RNA–Protein interactions for RNA: ENST00000543469.1

TRIM59-208, Transcript of tripartite motif containing 59, humanhuman

TSL 5 BASIC

Gene TRIM59, Length 4,615 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-208ENST00000543469 CPDO75976 1380 aa10.07□□□□□ -0.8
TRIM59-208ENST00000543469 ANKRD26Q9UPS8 1709 aa10.07□□□□□ -0.8
TRIM59-208ENST00000543469 HOXB7P09629 217 aa10.07□□□□□ -0.8
TRIM59-208ENST00000543469 CARD10Q9BWT7 1032 aa10.07□□□□□ -0.8
TRIM59-208ENST00000543469 TWISTNBQ3B726 338 aaPredicted RBP10.06□□□□□ -0.8
TRIM59-208ENST00000543469 EYA1Q99502 592 aa10.06□□□□□ -0.8
TRIM59-208ENST00000543469 TMOD3Q9NYL9 352 aa10.06□□□□□ -0.8
TRIM59-208ENST00000543469 BTBD11A6QL63 1104 aa10.06□□□□□ -0.8
TRIM59-208ENST00000543469 MYOM1P52179 1685 aa10.06□□□□□ -0.8
TRIM59-208ENST00000543469 ZRANB1Q9UGI0 708 aa10.05□□□□□ -0.8
TRIM59-208ENST00000543469 MON2Q7Z3U7 1717 aa10.05□□□□□ -0.8
TRIM59-208ENST00000543469 WDR17Q8IZU2 1322 aa10.05□□□□□ -0.8
TRIM59-208ENST00000543469 DZIP1LQ8IYY4 767 aaKnown RBP10.05□□□□□ -0.8
TRIM59-208ENST00000543469 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.05□□□□□ -0.8
TRIM59-208ENST00000543469 ADAMTS2O95450 1211 aa10.05□□□□□ -0.8
TRIM59-208ENST00000543469 STARD3NLO95772 234 aa10.04□□□□□ -0.8
TRIM59-208ENST00000543469 CCT4P50991 539 aaKnown RBP10.04□□□□□ -0.8
TRIM59-208ENST00000543469 CASC1Q6TDU7 716 aa10.04□□□□□ -0.8
TRIM59-208ENST00000543469 FMNL2Q96PY5 1086 aa10.04□□□□□ -0.8
TRIM59-208ENST00000543469 ITPRIPQ8IWB1 547 aa10.04□□□□□ -0.8
TRIM59-208ENST00000543469 AKAP12Q02952 1782 aa10.04□□□□□ -0.8
TRIM59-208ENST00000543469 PTPRCP08575 1304 aa10.04□□□□□ -0.8
TRIM59-208ENST00000543469 CD163L1Q9NR16 1453 aa10.03□□□□□ -0.8
TRIM59-208ENST00000543469 GNAI3P08754 354 aa10.03□□□□□ -0.8
TRIM59-208ENST00000543469 CCDC184Q52MB2 194 aa10.03□□□□□ -0.8
TRIM59-208ENST00000543469 ZNF772Q68DY9 489 aaPredicted RBP10.03□□□□□ -0.8
TRIM59-208ENST00000543469 A0A087WZG4 1122 aa10.03□□□□□ -0.8
TRIM59-208ENST00000543469 EXOSC9Q06265 439 aaKnown RBP10.03□□□□□ -0.8
TRIM59-208ENST00000543469 SF3B2Q13435 895 aaKnown RBP10.03□□□□□ -0.8
TRIM59-208ENST00000543469 HSP90AB4PQ58FF6 505 aa10.03□□□□□ -0.8
TRIM59-208ENST00000543469 KIF6Q6ZMV9 814 aa10.03□□□□□ -0.8
TRIM59-208ENST00000543469 NPHP1O15259 732 aa10.03□□□□□ -0.8
TRIM59-208ENST00000543469 DDB1Q16531 1140 aa10.03□□□□□ -0.8
TRIM59-208ENST00000543469 ARHGAP45Q92619 1136 aa10.03□□□□□ -0.8
TRIM59-208ENST00000543469 TOPAZ1Q8N9V7 1692 aa10.03□□□□□ -0.8
TRIM59-208ENST00000543469 KIAA0232Q92628 1395 aa10.03□□□□□ -0.8
TRIM59-208ENST00000543469 ERVV-2B6SEH9 535 aa10.02□□□□□ -0.8
TRIM59-208ENST00000543469 CHRNA2Q15822 529 aa10.02□□□□□ -0.8
TRIM59-208ENST00000543469 ARXQ96QS3 562 aa10.02□□□□□ -0.8
TRIM59-208ENST00000543469 BTG4Q9NY30 223 aa10.02□□□□□ -0.8
TRIM59-208ENST00000543469 HDGFL1Q5TGJ6 251 aa10.02□□□□□ -0.81
TRIM59-208ENST00000543469 ERICH6Q7L0X2 663 aa10.02□□□□□ -0.81
TRIM59-208ENST00000543469 ERBB3P21860 1342 aa10.02□□□□□ -0.81
TRIM59-208ENST00000543469 HYPKQ9NX55 129 aa10.02□□□□□ -0.81
TRIM59-208ENST00000543469 HSP90AB3PQ58FF7 597 aa10.02□□□□□ -0.81
TRIM59-208ENST00000543469 DDX54Q8TDD1 881 aaKnown RBP10.02□□□□□ -0.81
TRIM59-208ENST00000543469 SSH2Q76I76 1423 aa10.01□□□□□ -0.81
TRIM59-208ENST00000543469 TMX4Q9H1E5 349 aaPredicted RBP10.01□□□□□ -0.81
TRIM59-208ENST00000543469 TRPC5Q9UL62 973 aaPredicted RBP10.01□□□□□ -0.81
TRIM59-208ENST00000543469 FANCIQ9NVI1 1328 aa10.01□□□□□ -0.81
TRIM59-208ENST00000543469 GPATCH3Q96I76 525 aa10.01□□□□□ -0.81
TRIM59-208ENST00000543469 NALCNQ8IZF0 1738 aa10.01□□□□□ -0.81
TRIM59-208ENST00000543469 OS9Q13438 667 aaPredicted RBP10□□□□□ -0.81
TRIM59-208ENST00000543469 RNMTO43148 476 aaKnown RBP10□□□□□ -0.81
TRIM59-208ENST00000543469 FKBP5Q13451 457 aaPredicted RBP10□□□□□ -0.81
TRIM59-208ENST00000543469 SNRPA1P09661 255 aaKnown RBP10□□□□□ -0.81
TRIM59-208ENST00000543469 MTHFSDQ2M296 383 aaKnown RBP10□□□□□ -0.81
TRIM59-208ENST00000543469 CENPQQ7L2Z9 268 aaPredicted RBP10□□□□□ -0.81
TRIM59-208ENST00000543469 SYTL4Q96C24 671 aaPredicted RBP10□□□□□ -0.81
TRIM59-208ENST00000543469 C8orf37Q96NL8 207 aa10□□□□□ -0.81
TRIM59-208ENST00000543469 CABLES1Q8TDN4 633 aa9.99□□□□□ -0.81
TRIM59-208ENST00000543469 USP35Q9P2H5 1018 aa9.99□□□□□ -0.81
TRIM59-208ENST00000543469 DBF4Q9UBU7 674 aaPredicted RBP9.99□□□□□ -0.81
TRIM59-208ENST00000543469 ERBB4Q15303 1308 aa9.99□□□□□ -0.81
TRIM59-208ENST00000543469 CRB1P82279 1406 aa9.99□□□□□ -0.81
TRIM59-208ENST00000543469 OVOS2A0A0G2JMS6 1433 aa9.99□□□□□ -0.81
TRIM59-208ENST00000543469 ZNF652Q9Y2D9 606 aa9.99□□□□□ -0.81
TRIM59-208ENST00000543469 MED1Q15648 1581 aaPredicted RBP9.99□□□□□ -0.81
TRIM59-208ENST00000543469 EIF2S2P20042 333 aaKnown RBP9.98□□□□□ -0.81
TRIM59-208ENST00000543469 DUSP27Q5VZP5 1158 aa9.98□□□□□ -0.81
TRIM59-208ENST00000543469 UNC5CLQ8IV45 518 aa9.98□□□□□ -0.81
TRIM59-208ENST00000543469 USHBP1Q8N6Y0 703 aa9.98□□□□□ -0.81
TRIM59-208ENST00000543469 USP21Q9UK80 565 aa9.98□□□□□ -0.81
TRIM59-208ENST00000543469 RIC3Q7Z5B4 369 aa9.98□□□□□ -0.81
TRIM59-208ENST00000543469 SLIT3O75094 1523 aa9.98□□□□□ -0.81
TRIM59-208ENST00000543469 ATF7IPQ6VMQ6 1270 aa9.98□□□□□ -0.81
TRIM59-208ENST00000543469 PLEKHF1Q96S99 279 aa9.97□□□□□ -0.81
TRIM59-208ENST00000543469 NBPF6Q5VWK0 638 aa9.97□□□□□ -0.81
TRIM59-208ENST00000543469 NBPF4Q96M43 638 aa9.97□□□□□ -0.81
TRIM59-208ENST00000543469 KDRP35968 1356 aa9.97□□□□□ -0.81
TRIM59-208ENST00000543469 C9orf78Q9NZ63 289 aaPredicted RBP9.97□□□□□ -0.81
TRIM59-208ENST00000543469 LARP1Q6PKG0 1096 aaKnown RBP9.97□□□□□ -0.81
TRIM59-208ENST00000543469 MCM10Q7L590 875 aa9.97□□□□□ -0.81
TRIM59-208ENST00000543469 AEBP1Q8IUX7 1158 aa9.96□□□□□ -0.81
TRIM59-208ENST00000543469 SLC4A10Q6U841 1118 aa9.96□□□□□ -0.81
TRIM59-208ENST00000543469 RBM42Q9BTD8 480 aaKnown RBP9.96□□□□□ -0.81
TRIM59-208ENST00000543469 MBIPQ9NS73 344 aa9.96□□□□□ -0.82
TRIM59-208ENST00000543469 CHL1O00533 1208 aa9.95□□□□□ -0.82
TRIM59-208ENST00000543469 RARSP54136 660 aaKnown RBP9.95□□□□□ -0.82
TRIM59-208ENST00000543469 MPRIPQ6WCQ1 1025 aa9.95□□□□□ -0.82
TRIM59-208ENST00000543469 CDCA7LQ96GN5 454 aa9.95□□□□□ -0.82
TRIM59-208ENST00000543469 SRCIN1Q9C0H9 1055 aa9.95□□□□□ -0.82
TRIM59-208ENST00000543469 SLC52A2Q9HAB3 445 aa9.95□□□□□ -0.82
TRIM59-208ENST00000543469 SLC4A2P04920 1241 aa9.95□□□□□ -0.82
TRIM59-208ENST00000543469 PHKG2P15735 406 aa9.95□□□□□ -0.82
TRIM59-208ENST00000543469 TAF7LQ5H9L4 462 aa9.95□□□□□ -0.82
TRIM59-208ENST00000543469 ERC1Q8IUD2 1116 aa9.95□□□□□ -0.82
TRIM59-208ENST00000543469 ELL2O00472 640 aaPredicted RBP9.94□□□□□ -0.82
TRIM59-208ENST00000543469 LRRFIP1Q32MZ4 808 aaKnown RBP9.94□□□□□ -0.82
TRIM59-208ENST00000543469 TSR2Q969E8 191 aaKnown RBP9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms