RNA–Protein interactions for RNA: ENST00000543460.1

C16orf62-217, Transcript of UPF0505 protein C16orf62, humanhuman

TSL 2

Gene C16orf62, Length 557 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C16orf62-217ENST00000543460 NCBP3Q53F19 620 aaKnown RBP13.03□□□□□ -0.32
C16orf62-217ENST00000543460 FAM196AQ6ZSG2 479 aa13.03□□□□□ -0.32
C16orf62-217ENST00000543460 ZCRB1Q8TBF4 217 aaKnown RBP13.03□□□□□ -0.32
C16orf62-217ENST00000543460 USP35Q9P2H5 1018 aa13.03□□□□□ -0.32
C16orf62-217ENST00000543460 BRWD3Q6RI45 1802 aa13.03□□□□□ -0.32
C16orf62-217ENST00000543460 PCDH11XQ9BZA7 1347 aa13.03□□□□□ -0.32
C16orf62-217ENST00000543460 PCDH11YQ9BZA8 1340 aa13.03□□□□□ -0.32
C16orf62-217ENST00000543460 HSP90AB1P08238 724 aaKnown RBP13.02□□□□□ -0.33
C16orf62-217ENST00000543460 PLEKHO1Q53GL0 409 aaPredicted RBP13.02□□□□□ -0.33
C16orf62-217ENST00000543460 MEGF6O75095 1541 aa13.02□□□□□ -0.33
C16orf62-217ENST00000543460 HMGB2P26583 209 aaKnown RBP13.01□□□□□ -0.33
C16orf62-217ENST00000543460 SULT6B1Q6IMI4 303 aa13.01□□□□□ -0.33
C16orf62-217ENST00000543460 SHANK3Q9BYB0 1731 aa13□□□□□ -0.33
C16orf62-217ENST00000543460 DIEXFQ68CQ4 756 aaKnown RBP13□□□□□ -0.33
C16orf62-217ENST00000543460 RSPH6AQ9H0K4 717 aa13□□□□□ -0.33
C16orf62-217ENST00000543460 HTATSF1O43719 755 aaKnown RBP12.99□□□□□ -0.33
C16orf62-217ENST00000543460 NEFMP07197 916 aa12.99□□□□□ -0.33
C16orf62-217ENST00000543460 U2AF1L5P0DN76 240 aaPredicted RBP12.99□□□□□ -0.33
C16orf62-217ENST00000543460 U2AF1Q01081 240 aaKnown RBP eCLIP12.99□□□□□ -0.33
C16orf62-217ENST00000543460 IFNL2Q8IZJ0 200 aa12.99□□□□□ -0.33
C16orf62-217ENST00000543460 NGEFQ8N5V2 710 aa12.99□□□□□ -0.33
C16orf62-217ENST00000543460 U2SURPO15042 1029 aaKnown RBP12.98□□□□□ -0.33
C16orf62-217ENST00000543460 GAS2L2Q8NHY3 880 aa12.98□□□□□ -0.33
C16orf62-217ENST00000543460 ADAMTS7Q9UKP4 1686 aa12.97□□□□□ -0.33
C16orf62-217ENST00000543460 WDR43Q15061 677 aaKnown RBP eCLIP12.97□□□□□ -0.33
C16orf62-217ENST00000543460 AKAP4Q5JQC9 854 aa12.97□□□□□ -0.33
C16orf62-217ENST00000543460 MARCH10Q8NA82 808 aaPredicted RBP12.97□□□□□ -0.33
C16orf62-217ENST00000543460 PNISRQ8TF01 805 aaKnown RBP12.97□□□□□ -0.33
C16orf62-217ENST00000543460 DCAF5Q96JK2 942 aa12.97□□□□□ -0.33
C16orf62-217ENST00000543460 A0A0G2JS52 829 aa12.96□□□□□ -0.33
C16orf62-217ENST00000543460 MYT1Q01538 1121 aa12.96□□□□□ -0.33
C16orf62-217ENST00000543460 CNGB1Q14028 1251 aaPredicted RBP12.96□□□□□ -0.33
C16orf62-217ENST00000543460 USHBP1Q8N6Y0 703 aa12.96□□□□□ -0.33
C16orf62-217ENST00000543460 PLEKHF1Q96S99 279 aa12.96□□□□□ -0.33
C16orf62-217ENST00000543460 SBF2Q86WG5 1849 aa12.96□□□□□ -0.33
C16orf62-217ENST00000543460 RGPD3A6NKT7 1758 aaPredicted RBP12.96□□□□□ -0.34
C16orf62-217ENST00000543460 RGPD4Q7Z3J3 1758 aa12.96□□□□□ -0.34
C16orf62-217ENST00000543460 ERVV-2B6SEH9 535 aa12.95□□□□□ -0.34
C16orf62-217ENST00000543460 CYP27B1O15528 508 aa12.95□□□□□ -0.34
C16orf62-217ENST00000543460 PHKG2P15735 406 aa12.95□□□□□ -0.34
C16orf62-217ENST00000543460 AEBP1Q8IUX7 1158 aa12.95□□□□□ -0.34
C16orf62-217ENST00000543460 NHSQ6T4R5 1651 aa12.94□□□□□ -0.34
C16orf62-217ENST00000543460 PRKAR2BP31323 418 aa12.94□□□□□ -0.34
C16orf62-217ENST00000543460 C1orf141Q5JVX7 400 aa12.94□□□□□ -0.34
C16orf62-217ENST00000543460 BCL11BQ9C0K0 894 aaPredicted RBP12.94□□□□□ -0.34
C16orf62-217ENST00000543460 MRS2Q9HD23 443 aa12.94□□□□□ -0.34
C16orf62-217ENST00000543460 HMOX1P09601 288 aa12.93□□□□□ -0.34
C16orf62-217ENST00000543460 ILDR2Q71H61 639 aa12.93□□□□□ -0.34
C16orf62-217ENST00000543460 RUNDC1Q96C34 613 aa12.93□□□□□ -0.34
C16orf62-217ENST00000543460 SCN11AQ9UI33 1791 aa12.92□□□□□ -0.34
C16orf62-217ENST00000543460 PLSCR1O15162 318 aa12.92□□□□□ -0.34
C16orf62-217ENST00000543460 LMOD3Q0VAK6 560 aa12.92□□□□□ -0.34
C16orf62-217ENST00000543460 ZNF530Q6P9A1 599 aaPredicted RBP12.92□□□□□ -0.34
C16orf62-217ENST00000543460 ADAMTS8Q9UP79 889 aa12.92□□□□□ -0.34
C16orf62-217ENST00000543460 MRC1P22897 1456 aa12.91□□□□□ -0.34
C16orf62-217ENST00000543460 MAPK8IP3Q9UPT6 1336 aa12.91□□□□□ -0.34
C16orf62-217ENST00000543460 GNAT3A8MTJ3 354 aa12.91□□□□□ -0.34
C16orf62-217ENST00000543460 MTHFSDQ2M296 383 aaKnown RBP12.91□□□□□ -0.34
C16orf62-217ENST00000543460 DDX54Q8TDD1 881 aaKnown RBP12.91□□□□□ -0.34
C16orf62-217ENST00000543460 CEMIPQ8WUJ3 1361 aa12.91□□□□□ -0.34
C16orf62-217ENST00000543460 MAP3K5Q99683 1374 aa12.91□□□□□ -0.34
C16orf62-217ENST00000543460 SOCS7O14512 581 aa12.9□□□□□ -0.34
C16orf62-217ENST00000543460 NFE2L2Q16236 605 aa12.9□□□□□ -0.34
C16orf62-217ENST00000543460 BABAM1Q9NWV8 329 aa12.9□□□□□ -0.34
C16orf62-217ENST00000543460 KAT6BQ8WYB5 2073 aa12.9□□□□□ -0.34
C16orf62-217ENST00000543460 ZNF831Q5JPB2 1677 aa12.89□□□□□ -0.35
C16orf62-217ENST00000543460 TNS1Q9HBL0 1735 aaKnown RBP12.89□□□□□ -0.35
C16orf62-217ENST00000543460 CCDC27Q2M243 656 aa12.89□□□□□ -0.35
C16orf62-217ENST00000543460 UPF1Q92900 1129 aaKnown RBP eCLIP12.89□□□□□ -0.35
C16orf62-217ENST00000543460 PHACTR3Q96KR7 559 aa12.89□□□□□ -0.35
C16orf62-217ENST00000543460 EP400Q96L91 3159 aa12.89□□□□□ -0.35
C16orf62-217ENST00000543460 ITGB4P16144 1822 aa12.88□□□□□ -0.35
C16orf62-217ENST00000543460 SF3B2Q13435 895 aaKnown RBP12.88□□□□□ -0.35
C16orf62-217ENST00000543460 SMARCC1Q92922 1105 aaPredicted RBP12.88□□□□□ -0.35
C16orf62-217ENST00000543460 VIRMAQ69YN4 1812 aaKnown RBP12.88□□□□□ -0.35
C16orf62-217ENST00000543460 DOT1LQ8TEK3 1739 aa12.88□□□□□ -0.35
C16orf62-217ENST00000543460 TMPOP42166 694 aaKnown RBP12.87□□□□□ -0.35
C16orf62-217ENST00000543460 RTF1Q92541 710 aaKnown RBP12.87□□□□□ -0.35
C16orf62-217ENST00000543460 KDM6AO15550 1401 aaPredicted RBP12.87□□□□□ -0.35
C16orf62-217ENST00000543460 DLG5Q8TDM6 1919 aa12.86□□□□□ -0.35
C16orf62-217ENST00000543460 TOGARAM1Q9Y4F4 1720 aa12.86□□□□□ -0.35
C16orf62-217ENST00000543460 RNMTO43148 476 aaKnown RBP12.86□□□□□ -0.35
C16orf62-217ENST00000543460 BAG6P46379 1132 aa12.86□□□□□ -0.35
C16orf62-217ENST00000543460 CALD1Q05682 793 aaKnown RBP12.86□□□□□ -0.35
C16orf62-217ENST00000543460 CCDC184Q52MB2 194 aa12.86□□□□□ -0.35
C16orf62-217ENST00000543460 SLC52A2Q9HAB3 445 aa12.86□□□□□ -0.35
C16orf62-217ENST00000543460 CICQ96RK0 1608 aaPredicted RBP12.86□□□□□ -0.35
C16orf62-217ENST00000543460 BTAF1O14981 1849 aa12.85□□□□□ -0.35
C16orf62-217ENST00000543460 SIPA1L3O60292 1781 aaPredicted RBP12.85□□□□□ -0.35
C16orf62-217ENST00000543460 PRIM1P49642 420 aaKnown RBP12.85□□□□□ -0.35
C16orf62-217ENST00000543460 SLC27A3Q5K4L6 730 aa12.85□□□□□ -0.35
C16orf62-217ENST00000543460 TMOD3Q9NYL9 352 aa12.85□□□□□ -0.35
C16orf62-217ENST00000543460 TRIM37O94972 964 aa12.84□□□□□ -0.35
C16orf62-217ENST00000543460 CABP4P57796 275 aa12.84□□□□□ -0.35
C16orf62-217ENST00000543460 IL17REQ8NFR9 667 aa12.84□□□□□ -0.35
C16orf62-217ENST00000543460 LY75O60449 1722 aa12.84□□□□□ -0.35
C16orf62-217ENST00000543460 RIPK4P57078 832 aa12.83□□□□□ -0.36
C16orf62-217ENST00000543460 VSIG10Q8N0Z9 540 aa12.83□□□□□ -0.36
C16orf62-217ENST00000543460 MIER1Q8N108 512 aa12.83□□□□□ -0.36
C16orf62-217ENST00000543460 PAPPAQ13219 1627 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms