RNA–Protein interactions for RNA: ENST00000543537.5

COPS7A-217, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 5

Gene COPS7A, Length 802 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-217ENST00000543537 NCAPD2Q15021 1401 aa15.42■□□□□ 0.06
COPS7A-217ENST00000543537 SMG6Q86US8 1419 aaKnown RBP15.42■□□□□ 0.06
COPS7A-217ENST00000543537 ANKRD26Q9UPS8 1709 aa15.41■□□□□ 0.06
COPS7A-217ENST00000543537 KCNQ2O43526 872 aa15.41■□□□□ 0.06
COPS7A-217ENST00000543537 LTV1Q96GA3 475 aaPredicted RBP15.41■□□□□ 0.06
COPS7A-217ENST00000543537 MEGF6O75095 1541 aa15.4■□□□□ 0.06
COPS7A-217ENST00000543537 HSP90AB2PQ58FF8 381 aa15.4■□□□□ 0.06
COPS7A-217ENST00000543537 NBPF6Q5VWK0 638 aa15.4■□□□□ 0.06
COPS7A-217ENST00000543537 NBPF4Q96M43 638 aa15.4■□□□□ 0.06
COPS7A-217ENST00000543537 TXNRD1Q16881 649 aa15.39■□□□□ 0.05
COPS7A-217ENST00000543537 ANO8Q9HCE9 1232 aaPredicted RBP15.39■□□□□ 0.05
COPS7A-217ENST00000543537 MRS2Q9HD23 443 aa15.39■□□□□ 0.05
COPS7A-217ENST00000543537 ZCRB1Q8TBF4 217 aaKnown RBP15.38■□□□□ 0.05
COPS7A-217ENST00000543537 RGPD2P0DJD1 1756 aa15.38■□□□□ 0.05
COPS7A-217ENST00000543537 NSD2O96028 1365 aa15.37■□□□□ 0.05
COPS7A-217ENST00000543537 SHANK3Q9BYB0 1731 aa15.37■□□□□ 0.05
COPS7A-217ENST00000543537 EMILIN1Q9Y6C2 1016 aa15.37■□□□□ 0.05
COPS7A-217ENST00000543537 DDX54Q8TDD1 881 aaKnown RBP15.36■□□□□ 0.05
COPS7A-217ENST00000543537 ACSBG1Q96GR2 724 aa15.36■□□□□ 0.05
COPS7A-217ENST00000543537 YTHDC1Q96MU7 727 aaKnown RBP15.36■□□□□ 0.05
COPS7A-217ENST00000543537 POLKQ9UBT6 870 aa15.36■□□□□ 0.05
COPS7A-217ENST00000543537 BTAF1O14981 1849 aa15.36■□□□□ 0.05
COPS7A-217ENST00000543537 PLEKHG2Q9H7P9 1386 aa15.36■□□□□ 0.05
COPS7A-217ENST00000543537 RAPGEF4Q8WZA2 1011 aa15.35■□□□□ 0.05
COPS7A-217ENST00000543537 PAPPAQ13219 1627 aa15.35■□□□□ 0.05
COPS7A-217ENST00000543537 CASZ1Q86V15 1759 aa15.34■□□□□ 0.05
COPS7A-217ENST00000543537 TATP17735 454 aaPredicted RBP15.33■□□□□ 0.04
COPS7A-217ENST00000543537 SLC15A2Q16348 729 aa15.33■□□□□ 0.04
COPS7A-217ENST00000543537 SLC27A3Q5K4L6 730 aa15.33■□□□□ 0.04
COPS7A-217ENST00000543537 SPON1Q9HCB6 807 aa15.33■□□□□ 0.04
COPS7A-217ENST00000543537 MAP2P11137 1827 aaKnown RBP15.33■□□□□ 0.04
COPS7A-217ENST00000543537 USHBP1Q8N6Y0 703 aa15.32■□□□□ 0.04
COPS7A-217ENST00000543537 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.32■□□□□ 0.04
COPS7A-217ENST00000543537 PCDH11XQ9BZA7 1347 aa15.32■□□□□ 0.04
COPS7A-217ENST00000543537 PCDH11YQ9BZA8 1340 aa15.32■□□□□ 0.04
COPS7A-217ENST00000543537 PRIM1P49642 420 aaKnown RBP15.31■□□□□ 0.04
COPS7A-217ENST00000543537 STK32BQ9NY57 414 aa15.31■□□□□ 0.04
COPS7A-217ENST00000543537 PKD1L3Q7Z443 1732 aa15.31■□□□□ 0.04
COPS7A-217ENST00000543537 KAT6BQ8WYB5 2073 aa15.31■□□□□ 0.04
COPS7A-217ENST00000543537 AMER1Q5JTC6 1135 aaPredicted RBP15.3■□□□□ 0.04
COPS7A-217ENST00000543537 DOT1LQ8TEK3 1739 aa15.3■□□□□ 0.04
COPS7A-217ENST00000543537 EYA1Q99502 592 aa15.3■□□□□ 0.04
COPS7A-217ENST00000543537 LRRC4BQ9NT99 713 aa15.3■□□□□ 0.04
COPS7A-217ENST00000543537 CYP27B1O15528 508 aa15.29■□□□□ 0.04
COPS7A-217ENST00000543537 NKX1-1Q15270 411 aaPredicted RBP15.29■□□□□ 0.04
COPS7A-217ENST00000543537 PPM1GO15355 546 aaPredicted RBP15.28■□□□□ 0.04
COPS7A-217ENST00000543537 NGEFQ8N5V2 710 aa15.28■□□□□ 0.04
COPS7A-217ENST00000543537 AKT1S1Q96B36 256 aa15.28■□□□□ 0.04
COPS7A-217ENST00000543537 LY75O60449 1722 aa15.28■□□□□ 0.04
COPS7A-217ENST00000543537 PTGER2P43116 358 aa15.27■□□□□ 0.04
COPS7A-217ENST00000543537 EIF4A2Q14240 407 aaKnown RBP15.27■□□□□ 0.04
COPS7A-217ENST00000543537 PNISRQ8TF01 805 aaKnown RBP15.27■□□□□ 0.04
COPS7A-217ENST00000543537 PDGFDQ9GZP0 370 aaPredicted RBP15.27■□□□□ 0.04
COPS7A-217ENST00000543537 IGSF1Q8N6C5 1336 aa15.26■□□□□ 0.03
COPS7A-217ENST00000543537 QSER1Q2KHR3 1735 aa15.26■□□□□ 0.03
COPS7A-217ENST00000543537 HMGB2P26583 209 aaKnown RBP15.25■□□□□ 0.03
COPS7A-217ENST00000543537 ZNF827Q17R98 1081 aa15.25■□□□□ 0.03
COPS7A-217ENST00000543537 SYTL4Q96C24 671 aaPredicted RBP15.25■□□□□ 0.03
COPS7A-217ENST00000543537 SGIP1Q9BQI5 828 aa15.25■□□□□ 0.03
COPS7A-217ENST00000543537 MTFR1LQ9H019 292 aa15.25■□□□□ 0.03
COPS7A-217ENST00000543537 SPG7Q9UQ90 795 aa15.25■□□□□ 0.03
COPS7A-217ENST00000543537 MORC1Q86VD1 984 aa15.24■□□□□ 0.03
COPS7A-217ENST00000543537 ZBED9Q6R2W3 1325 aa15.23■□□□□ 0.03
COPS7A-217ENST00000543537 TNNT2P45379 298 aaPredicted RBP15.23■□□□□ 0.03
COPS7A-217ENST00000543537 HNRNPUQ00839 825 aaKnown RBP eCLIP15.23■□□□□ 0.03
COPS7A-217ENST00000543537 CC2D1BQ5T0F9 858 aaKnown RBP15.23■□□□□ 0.03
COPS7A-217ENST00000543537 FAM9BQ8IZU0 186 aa15.23■□□□□ 0.03
COPS7A-217ENST00000543537 SLC16A10Q8TF71 515 aa15.23■□□□□ 0.03
COPS7A-217ENST00000543537 ZBTB7AO95365 584 aa15.22■□□□□ 0.03
COPS7A-217ENST00000543537 TOGARAM1Q9Y4F4 1720 aa15.22■□□□□ 0.03
COPS7A-217ENST00000543537 IFNL2Q8IZJ0 200 aa15.21■□□□□ 0.03
COPS7A-217ENST00000543537 PPP1R1BQ9UD71 204 aaPredicted RBP15.21■□□□□ 0.03
COPS7A-217ENST00000543537 CCNL1Q9UK58 526 aaPredicted RBP15.21■□□□□ 0.03
COPS7A-217ENST00000543537 KDRP35968 1356 aa15.21■□□□□ 0.02
COPS7A-217ENST00000543537 COL24A1Q17RW2 1714 aa15.2■□□□□ 0.02
COPS7A-217ENST00000543537 PHKG2P15735 406 aa15.2■□□□□ 0.02
COPS7A-217ENST00000543537 PPP2R1AP30153 589 aa15.2■□□□□ 0.02
COPS7A-217ENST00000543537 SMARCC1Q92922 1105 aaPredicted RBP15.2■□□□□ 0.02
COPS7A-217ENST00000543537 CFAP53Q96M91 514 aa15.2■□□□□ 0.02
COPS7A-217ENST00000543537 PALLDQ8WX93 1383 aa15.2■□□□□ 0.02
COPS7A-217ENST00000543537 PNPLA7Q6ZV29 1317 aa15.19■□□□□ 0.02
COPS7A-217ENST00000543537 PIGBQ92521 554 aa15.19■□□□□ 0.02
COPS7A-217ENST00000543537 MAP3K5Q99683 1374 aa15.19■□□□□ 0.02
COPS7A-217ENST00000543537 ITGB4P16144 1822 aa15.19■□□□□ 0.02
COPS7A-217ENST00000543537 IL13P35225 146 aa15.18■□□□□ 0.02
COPS7A-217ENST00000543537 WDR43Q15061 677 aaKnown RBP eCLIP15.18■□□□□ 0.02
COPS7A-217ENST00000543537 AMOTQ4VCS5 1084 aa15.18■□□□□ 0.02
COPS7A-217ENST00000543537 MPRIPQ6WCQ1 1025 aa15.18■□□□□ 0.02
COPS7A-217ENST00000543537 ATF5Q9Y2D1 282 aaPredicted RBP15.18■□□□□ 0.02
COPS7A-217ENST00000543537 KCNQ4P56696 695 aa15.17■□□□□ 0.02
COPS7A-217ENST00000543537 TFCP2L1Q9NZI6 479 aa15.17■□□□□ 0.02
COPS7A-217ENST00000543537 TUBGCP6Q96RT7 1819 aa15.16■□□□□ 0.02
COPS7A-217ENST00000543537 HSP90AB1P08238 724 aaKnown RBP15.16■□□□□ 0.02
COPS7A-217ENST00000543537 NCBP3Q53F19 620 aaKnown RBP15.16■□□□□ 0.02
COPS7A-217ENST00000543537 PLEKHO1Q53GL0 409 aaPredicted RBP15.16■□□□□ 0.02
COPS7A-217ENST00000543537 ERVV-2B6SEH9 535 aa15.15■□□□□ 0.02
COPS7A-217ENST00000543537 DCAF5Q96JK2 942 aa15.15■□□□□ 0.02
COPS7A-217ENST00000543537 PNNQ9H307 717 aaKnown RBP15.15■□□□□ 0.02
COPS7A-217ENST00000543537 C5P01031 1676 aa15.15■□□□□ 0.02
COPS7A-217ENST00000543537 TAF1LQ8IZX4 1826 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms