RNA–Protein interactions for RNA: ENST00000543162.1

DDB1-221, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-221ENST00000543162 DLG5Q8TDM6 1919 aa13.98□□□□□ -0.17
DDB1-221ENST00000543162 GOLGA2Q08379 1002 aa13.98□□□□□ -0.17
DDB1-221ENST00000543162 UNC5CLQ8IV45 518 aa13.98□□□□□ -0.17
DDB1-221ENST00000543162 WDR63Q8IWG1 891 aa13.98□□□□□ -0.17
DDB1-221ENST00000543162 USP35Q9P2H5 1018 aa13.98□□□□□ -0.17
DDB1-221ENST00000543162 MEGF6O75095 1541 aa13.98□□□□□ -0.17
DDB1-221ENST00000543162 ZNF530Q6P9A1 599 aaPredicted RBP13.97□□□□□ -0.17
DDB1-221ENST00000543162 FNBP4Q8N3X1 1017 aaPredicted RBP13.97□□□□□ -0.17
DDB1-221ENST00000543162 SPG7Q9UQ90 795 aa13.97□□□□□ -0.17
DDB1-221ENST00000543162 PARP4Q9UKK3 1724 aaKnown RBP13.96□□□□□ -0.17
DDB1-221ENST00000543162 IL2RBP14784 551 aa13.96□□□□□ -0.17
DDB1-221ENST00000543162 RTF1Q92541 710 aaKnown RBP13.96□□□□□ -0.17
DDB1-221ENST00000543162 CDCA7LQ96GN5 454 aa13.96□□□□□ -0.17
DDB1-221ENST00000543162 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.96□□□□□ -0.17
DDB1-221ENST00000543162 CCDC9Q9Y3X0 531 aaKnown RBP13.96□□□□□ -0.17
DDB1-221ENST00000543162 MAP3K5Q99683 1374 aa13.96□□□□□ -0.18
DDB1-221ENST00000543162 BCL9LQ86UU0 1499 aa13.95□□□□□ -0.18
DDB1-221ENST00000543162 GNAT3A8MTJ3 354 aa13.95□□□□□ -0.18
DDB1-221ENST00000543162 HTATSF1O43719 755 aaKnown RBP13.95□□□□□ -0.18
DDB1-221ENST00000543162 CALD1Q05682 793 aaKnown RBP13.95□□□□□ -0.18
DDB1-221ENST00000543162 C1orf141Q5JVX7 400 aa13.95□□□□□ -0.18
DDB1-221ENST00000543162 USP21Q9UK80 565 aa13.95□□□□□ -0.18
DDB1-221ENST00000543162 OVOS2A0A0G2JMS6 1433 aa13.95□□□□□ -0.18
DDB1-221ENST00000543162 SPATA31A1Q5TZJ5 1347 aa13.94□□□□□ -0.18
DDB1-221ENST00000543162 SPATA31A5Q5VU36 1347 aa13.94□□□□□ -0.18
DDB1-221ENST00000543162 SPATA31A7Q8IWB4 1347 aa13.94□□□□□ -0.18
DDB1-221ENST00000543162 E9PSI1 815 aa13.94□□□□□ -0.18
DDB1-221ENST00000543162 AKAP4Q5JQC9 854 aa13.94□□□□□ -0.18
DDB1-221ENST00000543162 THRAP3Q9Y2W1 955 aaKnown RBP13.94□□□□□ -0.18
DDB1-221ENST00000543162 AFF2P51816 1311 aa13.93□□□□□ -0.18
DDB1-221ENST00000543162 IL16Q14005 1332 aa13.93□□□□□ -0.18
DDB1-221ENST00000543162 PKD1L3Q7Z443 1732 aa13.93□□□□□ -0.18
DDB1-221ENST00000543162 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.93□□□□□ -0.18
DDB1-221ENST00000543162 SLFN5Q08AF3 891 aa13.93□□□□□ -0.18
DDB1-221ENST00000543162 DCTN1Q14203 1278 aa13.93□□□□□ -0.18
DDB1-221ENST00000543162 VPS72Q15906 364 aa13.93□□□□□ -0.18
DDB1-221ENST00000543162 MCM10Q7L590 875 aa13.93□□□□□ -0.18
DDB1-221ENST00000543162 ZCRB1Q8TBF4 217 aaKnown RBP13.93□□□□□ -0.18
DDB1-221ENST00000543162 THUMPD2Q9BTF0 503 aaKnown RBP13.93□□□□□ -0.18
DDB1-221ENST00000543162 CDCA7Q9BWT1 371 aaPredicted RBP13.92□□□□□ -0.18
DDB1-221ENST00000543162 MYH16Q9H6N6 1097 aa13.92□□□□□ -0.18
DDB1-221ENST00000543162 SPINK5Q9NQ38 1064 aaPredicted RBP13.92□□□□□ -0.18
DDB1-221ENST00000543162 DISP2A7MBM2 1401 aa13.91□□□□□ -0.18
DDB1-221ENST00000543162 IFNL2Q8IZJ0 200 aa13.91□□□□□ -0.18
DDB1-221ENST00000543162 PCDH11XQ9BZA7 1347 aa13.9□□□□□ -0.18
DDB1-221ENST00000543162 PCDH11YQ9BZA8 1340 aa13.9□□□□□ -0.18
DDB1-221ENST00000543162 WNK3Q9BYP7 1800 aa13.9□□□□□ -0.18
DDB1-221ENST00000543162 PHKG2P15735 406 aa13.9□□□□□ -0.18
DDB1-221ENST00000543162 DUSP27Q5VZP5 1158 aa13.9□□□□□ -0.18
DDB1-221ENST00000543162 BARGINQ6ZT62 677 aa13.9□□□□□ -0.18
DDB1-221ENST00000543162 TRMT2AQ8IZ69 625 aaKnown RBP13.9□□□□□ -0.18
DDB1-221ENST00000543162 IL17REQ8NFR9 667 aa13.9□□□□□ -0.18
DDB1-221ENST00000543162 LAS1LQ9Y4W2 734 aaKnown RBP13.9□□□□□ -0.18
DDB1-221ENST00000543162 CYP27B1O15528 508 aa13.89□□□□□ -0.19
DDB1-221ENST00000543162 GNAI1P63096 354 aa13.89□□□□□ -0.19
DDB1-221ENST00000543162 MPRIPQ6WCQ1 1025 aa13.89□□□□□ -0.19
DDB1-221ENST00000543162 IFT57Q9NWB7 429 aa13.89□□□□□ -0.19
DDB1-221ENST00000543162 EXOC5O00471 708 aa13.88□□□□□ -0.19
DDB1-221ENST00000543162 RNMTO43148 476 aaKnown RBP13.88□□□□□ -0.19
DDB1-221ENST00000543162 HSP90AB1P08238 724 aaKnown RBP13.88□□□□□ -0.19
DDB1-221ENST00000543162 DDX54Q8TDD1 881 aaKnown RBP13.88□□□□□ -0.19
DDB1-221ENST00000543162 CFAP44Q96MT7 982 aa13.88□□□□□ -0.19
DDB1-221ENST00000543162 TRPC5Q9UL62 973 aaPredicted RBP13.88□□□□□ -0.19
DDB1-221ENST00000543162 LRRC37A3O60309 1634 aa13.87□□□□□ -0.19
DDB1-221ENST00000543162 CEMIPQ8WUJ3 1361 aa13.87□□□□□ -0.19
DDB1-221ENST00000543162 ZNF853P0CG23 659 aa13.87□□□□□ -0.19
DDB1-221ENST00000543162 FAM98CQ17RN3 349 aaKnown RBP13.87□□□□□ -0.19
DDB1-221ENST00000543162 TSR2Q969E8 191 aaKnown RBP13.87□□□□□ -0.19
DDB1-221ENST00000543162 LGR6Q9HBX8 967 aa13.87□□□□□ -0.19
DDB1-221ENST00000543162 ATRNO75882 1429 aa13.87□□□□□ -0.19
DDB1-221ENST00000543162 FANCIQ9NVI1 1328 aa13.87□□□□□ -0.19
DDB1-221ENST00000543162 SHANK3Q9BYB0 1731 aa13.87□□□□□ -0.19
DDB1-221ENST00000543162 TEFQ10587 303 aa13.86□□□□□ -0.19
DDB1-221ENST00000543162 DDB1Q16531 1140 aa13.86□□□□□ -0.19
DDB1-221ENST00000543162 DCAF5Q96JK2 942 aa13.86□□□□□ -0.19
DDB1-221ENST00000543162 GJD4Q96KN9 370 aaPredicted RBP13.86□□□□□ -0.19
DDB1-221ENST00000543162 TNS2Q63HR2 1409 aa13.86□□□□□ -0.19
DDB1-221ENST00000543162 VIRMAQ69YN4 1812 aaKnown RBP13.85□□□□□ -0.19
DDB1-221ENST00000543162 ADAMTS7Q9UKP4 1686 aa13.85□□□□□ -0.19
DDB1-221ENST00000543162 KDM6AO15550 1401 aaPredicted RBP13.85□□□□□ -0.19
DDB1-221ENST00000543162 CHL1O00533 1208 aa13.85□□□□□ -0.19
DDB1-221ENST00000543162 TAF7Q15545 349 aaPredicted RBP13.85□□□□□ -0.19
DDB1-221ENST00000543162 QTRT2Q9H974 415 aaKnown RBP13.85□□□□□ -0.19
DDB1-221ENST00000543162 MBIPQ9NS73 344 aa13.85□□□□□ -0.19
DDB1-221ENST00000543162 SCN11AQ9UI33 1791 aa13.85□□□□□ -0.19
DDB1-221ENST00000543162 A0A0G2JS52 829 aa13.84□□□□□ -0.19
DDB1-221ENST00000543162 MYT1Q01538 1121 aa13.84□□□□□ -0.19
DDB1-221ENST00000543162 NKX1-1Q15270 411 aaPredicted RBP13.84□□□□□ -0.19
DDB1-221ENST00000543162 ZNF772Q68DY9 489 aaPredicted RBP13.84□□□□□ -0.19
DDB1-221ENST00000543162 TSPYL4Q9UJ04 414 aa13.84□□□□□ -0.19
DDB1-221ENST00000543162 GLI3P10071 1580 aa13.83□□□□□ -0.19
DDB1-221ENST00000543162 BABAM1Q9NWV8 329 aa13.83□□□□□ -0.2
DDB1-221ENST00000543162 EXOSC9Q06265 439 aaKnown RBP13.82□□□□□ -0.2
DDB1-221ENST00000543162 SLC52A2Q9HAB3 445 aa13.82□□□□□ -0.2
DDB1-221ENST00000543162 MIS18AQ9NYP9 233 aa13.82□□□□□ -0.2
DDB1-221ENST00000543162 RCAN3Q9UKA8 241 aa13.82□□□□□ -0.2
DDB1-221ENST00000543162 ERVV-2B6SEH9 535 aa13.81□□□□□ -0.2
DDB1-221ENST00000543162 CABP4P57796 275 aa13.81□□□□□ -0.2
DDB1-221ENST00000543162 THSD7AQ9UPZ6 1657 aa13.81□□□□□ -0.2
DDB1-221ENST00000543162 MRC1P22897 1456 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms