000543585 TMOD3Q9NYL9 352 aa21.31■■□□□ 1
SCNN1A-220ENST00000543585 MYH14Q7Z406 1995 aaKnown RBP21.3■■□□□ 1
SCNN1A-220ENST00000543585 U2SURPO15042 1029 aaKnown RBP21.3■■□□□ 1
SCNN1A-220ENST00000543585 ATG3Q9NT62 314 aa21.3■■□□□ 1
SCNN1A-220ENST00000543585 SIPA1L3O60292 1781 aaPredicted RBP21.3■■□□□ 1
SCNN1A-220ENST00000543585 DLG5Q8TDM6 1919 aa21.29■■□□□ 1
SCNN1A-220ENST00000543585 ERVV-2B6SEH9 535 aa21.29■■□□□ 1
SCNN1A-220ENST00000543585 ZBTB7AO95365 584 aa21.29■■□□□ 1
SCNN1A-220ENST00000543585 HSP90AB1P08238 724 aaKnown RBP21.29■■□□□ 1
SCNN1A-220ENST00000543585 MTHFSDQ2M296 383 aaKnown RBP21.29■■□□□ 1
SCNN1A-220ENST00000543585 PNPLA7Q6ZV29 1317 aa21.29■■□□□ 1
SCNN1A-220ENST00000543585 MRC1P22897 1456 aa21.28■■□□□ 1
SCNN1A-220ENST00000543585 C1orf141Q5JVX7 400 aa21.28■■□□□ 1
SCNN1A-220ENST00000543585 SMARCC1Q92922 1105 aaPredicted RBP21.28■■□□□ 1
SCNN1A-220ENST00000543585 AKAP4Q5JQC9 854 aa21.27■■□□□ 1
SCNN1A-220ENST00000543585 SPON1Q9HCB6 807 aa21.27■■□□□ 1
SCNN1A-220ENST00000543585 TJP1Q07157 1748 aa21.26■□□□□ 0.99
SCNN1A-220ENST00000543585 CFAP53Q96M91 514 aa21.26■□□□□ 0.99
SCNN1A-220ENST00000543585 LOC102724428A0A0B4J2F2 783 aa21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms