RNA–Protein interactions for RNA: ENST00000543462.1

VEGFB-204, Transcript of vascular endothelial growth factor B, humanhuman

TSL 2

Gene VEGFB, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFB-204ENST00000543462 RREB1Q92766 1687 aa13.43□□□□□ -0.26
VEGFB-204ENST00000543462 KRT27Q7Z3Y8 459 aa13.42□□□□□ -0.26
VEGFB-204ENST00000543462 MYBBP1AQ9BQG0 1328 aaKnown RBP13.41□□□□□ -0.26
VEGFB-204ENST00000543462 DLG5Q8TDM6 1919 aa13.41□□□□□ -0.26
VEGFB-204ENST00000543462 DDB1Q16531 1140 aa13.4□□□□□ -0.26
VEGFB-204ENST00000543462 AEBP1Q8IUX7 1158 aa13.4□□□□□ -0.26
VEGFB-204ENST00000543462 MARCH10Q8NA82 808 aaPredicted RBP13.4□□□□□ -0.26
VEGFB-204ENST00000543462 SIPA1L3O60292 1781 aaPredicted RBP13.4□□□□□ -0.26
VEGFB-204ENST00000543462 SOCS7O14512 581 aa13.39□□□□□ -0.27
VEGFB-204ENST00000543462 DIAPH1O60610 1272 aaKnown RBP13.39□□□□□ -0.27
VEGFB-204ENST00000543462 CNGB1Q14028 1251 aaPredicted RBP13.39□□□□□ -0.27
VEGFB-204ENST00000543462 LY75O60449 1722 aa13.39□□□□□ -0.27
VEGFB-204ENST00000543462 NUP188Q5SRE5 1749 aa13.37□□□□□ -0.27
VEGFB-204ENST00000543462 UPF1Q92900 1129 aaKnown RBP eCLIP13.37□□□□□ -0.27
VEGFB-204ENST00000543462 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.37□□□□□ -0.27
VEGFB-204ENST00000543462 PAPPAQ13219 1627 aa13.37□□□□□ -0.27
VEGFB-204ENST00000543462 MRC1P22897 1456 aa13.36□□□□□ -0.27
VEGFB-204ENST00000543462 A0A0G2JS52 829 aa13.36□□□□□ -0.27
VEGFB-204ENST00000543462 MYT1Q01538 1121 aa13.36□□□□□ -0.27
VEGFB-204ENST00000543462 FAM182BQ5T319 152 aa13.36□□□□□ -0.27
VEGFB-204ENST00000543462 RAPGEF4Q8WZA2 1011 aa13.36□□□□□ -0.27
VEGFB-204ENST00000543462 EXOC5O00471 708 aa13.35□□□□□ -0.27
VEGFB-204ENST00000543462 CYP27B1O15528 508 aa13.35□□□□□ -0.27
VEGFB-204ENST00000543462 TATP17735 454 aaPredicted RBP13.35□□□□□ -0.27
VEGFB-204ENST00000543462 ZCRB1Q8TBF4 217 aaKnown RBP13.35□□□□□ -0.27
VEGFB-204ENST00000543462 CFAP53Q96M91 514 aa13.35□□□□□ -0.27
VEGFB-204ENST00000543462 KDM6AO15550 1401 aaPredicted RBP13.35□□□□□ -0.27
VEGFB-204ENST00000543462 PCDH11XQ9BZA7 1347 aa13.35□□□□□ -0.27
VEGFB-204ENST00000543462 PCDH11YQ9BZA8 1340 aa13.35□□□□□ -0.27
VEGFB-204ENST00000543462 CICQ96RK0 1608 aaPredicted RBP13.35□□□□□ -0.27
VEGFB-204ENST00000543462 PDE3BQ13370 1112 aa13.34□□□□□ -0.27
VEGFB-204ENST00000543462 SULT6B1Q6IMI4 303 aa13.34□□□□□ -0.27
VEGFB-204ENST00000543462 FAM196AQ6ZSG2 479 aa13.34□□□□□ -0.27
VEGFB-204ENST00000543462 RSPH6AQ9H0K4 717 aa13.34□□□□□ -0.27
VEGFB-204ENST00000543462 KAT6BQ8WYB5 2073 aa13.34□□□□□ -0.27
VEGFB-204ENST00000543462 NKX1-1Q15270 411 aaPredicted RBP13.33□□□□□ -0.28
VEGFB-204ENST00000543462 ZNF831Q5JPB2 1677 aa13.33□□□□□ -0.28
VEGFB-204ENST00000543462 UBR2Q8IWV8 1755 aa13.32□□□□□ -0.28
VEGFB-204ENST00000543462 TAF1LQ8IZX4 1826 aa13.32□□□□□ -0.28
VEGFB-204ENST00000543462 HMOX1P09601 288 aa13.31□□□□□ -0.28
VEGFB-204ENST00000543462 PHKG2P15735 406 aa13.3□□□□□ -0.28
VEGFB-204ENST00000543462 CCDC184Q52MB2 194 aa13.3□□□□□ -0.28
VEGFB-204ENST00000543462 PTF1AQ7RTS3 328 aa13.3□□□□□ -0.28
VEGFB-204ENST00000543462 SPG7Q9UQ90 795 aa13.3□□□□□ -0.28
VEGFB-204ENST00000543462 AMOTQ4VCS5 1084 aa13.29□□□□□ -0.28
VEGFB-204ENST00000543462 CCDC125Q86Z20 511 aa13.29□□□□□ -0.28
VEGFB-204ENST00000543462 PLEKHF1Q96S99 279 aa13.29□□□□□ -0.28
VEGFB-204ENST00000543462 COL5A3P25940 1745 aaPredicted RBP13.28□□□□□ -0.28
VEGFB-204ENST00000543462 QSER1Q2KHR3 1735 aa13.28□□□□□ -0.28
VEGFB-204ENST00000543462 TUBGCP6Q96RT7 1819 aa13.28□□□□□ -0.28
VEGFB-204ENST00000543462 U2SURPO15042 1029 aaKnown RBP13.28□□□□□ -0.28
VEGFB-204ENST00000543462 FCHSD2O94868 740 aa13.28□□□□□ -0.28
VEGFB-204ENST00000543462 DDX54Q8TDD1 881 aaKnown RBP13.28□□□□□ -0.28
VEGFB-204ENST00000543462 NUDCQ9Y266 331 aa13.28□□□□□ -0.28
VEGFB-204ENST00000543462 C5P01031 1676 aa13.28□□□□□ -0.28
VEGFB-204ENST00000543462 KDM3BQ7LBC6 1761 aa13.27□□□□□ -0.28
VEGFB-204ENST00000543462 KCNQ2O43526 872 aa13.27□□□□□ -0.29
VEGFB-204ENST00000543462 TRIM37O94972 964 aa13.27□□□□□ -0.29
VEGFB-204ENST00000543462 U2AF1L5P0DN76 240 aaPredicted RBP13.27□□□□□ -0.29
VEGFB-204ENST00000543462 PRKAR2BP31323 418 aa13.27□□□□□ -0.29
VEGFB-204ENST00000543462 U2AF1Q01081 240 aaKnown RBP eCLIP13.27□□□□□ -0.29
VEGFB-204ENST00000543462 MTHFSDQ2M296 383 aaKnown RBP13.27□□□□□ -0.29
VEGFB-204ENST00000543462 PLEKHO1Q53GL0 409 aaPredicted RBP13.27□□□□□ -0.29
VEGFB-204ENST00000543462 PHACTR3Q96KR7 559 aa13.27□□□□□ -0.29
VEGFB-204ENST00000543462 BCL11BQ9C0K0 894 aaPredicted RBP13.27□□□□□ -0.29
VEGFB-204ENST00000543462 TJP1Q07157 1748 aa13.27□□□□□ -0.29
VEGFB-204ENST00000543462 ANP32CO43423 234 aa13.26□□□□□ -0.29
VEGFB-204ENST00000543462 ZNF530Q6P9A1 599 aaPredicted RBP13.26□□□□□ -0.29
VEGFB-204ENST00000543462 IFNL2Q8IZJ0 200 aa13.26□□□□□ -0.29
VEGFB-204ENST00000543462 CEMIPQ8WUJ3 1361 aa13.26□□□□□ -0.29
VEGFB-204ENST00000543462 MAP3K5Q99683 1374 aa13.25□□□□□ -0.29
VEGFB-204ENST00000543462 AKAP4Q5JQC9 854 aa13.24□□□□□ -0.29
VEGFB-204ENST00000543462 CAMKK2Q96RR4 588 aa13.24□□□□□ -0.29
VEGFB-204ENST00000543462 KCPQ6ZWJ8 1503 aa13.23□□□□□ -0.29
VEGFB-204ENST00000543462 DEFB132Q7Z7B7 95 aa13.23□□□□□ -0.29
VEGFB-204ENST00000543462 ACSBG1Q96GR2 724 aa13.23□□□□□ -0.29
VEGFB-204ENST00000543462 DCAF5Q96JK2 942 aa13.23□□□□□ -0.29
VEGFB-204ENST00000543462 CASZ1Q86V15 1759 aa13.22□□□□□ -0.29
VEGFB-204ENST00000543462 PLSCR1O15162 318 aa13.22□□□□□ -0.29
VEGFB-204ENST00000543462 HSP90AB1P08238 724 aaKnown RBP13.22□□□□□ -0.29
VEGFB-204ENST00000543462 PRIM1P49642 420 aaKnown RBP13.22□□□□□ -0.29
VEGFB-204ENST00000543462 GAS2L2Q8NHY3 880 aa13.22□□□□□ -0.29
VEGFB-204ENST00000543462 PNISRQ8TF01 805 aaKnown RBP13.22□□□□□ -0.29
VEGFB-204ENST00000543462 UBR3Q6ZT12 1888 aa13.21□□□□□ -0.29
VEGFB-204ENST00000543462 ERVV-2B6SEH9 535 aa13.21□□□□□ -0.29
VEGFB-204ENST00000543462 ADAMTS8Q9UP79 889 aa13.21□□□□□ -0.29
VEGFB-204ENST00000543462 LAMB4A4D0S4 1761 aa13.2□□□□□ -0.3
VEGFB-204ENST00000543462 BAG6P46379 1132 aa13.2□□□□□ -0.3
VEGFB-204ENST00000543462 C1orf141Q5JVX7 400 aa13.2□□□□□ -0.3
VEGFB-204ENST00000543462 PROM2Q8N271 834 aa13.2□□□□□ -0.3
VEGFB-204ENST00000543462 MYH14Q7Z406 1995 aaKnown RBP13.2□□□□□ -0.3
VEGFB-204ENST00000543462 C4BP0C0L5 1744 aa13.19□□□□□ -0.3
VEGFB-204ENST00000543462 COL24A1Q17RW2 1714 aa13.19□□□□□ -0.3
VEGFB-204ENST00000543462 RNMTO43148 476 aaKnown RBP13.19□□□□□ -0.3
VEGFB-204ENST00000543462 APBA3O96018 575 aa13.19□□□□□ -0.3
VEGFB-204ENST00000543462 EN1Q05925 392 aaPredicted RBP13.19□□□□□ -0.3
VEGFB-204ENST00000543462 MPRIPQ6WCQ1 1025 aa13.19□□□□□ -0.3
VEGFB-204ENST00000543462 IL17REQ8NFR9 667 aa13.19□□□□□ -0.3
VEGFB-204ENST00000543462 PIGBQ92521 554 aa13.19□□□□□ -0.3
VEGFB-204ENST00000543462 LGR6Q9HBX8 967 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms